Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SH3TC1Q8TE82 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 AL121772.3-201ENST00000610840 674 ntBASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SH3TC1Q8TE82 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 FDX1P1-201ENST00000449115 551 ntBASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 FOSL1P1-201ENST00000511041 816 ntBASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 KRT18P41-201ENST00000518924 1277 ntBASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 AC233702.3-201ENST00000578656 1387 ntBASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 KRT89P-201ENST00000620027 1478 ntBASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH3TC1Q8TE82 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 KRT17P6-201ENST00000453795 1220 ntBASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 AC104819.1-201ENST00000504587 486 ntBASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 AC091304.2-201ENST00000564639 760 ntBASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 AL592071.1-201ENST00000611956 408 ntBASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.1■■□□□ 1.29
SH3TC1Q8TE82 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.09■■□□□ 1.29
SH3TC1Q8TE82 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 EMBP1-201ENST00000458200 901 ntBASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 RN7SL606P-201ENST00000472779 293 ntBASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 KRT18P31-201ENST00000506277 1292 ntBASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 AC074051.2-201ENST00000565115 352 ntBASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 LINC00167-201ENST00000530583 1419 ntBASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SH3TC1Q8TE82 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 AP000593.1-201ENST00000393668 712 ntBASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SH3TC1Q8TE82 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH3TC1Q8TE82 KRT8P10-201ENST00000450021 1447 ntBASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms