Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 AC087741.3-201ENST00000624270 1347 ntBASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.01■□□□□ 0.15
MRPL55Q7Z7F7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16■□□□□ 0.15
MRPL55Q7Z7F7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 AL162393.1-201ENST00000437852 946 ntBASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 AC018358.1-201ENST00000631079 1402 ntBASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MRPL55Q7Z7F7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC15.98■□□□□ 0.15
MRPL55Q7Z7F7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
MRPL55Q7Z7F7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MRPL55Q7Z7F7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRPL55Q7Z7F7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
MRPL55Q7Z7F7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
MRPL55Q7Z7F7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MRPL55Q7Z7F7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MRPL55Q7Z7F7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
MRPL55Q7Z7F7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
MRPL55Q7Z7F7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MRPL55Q7Z7F7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MRPL55Q7Z7F7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MRPL55Q7Z7F7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
MRPL55Q7Z7F7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms