Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 AL353692.3-201ENST00000407031 1396 ntBASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 GUSBP12-201ENST00000513727 720 ntBASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 Z69720.1-201ENST00000601483 472 ntBASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 AL163051.1-201ENST00000569214 1512 ntBASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 AC138894.3-201ENST00000603787 634 ntBASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 AC124864.1-201ENST00000623408 392 ntBASIC23.06■■□□□ 1.28
SH3TC1Q8TE82 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 IGHV3-47-201ENST00000425060 335 ntBASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC23.05■■□□□ 1.28
SH3TC1Q8TE82 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 AL161938.1-201ENST00000569833 2180 ntBASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 LINC01711-201ENST00000598340 967 ntBASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 AL031008.1-201ENST00000619963 541 ntBASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SH3TC1Q8TE82 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
SH3TC1Q8TE82 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms