Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT78Q8N1N4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 AP000593.1-201ENST00000393668 712 ntBASIC17.9■□□□□ 0.46
KRT78Q8N1N4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 KRT18P41-201ENST00000518924 1277 ntBASIC17.9■□□□□ 0.46
KRT78Q8N1N4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 AC036111.1-201ENST00000533973 1582 ntBASIC17.9■□□□□ 0.46
KRT78Q8N1N4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
KRT78Q8N1N4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
KRT78Q8N1N4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
KRT78Q8N1N4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
KRT78Q8N1N4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
KRT78Q8N1N4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
KRT78Q8N1N4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 AL512604.3-201ENST00000569583 964 ntBASIC17.89■□□□□ 0.45
KRT78Q8N1N4 WWOX-216ENST00000569818 525 ntBASIC17.89■□□□□ 0.45
KRT78Q8N1N4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.89■□□□□ 0.45
KRT78Q8N1N4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 OR6D1P-202ENST00000641007 5290 ntBASIC17.88■□□□□ 0.45
KRT78Q8N1N4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 AC090164.3-201ENST00000610780 2143 ntBASIC17.88■□□□□ 0.45
KRT78Q8N1N4 CR769767.2-201ENST00000622735 460 ntBASIC17.88■□□□□ 0.45
KRT78Q8N1N4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 AC073592.3-201ENST00000625118 1834 ntBASIC17.88■□□□□ 0.45
KRT78Q8N1N4 LINC01568-207ENST00000641790 1380 ntBASIC17.88■□□□□ 0.45
KRT78Q8N1N4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
KRT78Q8N1N4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 AC005082.1-201ENST00000413042 2259 ntBASIC17.87■□□□□ 0.45
KRT78Q8N1N4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
KRT78Q8N1N4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms