Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
SNAP47Q5SQN1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 IER3-202ENST00000376377 1350 ntBASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNAP47Q5SQN1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNAP47Q5SQN1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.14■□□□□ 0.5
SNAP47Q5SQN1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNAP47Q5SQN1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNAP47Q5SQN1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 AL023284.2-201ENST00000405850 579 ntBASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.14■□□□□ 0.49
SNAP47Q5SQN1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 MCCD1P1-208ENST00000445732 328 ntBASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 VENTXP5-201ENST00000523979 775 ntBASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 AC024243.1-201ENST00000609234 778 ntBASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.13■□□□□ 0.49
SNAP47Q5SQN1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 BX323043.1-201ENST00000641006 1765 ntBASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms