Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AL157400.5-201ENST00000507624 621 ntBASIC23.68■■□□□ 1.38
CHD6Q8TD26 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.67■■□□□ 1.38
CHD6Q8TD26 AC026202.3-201ENST00000600805 1127 ntBASIC23.67■■□□□ 1.38
CHD6Q8TD26 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHD6Q8TD26 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.66■■□□□ 1.38
CHD6Q8TD26 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHD6Q8TD26 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CHD6Q8TD26 AC005837.3-201ENST00000612163 286 ntBASIC23.66■■□□□ 1.38
CHD6Q8TD26 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.65■■□□□ 1.38
CHD6Q8TD26 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHD6Q8TD26 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD6Q8TD26 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.64■■□□□ 1.37
CHD6Q8TD26 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHD6Q8TD26 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHD6Q8TD26 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHD6Q8TD26 AC139795.1-202ENST00000500444 432 ntBASIC23.63■■□□□ 1.37
CHD6Q8TD26 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD6Q8TD26 MIR219A2-201ENST00000608502 1504 ntBASIC23.62■■□□□ 1.37
CHD6Q8TD26 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD6Q8TD26 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD6Q8TD26 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.61■■□□□ 1.37
CHD6Q8TD26 AL031848.2-201ENST00000607670 837 ntBASIC23.61■■□□□ 1.37
CHD6Q8TD26 PVT1_1.1-201ENST00000615125 194 ntBASIC23.6■■□□□ 1.37
CHD6Q8TD26 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD6Q8TD26 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD6Q8TD26 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD6Q8TD26 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD6Q8TD26 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD6Q8TD26 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD6Q8TD26 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CHD6Q8TD26 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CHD6Q8TD26 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHD6Q8TD26 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD6Q8TD26 AC110285.6-201ENST00000617652 491 ntBASIC23.57■■□□□ 1.36
CHD6Q8TD26 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CHD6Q8TD26 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.57■■□□□ 1.36
CHD6Q8TD26 RAP2CP1-202ENST00000605179 643 ntBASIC23.57■■□□□ 1.36
CHD6Q8TD26 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CHD6Q8TD26 ZNRF2P3-201ENST00000424200 374 ntBASIC23.56■■□□□ 1.36
CHD6Q8TD26 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.56■■□□□ 1.36
CHD6Q8TD26 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.56■■□□□ 1.36
CHD6Q8TD26 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHD6Q8TD26 MIR5787-201ENST00000611784 55 ntBASIC23.55■■□□□ 1.36
CHD6Q8TD26 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD6Q8TD26 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.55■■□□□ 1.36
CHD6Q8TD26 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHD6Q8TD26 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD6Q8TD26 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHD6Q8TD26 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHD6Q8TD26 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHD6Q8TD26 AC120057.4-201ENST00000624722 1615 ntBASIC23.53■■□□□ 1.36
CHD6Q8TD26 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC23.53■■□□□ 1.36
CHD6Q8TD26 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.53■■□□□ 1.36
CHD6Q8TD26 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
CHD6Q8TD26 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.52■■□□□ 1.36
CHD6Q8TD26 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.52■■□□□ 1.36
CHD6Q8TD26 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD6Q8TD26 AC131281.2-201ENST00000520478 145 ntBASIC23.51■■□□□ 1.35
CHD6Q8TD26 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
CHD6Q8TD26 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CHD6Q8TD26 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.51■■□□□ 1.35
CHD6Q8TD26 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD6Q8TD26 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CHD6Q8TD26 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.5■■□□□ 1.35
CHD6Q8TD26 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.5■■□□□ 1.35
CHD6Q8TD26 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.49■■□□□ 1.35
CHD6Q8TD26 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.49■■□□□ 1.35
CHD6Q8TD26 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.48■■□□□ 1.35
CHD6Q8TD26 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.48■■□□□ 1.35
CHD6Q8TD26 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.47■■□□□ 1.35
CHD6Q8TD26 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD6Q8TD26 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
CHD6Q8TD26 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.46■■□□□ 1.35
CHD6Q8TD26 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.46■■□□□ 1.35
CHD6Q8TD26 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CHD6Q8TD26 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
CHD6Q8TD26 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.45■■□□□ 1.34
CHD6Q8TD26 AC135279.3-201ENST00000610945 1311 ntBASIC23.44■■□□□ 1.34
CHD6Q8TD26 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CHD6Q8TD26 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.44■■□□□ 1.34
CHD6Q8TD26 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CHD6Q8TD26 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms