Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 AC092368.3-202ENST00000574180 1591 ntBASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 MIPEPP3-201ENST00000412105 444 ntBASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 AL050303.2-201ENST00000619798 666 ntBASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 HLA-B-256ENST00000639848 1089 ntBASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMEM56-RWDD3S4R434 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 AC093677.2-201ENST00000600169 1863 ntBASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TMEM56-RWDD3S4R434 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AC091874.3-201ENST00000512672 1195 ntBASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AC092118.2-201ENST00000613495 667 ntBASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AC138028.4-201ENST00000564984 1845 ntBASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TMEM56-RWDD3S4R434 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms