RNA–Protein interactions for RNA: ENST00000499601.2

AC008393.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008393.1, Length 1,454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008393.1-201ENST00000499601 NISCHQ9Y2I1 1504 aa43.09■■■■■ 4.49
AC008393.1-201ENST00000499601 CCDC180Q9P1Z9 1646 aa37.94■■■■□ 3.66
AC008393.1-201ENST00000499601 ABCC9O60706 1549 aa36.22■■■■□ 3.39
AC008393.1-201ENST00000499601 ZCCHC6Q5VYS8 1495 aaKnown RBP36.09■■■■□ 3.37
AC008393.1-201ENST00000499601 DCAF1Q9Y4B6 1507 aa35.72■■■■□ 3.31
AC008393.1-201ENST00000499601 DCAF8L2P0C7V8 631 aa35.63■■■■□ 3.29
AC008393.1-201ENST00000499601 MYO15BQ96JP2 1530 aa35.54■■■■□ 3.28
AC008393.1-201ENST00000499601 NACADO15069 1562 aa35.45■■■■□ 3.27
AC008393.1-201ENST00000499601 RB1CC1Q8TDY2 1594 aa35.27■■■■□ 3.24
AC008393.1-201ENST00000499601 SCRIBQ14160 1630 aa34.67■■■■□ 3.14
AC008393.1-201ENST00000499601 SHROOM4Q9ULL8 1493 aa34.57■■■■□ 3.12
AC008393.1-201ENST00000499601 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
AC008393.1-201ENST00000499601 BICRAQ9NZM4 1560 aa34.13■■■■□ 3.05
AC008393.1-201ENST00000499601 PABPN1Q86U42 306 aaKnown RBP eCLIP33.98■■■■□ 3.03
AC008393.1-201ENST00000499601 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
AC008393.1-201ENST00000499601 BAZ1AQ9NRL2 1556 aaPredicted RBP33.36■■■□□ 2.93
AC008393.1-201ENST00000499601 SMARCA4P51532 1647 aa33.25■■■□□ 2.91
AC008393.1-201ENST00000499601 MROH2BQ7Z745 1585 aa33.21■■■□□ 2.91
AC008393.1-201ENST00000499601 EIF4G1Q04637 1599 aaKnown RBP33.18■■■□□ 2.9
AC008393.1-201ENST00000499601 RSF1Q96T23 1441 aaPredicted RBP33.16■■■□□ 2.9
AC008393.1-201ENST00000499601 DNAJC5BQ9UF47 199 aa33.05■■■□□ 2.88
AC008393.1-201ENST00000499601 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
AC008393.1-201ENST00000499601 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
AC008393.1-201ENST00000499601 WIZO95785 1651 aa32.91■■■□□ 2.86
AC008393.1-201ENST00000499601 SMARCA2P51531 1590 aa32.86■■■□□ 2.85
AC008393.1-201ENST00000499601 ATAD2BQ9ULI0 1458 aa32.83■■■□□ 2.85
AC008393.1-201ENST00000499601 CC2D2AQ9P2K1 1620 aa32.82■■■□□ 2.84
AC008393.1-201ENST00000499601 NCAPD3P42695 1498 aa32.68■■■□□ 2.82
AC008393.1-201ENST00000499601 BAZ1BQ9UIG0 1483 aaKnown RBP32.63■■■□□ 2.81
AC008393.1-201ENST00000499601 TOP2AP11388 1531 aaKnown RBP32.63■■■□□ 2.81
AC008393.1-201ENST00000499601 HMGXB3Q12766 1538 aa32.63■■■□□ 2.81
AC008393.1-201ENST00000499601 CCDC88BA6NC98 1476 aa32.22■■■□□ 2.75
AC008393.1-201ENST00000499601 CADPSQ9ULU8 1353 aa31.78■■■□□ 2.68
AC008393.1-201ENST00000499601 CFTRP13569 1480 aa31.78■■■□□ 2.68
AC008393.1-201ENST00000499601 LAMC3Q9Y6N6 1575 aa31.7■■■□□ 2.67
AC008393.1-201ENST00000499601 PRDM2Q13029 1718 aa31.65■■■□□ 2.66
AC008393.1-201ENST00000499601 NESP48681 1621 aa31.6■■■□□ 2.65
AC008393.1-201ENST00000499601 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
AC008393.1-201ENST00000499601 FANCD2Q9BXW9 1451 aa31.42■■■□□ 2.62
AC008393.1-201ENST00000499601 CHIC1Q5VXU3 224 aa31.32■■■□□ 2.6
AC008393.1-201ENST00000499601 ABCC8Q09428 1581 aa31.31■■■□□ 2.6
AC008393.1-201ENST00000499601 CEP164Q9UPV0 1460 aa31.31■■■□□ 2.6
AC008393.1-201ENST00000499601 KIF21AQ7Z4S6 1674 aa31.28■■■□□ 2.6
AC008393.1-201ENST00000499601 WRNQ14191 1432 aaPredicted RBP eCLIP31.26■■■□□ 2.59
AC008393.1-201ENST00000499601 ERCC6Q03468 1493 aa31.18■■■□□ 2.58
AC008393.1-201ENST00000499601 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
AC008393.1-201ENST00000499601 DNAJC5Q9H3Z4 198 aa31.12■■■□□ 2.57
AC008393.1-201ENST00000499601 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
AC008393.1-201ENST00000499601 CUX1P39880 1505 aa31.11■■■□□ 2.57
AC008393.1-201ENST00000499601 TOP2BQ02880 1626 aa31.1■■■□□ 2.57
AC008393.1-201ENST00000499601 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
AC008393.1-201ENST00000499601 DNMBPQ6XZF7 1577 aa31.07■■■□□ 2.56
AC008393.1-201ENST00000499601 MRC2Q9UBG0 1479 aa31.07■■■□□ 2.56
AC008393.1-201ENST00000499601 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
AC008393.1-201ENST00000499601 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
AC008393.1-201ENST00000499601 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.55
AC008393.1-201ENST00000499601 WDR62O43379 1518 aa30.93■■■□□ 2.54
AC008393.1-201ENST00000499601 FGD5Q6ZNL6 1462 aa30.87■■■□□ 2.53
AC008393.1-201ENST00000499601 POLA1P09884 1462 aaPredicted RBP30.81■■■□□ 2.52
AC008393.1-201ENST00000499601 SOGA1O94964 1423 aa30.7■■■□□ 2.5
AC008393.1-201ENST00000499601 RAD54L2Q9Y4B4 1467 aa30.65■■■□□ 2.5
AC008393.1-201ENST00000499601 CUX2O14529 1486 aa30.64■■■□□ 2.5
AC008393.1-201ENST00000499601 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
AC008393.1-201ENST00000499601 IFT140Q96RY7 1462 aa30.61■■■□□ 2.49
AC008393.1-201ENST00000499601 TARBP1Q13395 1621 aaKnown RBP30.6■■■□□ 2.49
AC008393.1-201ENST00000499601 WDR97A6NE52 1622 aa30.58■■■□□ 2.49
AC008393.1-201ENST00000499601 EEA1Q15075 1411 aa30.58■■■□□ 2.49
AC008393.1-201ENST00000499601 KIF27Q86VH2 1401 aa30.54■■■□□ 2.48
AC008393.1-201ENST00000499601 RUSC2Q8N2Y8 1516 aa30.49■■■□□ 2.47
AC008393.1-201ENST00000499601 FAM9AQ8IZU1 332 aaPredicted RBP30.45■■■□□ 2.47
AC008393.1-201ENST00000499601 ABCA5Q8WWZ7 1642 aa30.42■■■□□ 2.46
AC008393.1-201ENST00000499601 TDRD9Q8NDG6 1382 aaKnown RBP30.4■■■□□ 2.46
AC008393.1-201ENST00000499601 CSRNP3Q8WYN3 585 aa30.37■■■□□ 2.45
AC008393.1-201ENST00000499601 GAPVD1Q14C86 1478 aa30.37■■■□□ 2.45
AC008393.1-201ENST00000499601 ZNF608Q9ULD9 1512 aaPredicted RBP30.35■■■□□ 2.45
AC008393.1-201ENST00000499601 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.44
AC008393.1-201ENST00000499601 EIF4G3O43432 1585 aaKnown RBP30.31■■■□□ 2.44
AC008393.1-201ENST00000499601 ERICH3Q5RHP9 1530 aa30.29■■■□□ 2.44
AC008393.1-201ENST00000499601 IGF1RP08069 1367 aa30.27■■■□□ 2.44
AC008393.1-201ENST00000499601 PBRM1Q86U86 1689 aa30.26■■■□□ 2.43
AC008393.1-201ENST00000499601 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
AC008393.1-201ENST00000499601 CUL7Q14999 1698 aa30.2■■■□□ 2.43
AC008393.1-201ENST00000499601 KIF21BO75037 1637 aa30.18■■■□□ 2.42
AC008393.1-201ENST00000499601 PRXQ9BXM0 1461 aa30.16■■■□□ 2.42
AC008393.1-201ENST00000499601 CARMIL1Q5VZK9 1371 aa30.14■■■□□ 2.42
AC008393.1-201ENST00000499601 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
AC008393.1-201ENST00000499601 GOLGA3Q08378 1498 aa30.07■■■□□ 2.41
AC008393.1-201ENST00000499601 SNAPC4Q5SXM2 1469 aa30.07■■■□□ 2.41
AC008393.1-201ENST00000499601 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
AC008393.1-201ENST00000499601 RAPGEF2Q9Y4G8 1499 aa30.07■■■□□ 2.4
AC008393.1-201ENST00000499601 FHAD1B1AJZ9 1412 aa30.06■■■□□ 2.4
AC008393.1-201ENST00000499601 LOC105371045A0A1W2PR82 267 aa30.01■■■□□ 2.4
AC008393.1-201ENST00000499601 EHMT2Q96KQ7 1210 aa29.97■■■□□ 2.39
AC008393.1-201ENST00000499601 SYNJ2O15056 1496 aa29.94■■■□□ 2.38
AC008393.1-201ENST00000499601 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
AC008393.1-201ENST00000499601 TNIKQ9UKE5 1360 aa29.86■■■□□ 2.37
AC008393.1-201ENST00000499601 CHMP7Q8WUX9 453 aaPredicted RBP29.86■■■□□ 2.37
AC008393.1-201ENST00000499601 GRIN2AQ12879 1464 aa29.85■■■□□ 2.37
AC008393.1-201ENST00000499601 FBLN2P98095 1184 aa29.79■■■□□ 2.36
AC008393.1-201ENST00000499601 CHD1O14646 1710 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms