Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 AC107956.1-201ENST00000494359 873 ntBASIC19.45■□□□□ 0.7
RFX6Q8HWS3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 RCC2P3-201ENST00000418112 1537 ntBASIC19.45■□□□□ 0.7
RFX6Q8HWS3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 AL499627.1-201ENST00000569373 2188 ntBASIC19.44■□□□□ 0.7
RFX6Q8HWS3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFX6Q8HWS3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 NUDT16P1-203ENST00000513809 620 ntBASIC19.43■□□□□ 0.7
RFX6Q8HWS3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 SLC25A1P4-201ENST00000567977 778 ntBASIC19.43■□□□□ 0.7
RFX6Q8HWS3 AC113410.3-201ENST00000623366 203 ntBASIC19.43■□□□□ 0.7
RFX6Q8HWS3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFX6Q8HWS3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 ABHD17AP1-201ENST00000358206 933 ntBASIC19.42■□□□□ 0.7
RFX6Q8HWS3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RFX6Q8HWS3 AL357033.4-201ENST00000617703 1807 ntBASIC19.41■□□□□ 0.7
RFX6Q8HWS3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 AC007613.1-201ENST00000572811 2597 ntBASIC19.41■□□□□ 0.7
RFX6Q8HWS3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 AC012618.2-201ENST00000428058 849 ntBASIC19.41■□□□□ 0.7
RFX6Q8HWS3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.41■□□□□ 0.7
RFX6Q8HWS3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms