RNA–Protein interactions for RNA: ENST00000642089.1

SAMMSON-226, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-226ENST00000642089 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
SAMMSON-226ENST00000642089 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
SAMMSON-226ENST00000642089 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
SAMMSON-226ENST00000642089 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
SAMMSON-226ENST00000642089 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
SAMMSON-226ENST00000642089 FOXD1Q16676 465 aa14.74□□□□□ -0.05
SAMMSON-226ENST00000642089 MSH5O43196 834 aa14.49□□□□□ -0.09
SAMMSON-226ENST00000642089 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-226ENST00000642089 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
SAMMSON-226ENST00000642089 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
SAMMSON-226ENST00000642089 ADRA2BP18089 450 aa12.68□□□□□ -0.38
SAMMSON-226ENST00000642089 POTEHQ6S545 545 aa12.4□□□□□ -0.42
SAMMSON-226ENST00000642089 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
SAMMSON-226ENST00000642089 DMRT2Q9Y5R5 561 aa12.3□□□□□ -0.44
SAMMSON-226ENST00000642089 RNF39Q9H2S5 420 aa12.12□□□□□ -0.47
SAMMSON-226ENST00000642089 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
SAMMSON-226ENST00000642089 MAPK8IP2Q13387 824 aaPredicted RBP11.97□□□□□ -0.49
SAMMSON-226ENST00000642089 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
SAMMSON-226ENST00000642089 DCAF8L1A6NGE4 600 aa11.9□□□□□ -0.5
SAMMSON-226ENST00000642089 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
SAMMSON-226ENST00000642089 HOXD11P31277 338 aaPredicted RBP11.35□□□□□ -0.59
SAMMSON-226ENST00000642089 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
SAMMSON-226ENST00000642089 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
SAMMSON-226ENST00000642089 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
SAMMSON-226ENST00000642089 DSG3P32926 999 aa10.9□□□□□ -0.66
SAMMSON-226ENST00000642089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.9□□□□□ -0.67
SAMMSON-226ENST00000642089 CNKSR2Q8WXI2 1034 aa10.77□□□□□ -0.68
SAMMSON-226ENST00000642089 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
SAMMSON-226ENST00000642089 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
SAMMSON-226ENST00000642089 CAPN15O75808 1086 aa10.76□□□□□ -0.69
SAMMSON-226ENST00000642089 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.71
SAMMSON-226ENST00000642089 PPP4R3CPQ6ZMV5 832 aa10.61□□□□□ -0.71
SAMMSON-226ENST00000642089 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
SAMMSON-226ENST00000642089 CCDC180Q9P1Z9 1646 aa10.54□□□□□ -0.72
SAMMSON-226ENST00000642089 ABCC9O60706 1549 aa10.46□□□□□ -0.73
SAMMSON-226ENST00000642089 HAX1O00165 279 aa10.43□□□□□ -0.74
SAMMSON-226ENST00000642089 U3KPZ7 1027 aaPredicted RBP10.38□□□□□ -0.75
SAMMSON-226ENST00000642089 LHX8Q68G74 356 aa10.36□□□□□ -0.75
SAMMSON-226ENST00000642089 APLP2Q06481 763 aa10.31□□□□□ -0.76
SAMMSON-226ENST00000642089 ZNF219Q9P2Y4 722 aaPredicted RBP10.3□□□□□ -0.76
SAMMSON-226ENST00000642089 ABCB7O75027 752 aa10.29□□□□□ -0.76
SAMMSON-226ENST00000642089 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
SAMMSON-226ENST00000642089 PIP4P2Q8N4L2 257 aa10.19□□□□□ -0.78
SAMMSON-226ENST00000642089 DCAF8L2P0C7V8 631 aa10.08□□□□□ -0.8
SAMMSON-226ENST00000642089 AKT1S1Q96B36 256 aa10.06□□□□□ -0.8
SAMMSON-226ENST00000642089 NCBP3Q53F19 620 aaKnown RBP10.01□□□□□ -0.81
SAMMSON-226ENST00000642089 RB1CC1Q8TDY2 1594 aa9.97□□□□□ -0.81
SAMMSON-226ENST00000642089 EVX2Q03828 476 aa9.97□□□□□ -0.81
SAMMSON-226ENST00000642089 FXR2P51116 673 aaKnown RBP eCLIP9.96□□□□□ -0.82
SAMMSON-226ENST00000642089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.93□□□□□ -0.82
SAMMSON-226ENST00000642089 HNRNPUL2Q1KMD3 747 aaKnown RBP9.93□□□□□ -0.82
SAMMSON-226ENST00000642089 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
SAMMSON-226ENST00000642089 NACADO15069 1562 aa9.92□□□□□ -0.82
SAMMSON-226ENST00000642089 REM2Q8IYK8 340 aaPredicted RBP9.88□□□□□ -0.83
SAMMSON-226ENST00000642089 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
SAMMSON-226ENST00000642089 GABBR2O75899 941 aa9.84□□□□□ -0.83
SAMMSON-226ENST00000642089 POTEMA6NI47 508 aa9.81□□□□□ -0.84
SAMMSON-226ENST00000642089 PABPN1Q86U42 306 aaKnown RBP eCLIP9.8□□□□□ -0.84
SAMMSON-226ENST00000642089 MYO15BQ96JP2 1530 aa9.79□□□□□ -0.84
SAMMSON-226ENST00000642089 UNC13AQ9UPW8 1703 aa9.78□□□□□ -0.84
SAMMSON-226ENST00000642089 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
SAMMSON-226ENST00000642089 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
SAMMSON-226ENST00000642089 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
SAMMSON-226ENST00000642089 POTEGQ6S5H5 508 aa9.73□□□□□ -0.85
SAMMSON-226ENST00000642089 SCRIBQ14160 1630 aa9.71□□□□□ -0.85
SAMMSON-226ENST00000642089 C19orf67A6NJJ6 358 aa9.69□□□□□ -0.86
SAMMSON-226ENST00000642089 POLA2Q14181 598 aa9.68□□□□□ -0.86
SAMMSON-226ENST00000642089 BICRAQ9NZM4 1560 aa9.68□□□□□ -0.86
SAMMSON-226ENST00000642089 NPM3O75607 178 aaKnown RBP9.63□□□□□ -0.87
SAMMSON-226ENST00000642089 ZBTB12Q9Y330 459 aaPredicted RBP9.59□□□□□ -0.87
SAMMSON-226ENST00000642089 PRKAR2AP13861 404 aaKnown RBP9.54□□□□□ -0.88
SAMMSON-226ENST00000642089 CLCN6P51797 869 aa9.52□□□□□ -0.89
SAMMSON-226ENST00000642089 POTEIP0CG38 1075 aa9.5□□□□□ -0.89
SAMMSON-226ENST00000642089 SHROOM4Q9ULL8 1493 aa9.48□□□□□ -0.89
SAMMSON-226ENST00000642089 SLC4A2P04920 1241 aa9.46□□□□□ -0.9
SAMMSON-226ENST00000642089 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
SAMMSON-226ENST00000642089 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
SAMMSON-226ENST00000642089 EIF4G1Q04637 1599 aaKnown RBP9.43□□□□□ -0.9
SAMMSON-226ENST00000642089 CC2D2AQ9P2K1 1620 aa9.43□□□□□ -0.9
SAMMSON-226ENST00000642089 CECR2Q9BXF3 1484 aa9.37□□□□□ -0.91
SAMMSON-226ENST00000642089 OSCARQ8IYS5 282 aa9.37□□□□□ -0.91
SAMMSON-226ENST00000642089 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
SAMMSON-226ENST00000642089 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
SAMMSON-226ENST00000642089 SMARCA4P51532 1647 aa9.23□□□□□ -0.93
SAMMSON-226ENST00000642089 BAZ1AQ9NRL2 1556 aaPredicted RBP9.2□□□□□ -0.94
SAMMSON-226ENST00000642089 MROH2BQ7Z745 1585 aa9.18□□□□□ -0.94
SAMMSON-226ENST00000642089 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
SAMMSON-226ENST00000642089 CD44P16070 742 aaKnown RBP9.18□□□□□ -0.94
SAMMSON-226ENST00000642089 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
SAMMSON-226ENST00000642089 SMARCA2P51531 1590 aa9.15□□□□□ -0.94
SAMMSON-226ENST00000642089 NCAPD3P42695 1498 aa9.15□□□□□ -0.94
SAMMSON-226ENST00000642089 MAMSTRQ6ZN01 415 aa9.15□□□□□ -0.95
SAMMSON-226ENST00000642089 POTEB2H3BUK9 544 aa9.14□□□□□ -0.95
SAMMSON-226ENST00000642089 BAZ1BQ9UIG0 1483 aaKnown RBP9.12□□□□□ -0.95
SAMMSON-226ENST00000642089 CDAN1Q8IWY9 1227 aa9.12□□□□□ -0.95
SAMMSON-226ENST00000642089 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
SAMMSON-226ENST00000642089 WIZO95785 1651 aa9.1□□□□□ -0.95
SAMMSON-226ENST00000642089 SPDYE2BA6NHP3 402 aa9.09□□□□□ -0.95
SAMMSON-226ENST00000642089 SPDYE6P0CI01 402 aa9.09□□□□□ -0.95
SAMMSON-226ENST00000642089 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms