Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L15-201ENST00000611059 1267 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L23-201ENST00000615195 1269 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L24-201ENST00000617576 1269 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L22-201ENST00000618238 1269 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L20-201ENST00000619712 1269 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L21-201ENST00000622058 1269 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L10-201ENST00000622460 1267 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 CR559946.2-201ENST00000623684 991 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L25-201ENST00000624915 1269 ntBASIC29.58■■■□□ 2.33
SMARCC2Q8TAQ2 AC016575.1-201ENST00000607026 382 ntBASIC29.57■■■□□ 2.32
SMARCC2Q8TAQ2 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.57■■■□□ 2.32
SMARCC2Q8TAQ2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SMARCC2Q8TAQ2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SMARCC2Q8TAQ2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
SMARCC2Q8TAQ2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
SMARCC2Q8TAQ2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SMARCC2Q8TAQ2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SMARCC2Q8TAQ2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
SMARCC2Q8TAQ2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMARCC2Q8TAQ2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMARCC2Q8TAQ2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMARCC2Q8TAQ2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SMARCC2Q8TAQ2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.54■■■□□ 2.32
SMARCC2Q8TAQ2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 AC018358.1-201ENST00000631079 1402 ntBASIC29.53■■■□□ 2.32
SMARCC2Q8TAQ2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SMARCC2Q8TAQ2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SMARCC2Q8TAQ2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SMARCC2Q8TAQ2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.52■■■□□ 2.32
SMARCC2Q8TAQ2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.32
SMARCC2Q8TAQ2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.51■■■□□ 2.32
SMARCC2Q8TAQ2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.51■■■□□ 2.31
SMARCC2Q8TAQ2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SMARCC2Q8TAQ2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCC2Q8TAQ2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.5■■■□□ 2.31
SMARCC2Q8TAQ2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.5■■■□□ 2.31
SMARCC2Q8TAQ2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCC2Q8TAQ2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.5■■■□□ 2.31
SMARCC2Q8TAQ2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCC2Q8TAQ2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SMARCC2Q8TAQ2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
SMARCC2Q8TAQ2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SMARCC2Q8TAQ2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SMARCC2Q8TAQ2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMARCC2Q8TAQ2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SMARCC2Q8TAQ2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMARCC2Q8TAQ2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
SMARCC2Q8TAQ2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SMARCC2Q8TAQ2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
SMARCC2Q8TAQ2 MIR639-201ENST00000384974 98 ntBASIC29.47■■■□□ 2.31
SMARCC2Q8TAQ2 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.46■■■□□ 2.31
SMARCC2Q8TAQ2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SMARCC2Q8TAQ2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SMARCC2Q8TAQ2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
SMARCC2Q8TAQ2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC2Q8TAQ2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
SMARCC2Q8TAQ2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC2Q8TAQ2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC2Q8TAQ2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC2Q8TAQ2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SMARCC2Q8TAQ2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
SMARCC2Q8TAQ2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.43■■■□□ 2.3
SMARCC2Q8TAQ2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
SMARCC2Q8TAQ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.43■■■□□ 2.3
SMARCC2Q8TAQ2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.42■■■□□ 2.3
SMARCC2Q8TAQ2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCC2Q8TAQ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.42■■■□□ 2.3
SMARCC2Q8TAQ2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
SMARCC2Q8TAQ2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
SMARCC2Q8TAQ2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC29.41■■■□□ 2.3
SMARCC2Q8TAQ2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCC2Q8TAQ2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCC2Q8TAQ2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
SMARCC2Q8TAQ2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCC2Q8TAQ2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.39■■■□□ 2.3
SMARCC2Q8TAQ2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
SMARCC2Q8TAQ2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCC2Q8TAQ2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
SMARCC2Q8TAQ2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
SMARCC2Q8TAQ2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCC2Q8TAQ2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCC2Q8TAQ2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCC2Q8TAQ2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
SMARCC2Q8TAQ2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
SMARCC2Q8TAQ2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
SMARCC2Q8TAQ2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
SMARCC2Q8TAQ2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
SMARCC2Q8TAQ2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.35■■■□□ 2.29
SMARCC2Q8TAQ2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.35■■■□□ 2.29
SMARCC2Q8TAQ2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.35■■■□□ 2.29
SMARCC2Q8TAQ2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
SMARCC2Q8TAQ2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SMARCC2Q8TAQ2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.34■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms