Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
CASQ2O14958 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CASQ2O14958 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CASQ2O14958 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.87■■□□□ 1.41
CASQ2O14958 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CASQ2O14958 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.86■■□□□ 1.41
CASQ2O14958 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CASQ2O14958 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CASQ2O14958 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.86■■□□□ 1.41
CASQ2O14958 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CASQ2O14958 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.85■■□□□ 1.41
CASQ2O14958 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CASQ2O14958 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.84■■□□□ 1.41
CASQ2O14958 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CASQ2O14958 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CASQ2O14958 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CASQ2O14958 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.83■■□□□ 1.4
CASQ2O14958 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
CASQ2O14958 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CASQ2O14958 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASQ2O14958 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.82■■□□□ 1.4
CASQ2O14958 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASQ2O14958 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASQ2O14958 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.81■■□□□ 1.4
CASQ2O14958 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASQ2O14958 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASQ2O14958 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.81■■□□□ 1.4
CASQ2O14958 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.81■■□□□ 1.4
CASQ2O14958 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASQ2O14958 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CASQ2O14958 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CASQ2O14958 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASQ2O14958 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASQ2O14958 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASQ2O14958 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASQ2O14958 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
CASQ2O14958 DUSP8P4-201ENST00000399538 1761 ntBASIC23.78■■□□□ 1.4
CASQ2O14958 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASQ2O14958 WASH5P-204ENST00000632292 975 ntBASIC23.78■■□□□ 1.4
CASQ2O14958 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.78■■□□□ 1.4
CASQ2O14958 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASQ2O14958 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASQ2O14958 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.77■■□□□ 1.4
CASQ2O14958 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CASQ2O14958 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CASQ2O14958 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CASQ2O14958 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CASQ2O14958 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.76■■□□□ 1.39
CASQ2O14958 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
CASQ2O14958 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CASQ2O14958 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CASQ2O14958 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CASQ2O14958 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CASQ2O14958 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.74■■□□□ 1.39
CASQ2O14958 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.74■■□□□ 1.39
CASQ2O14958 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CASQ2O14958 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CASQ2O14958 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CASQ2O14958 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CASQ2O14958 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CASQ2O14958 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CASQ2O14958 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASQ2O14958 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC23.72■■□□□ 1.39
CASQ2O14958 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASQ2O14958 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASQ2O14958 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CASQ2O14958 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CASQ2O14958 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CASQ2O14958 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CASQ2O14958 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CASQ2O14958 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CASQ2O14958 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASQ2O14958 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CASQ2O14958 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
CASQ2O14958 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASQ2O14958 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASQ2O14958 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CASQ2O14958 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.68■■□□□ 1.38
CASQ2O14958 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CASQ2O14958 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.67■■□□□ 1.38
CASQ2O14958 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASQ2O14958 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASQ2O14958 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.66■■□□□ 1.38
CASQ2O14958 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CASQ2O14958 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CASQ2O14958 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CASQ2O14958 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CASQ2O14958 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CASQ2O14958 AP002414.2-202ENST00000590929 1450 ntBASIC23.65■■□□□ 1.38
CASQ2O14958 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CASQ2O14958 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CASQ2O14958 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CASQ2O14958 AC100797.4-201ENST00000631653 1827 ntBASIC23.64■■□□□ 1.38
CASQ2O14958 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CASQ2O14958 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
CASQ2O14958 AC092803.2-201ENST00000564287 1899 ntBASIC23.64■■□□□ 1.37
CASQ2O14958 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CASQ2O14958 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CASQ2O14958 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CASQ2O14958 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms