Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 PET10YKR046C 852 nt7.72□□□□□ -1.17
YNL040WP53960 SEC24YIL109C 2781 nt7.72□□□□□ -1.17
YNL040WP53960 DCR2YLR361C 1737 nt7.72□□□□□ -1.17
YNL040WP53960 PRB1YEL060C 1908 nt7.72□□□□□ -1.17
YNL040WP53960 YDR215CYDR215C 414 nt7.71□□□□□ -1.18
YNL040WP53960 YPC1YBR183W 951 nt7.71□□□□□ -1.18
YNL040WP53960 CRN1YLR429W 1956 nt7.71□□□□□ -1.18
YNL040WP53960 HNM1YGL077C 1692 nt7.7□□□□□ -1.18
YNL040WP53960 CTF3YLR381W 2202 nt7.7□□□□□ -1.18
YNL040WP53960 PSA1YDL055C 1086 nt7.7□□□□□ -1.18
YNL040WP53960 DAL80YKR034W 810 nt7.7□□□□□ -1.18
YNL040WP53960 BNA3YJL060W 1335 nt7.7□□□□□ -1.18
YNL040WP53960 SPS1YDR523C 1473 nt7.69□□□□□ -1.18
YNL040WP53960 STS1YIR011C 960 nt7.68□□□□□ -1.18
YNL040WP53960 YJR142WYJR142W 1029 nt7.68□□□□□ -1.18
YNL040WP53960 PPZ2YDR436W 2133 nt7.67□□□□□ -1.18
YNL040WP53960 CDC23YHR166C 1881 nt7.67□□□□□ -1.18
YNL040WP53960 GET2YER083C 858 nt7.67□□□□□ -1.18
YNL040WP53960 CAR2YLR438W 1275 nt7.66□□□□□ -1.18
YNL040WP53960 YPT10YBR264C 600 nt7.66□□□□□ -1.18
YNL040WP53960 TOD6YBL054W 1578 nt7.66□□□□□ -1.18
YNL040WP53960 TCB1YOR086C 3561 nt7.65□□□□□ -1.18
YNL040WP53960 OPI1YHL020C 1215 nt7.65□□□□□ -1.18
YNL040WP53960 SNF7YLR025W 723 nt7.65□□□□□ -1.18
YNL040WP53960 AFG2YLR397C 2343 nt7.64□□□□□ -1.19
YNL040WP53960 BDS1YOL164W 1941 nt7.64□□□□□ -1.19
YNL040WP53960 TPI1YDR050C 747 nt7.64□□□□□ -1.19
YNL040WP53960 YLR358CYLR358C 564 nt7.64□□□□□ -1.19
YNL040WP53960 FRA1YLL029W 2250 nt7.64□□□□□ -1.19
YNL040WP53960 MAS2YHR024C 1449 nt7.63□□□□□ -1.19
YNL040WP53960 HRB1YNL004W 1365 nt7.63□□□□□ -1.19
YNL040WP53960 NMA2YGR010W 1188 nt7.63□□□□□ -1.19
YNL040WP53960 DSC3YOR223W 879 nt7.63□□□□□ -1.19
YNL040WP53960 FLC2YAL053W 2352 nt7.63□□□□□ -1.19
YNL040WP53960 OSM1YJR051W 1506 nt7.62□□□□□ -1.19
YNL040WP53960 CKI1YLR133W 1749 nt7.61□□□□□ -1.19
YNL040WP53960 MSI1YBR195C 1269 nt7.61□□□□□ -1.19
YNL040WP53960 GTS1YGL181W 1191 nt7.6□□□□□ -1.19
YNL040WP53960 RTG2YGL252C 1767 nt7.59□□□□□ -1.19
YNL040WP53960 SKP1YDR328C 585 nt7.59□□□□□ -1.19
YNL040WP53960 DOC1YGL240W 753 nt7.59□□□□□ -1.19
YNL040WP53960 YGL081WYGL081W 963 nt7.58□□□□□ -1.2
YNL040WP53960 PRY2YKR013W 990 nt7.58□□□□□ -1.2
YNL040WP53960 BAP3YDR046C 1815 nt7.57□□□□□ -1.2
YNL040WP53960 ENB1YOL158C 1821 nt7.57□□□□□ -1.2
YNL040WP53960 YNR001W-AYNR001W-A 219 nt7.57□□□□□ -1.2
YNL040WP53960 YAH1YPL252C 519 nt7.57□□□□□ -1.2
YNL040WP53960 RTC2YBR147W 891 nt7.57□□□□□ -1.2
YNL040WP53960 CAN1YEL063C 1773 nt7.56□□□□□ -1.2
YNL040WP53960 MSS51YLR203C 1311 nt7.56□□□□□ -1.2
YNL040WP53960 CDC3YLR314C 1563 nt7.56□□□□□ -1.2
YNL040WP53960 PIL1YGR086C 1020 nt7.56□□□□□ -1.2
YNL040WP53960 ADH6YMR318C 1083 nt7.56□□□□□ -1.2
YNL040WP53960 YIL108WYIL108W 2091 nt7.56□□□□□ -1.2
YNL040WP53960 HOG1YLR113W 1308 nt7.55□□□□□ -1.2
YNL040WP53960 RFS1YBR052C 633 nt7.55□□□□□ -1.2
YNL040WP53960 YGL260WYGL260W 231 nt7.53□□□□□ -1.2
YNL040WP53960 PIH1YHR034C 1035 nt7.53□□□□□ -1.2
YNL040WP53960 ATP23YNR020C 813 nt7.53□□□□□ -1.2
YNL040WP53960 NDE1YMR145C 1683 nt7.53□□□□□ -1.2
YNL040WP53960 AFG3YER017C 2286 nt7.52□□□□□ -1.21
YNL040WP53960 PRE5YMR314W 705 nt7.52□□□□□ -1.21
YNL040WP53960 YBL111CYBL111C 2004 nt7.52□□□□□ -1.21
YNL040WP53960 ERG24YNL280C 1317 nt7.52□□□□□ -1.21
YNL040WP53960 RSC4YKR008W 1878 nt7.51□□□□□ -1.21
YNL040WP53960 EXG2YDR261C 1689 nt7.51□□□□□ -1.21
YNL040WP53960 YNL040WYNL040W 1371 nt7.51□□□□□ -1.21
YNL040WP53960 CCW12YLR110C 402 nt7.51□□□□□ -1.21
YNL040WP53960 FCY2YER056C 1602 nt7.51□□□□□ -1.21
YNL040WP53960 YPL247CYPL247C 1572 nt7.5□□□□□ -1.21
YNL040WP53960 YDR327WYDR327W 327 nt7.5□□□□□ -1.21
YNL040WP53960 YKL147CYKL147C 618 nt7.5□□□□□ -1.21
YNL040WP53960 MCM5YLR274W 2328 nt7.5□□□□□ -1.21
YNL040WP53960 PPS1YBR276C 2424 nt7.49□□□□□ -1.21
YNL040WP53960 YJL213WYJL213W 996 nt7.49□□□□□ -1.21
YNL040WP53960 LOT6YLR011W 576 nt7.49□□□□□ -1.21
YNL040WP53960 LIP5YOR196C 1245 nt7.49□□□□□ -1.21
YNL040WP53960 YGR068W-AYGR068W-A 96 nt7.48□□□□□ -1.21
YNL040WP53960 NUP57YGR119C 1626 nt7.48□□□□□ -1.21
YNL040WP53960 YML079WYML079W 606 nt7.47□□□□□ -1.21
YNL040WP53960 SNF4YGL115W 969 nt7.46□□□□□ -1.22
YNL040WP53960 YML122CYML122C 381 nt7.46□□□□□ -1.22
YNL040WP53960 YOR012WYOR012W 414 nt7.46□□□□□ -1.22
YNL040WP53960 UME1YPL139C 1383 nt7.46□□□□□ -1.22
YNL040WP53960 SRF1YDL133W 1314 nt7.45□□□□□ -1.22
YNL040WP53960 YDR510C-AYDR510C-A 117 nt7.44□□□□□ -1.22
YNL040WP53960 PAM17YKR065C 594 nt7.44□□□□□ -1.22
YNL040WP53960 SDH8YBR269C 417 nt7.44□□□□□ -1.22
YNL040WP53960 NUP84YDL116W 2181 nt7.44□□□□□ -1.22
YNL040WP53960 RDR1YOR380W 1641 nt7.44□□□□□ -1.22
YNL040WP53960 YLR173WYLR173W 1827 nt7.43□□□□□ -1.22
YNL040WP53960 GCD11YER025W 1584 nt7.43□□□□□ -1.22
YNL040WP53960 PUP2YGR253C 783 nt7.43□□□□□ -1.22
YNL040WP53960 PTH2YBL057C 627 nt7.43□□□□□ -1.22
YNL040WP53960 YPL067CYPL067C 597 nt7.43□□□□□ -1.22
YNL040WP53960 ADE5,7YGL234W 2409 nt7.43□□□□□ -1.22
YNL040WP53960 RPR1RPR1 369 nt7.42□□□□□ -1.22
YNL040WP53960 YPQ1YOL092W 927 nt7.42□□□□□ -1.22
YNL040WP53960 CIT2YCR005C 1383 nt7.42□□□□□ -1.22
YNL040WP53960 FCP1YMR277W 2199 nt7.42□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms