RNA–Protein interactions for RNA: ENST00000642002.1

MTHFR-219, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 549 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-219ENST00000642002 NISCHQ9Y2I1 1504 aa42.86■■■■■ 4.45
MTHFR-219ENST00000642002 CCDC180Q9P1Z9 1646 aa38.11■■■■□ 3.69
MTHFR-219ENST00000642002 ABCC9O60706 1549 aa37.37■■■■□ 3.57
MTHFR-219ENST00000642002 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
MTHFR-219ENST00000642002 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
MTHFR-219ENST00000642002 NACADO15069 1562 aa35.86■■■■□ 3.33
MTHFR-219ENST00000642002 ZCCHC6Q5VYS8 1495 aaKnown RBP35.69■■■■□ 3.3
MTHFR-219ENST00000642002 MYO15BQ96JP2 1530 aa35.6■■■■□ 3.29
MTHFR-219ENST00000642002 DCAF1Q9Y4B6 1507 aa35.44■■■■□ 3.26
MTHFR-219ENST00000642002 DNAJC5BQ9UF47 199 aa35.43■■■■□ 3.26
MTHFR-219ENST00000642002 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.19
MTHFR-219ENST00000642002 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.18
MTHFR-219ENST00000642002 SCRIBQ14160 1630 aa34.81■■■■□ 3.16
MTHFR-219ENST00000642002 BICRAQ9NZM4 1560 aa34.77■■■■□ 3.16
MTHFR-219ENST00000642002 SHROOM4Q9ULL8 1493 aa34.46■■■■□ 3.11
MTHFR-219ENST00000642002 EIF4G1Q04637 1599 aaKnown RBP33.9■■■■□ 3.02
MTHFR-219ENST00000642002 CC2D2AQ9P2K1 1620 aa33.77■■■■□ 3
MTHFR-219ENST00000642002 CECR2Q9BXF3 1484 aa33.58■■■□□ 2.97
MTHFR-219ENST00000642002 SMARCA4P51532 1647 aa33.26■■■□□ 2.91
MTHFR-219ENST00000642002 BAZ1AQ9NRL2 1556 aaPredicted RBP33.25■■■□□ 2.91
MTHFR-219ENST00000642002 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
MTHFR-219ENST00000642002 ATAD2BQ9ULI0 1458 aa33.09■■■□□ 2.89
MTHFR-219ENST00000642002 SMARCA2P51531 1590 aa33.09■■■□□ 2.89
MTHFR-219ENST00000642002 NCAPD3P42695 1498 aa33.07■■■□□ 2.88
MTHFR-219ENST00000642002 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
MTHFR-219ENST00000642002 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
MTHFR-219ENST00000642002 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
MTHFR-219ENST00000642002 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
MTHFR-219ENST00000642002 WIZO95785 1651 aa32.66■■■□□ 2.82
MTHFR-219ENST00000642002 RSF1Q96T23 1441 aaPredicted RBP32.64■■■□□ 2.82
MTHFR-219ENST00000642002 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
MTHFR-219ENST00000642002 NESP48681 1621 aa32.29■■■□□ 2.76
MTHFR-219ENST00000642002 ERCC6Q03468 1493 aa32.27■■■□□ 2.76
MTHFR-219ENST00000642002 LAMC3Q9Y6N6 1575 aa32.22■■■□□ 2.75
MTHFR-219ENST00000642002 CUX2O14529 1486 aa32.17■■■□□ 2.74
MTHFR-219ENST00000642002 CADPSQ9ULU8 1353 aa32.13■■■□□ 2.73
MTHFR-219ENST00000642002 PDS5BQ9NTI5 1447 aa32.05■■■□□ 2.72
MTHFR-219ENST00000642002 CCDC88BA6NC98 1476 aa31.95■■■□□ 2.7
MTHFR-219ENST00000642002 CFTRP13569 1480 aa31.92■■■□□ 2.7
MTHFR-219ENST00000642002 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.7
MTHFR-219ENST00000642002 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
MTHFR-219ENST00000642002 THOC2Q8NI27 1593 aaKnown RBP31.8■■■□□ 2.68
MTHFR-219ENST00000642002 FANCD2Q9BXW9 1451 aa31.78■■■□□ 2.68
MTHFR-219ENST00000642002 CEP164Q9UPV0 1460 aa31.76■■■□□ 2.67
MTHFR-219ENST00000642002 MRC2Q9UBG0 1479 aa31.71■■■□□ 2.67
MTHFR-219ENST00000642002 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
MTHFR-219ENST00000642002 WDR62O43379 1518 aa31.58■■■□□ 2.65
MTHFR-219ENST00000642002 URB2Q14146 1524 aaKnown RBP31.43■■■□□ 2.62
MTHFR-219ENST00000642002 ABCC8Q09428 1581 aa31.26■■■□□ 2.6
MTHFR-219ENST00000642002 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
MTHFR-219ENST00000642002 TOPBP1Q92547 1522 aa31.24■■■□□ 2.59
MTHFR-219ENST00000642002 DNMBPQ6XZF7 1577 aa31.22■■■□□ 2.59
MTHFR-219ENST00000642002 IFT140Q96RY7 1462 aa31.08■■■□□ 2.57
MTHFR-219ENST00000642002 CUX1P39880 1505 aa30.98■■■□□ 2.55
MTHFR-219ENST00000642002 POLA1P09884 1462 aaPredicted RBP30.98■■■□□ 2.55
MTHFR-219ENST00000642002 ZNF608Q9ULD9 1512 aaPredicted RBP30.92■■■□□ 2.54
MTHFR-219ENST00000642002 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
MTHFR-219ENST00000642002 SOGA1O94964 1423 aa30.88■■■□□ 2.53
MTHFR-219ENST00000642002 TARBP1Q13395 1621 aaKnown RBP30.87■■■□□ 2.53
MTHFR-219ENST00000642002 RAD54L2Q9Y4B4 1467 aa30.85■■■□□ 2.53
MTHFR-219ENST00000642002 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
MTHFR-219ENST00000642002 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
MTHFR-219ENST00000642002 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.515e-7■■□□□ 13.8
MTHFR-219ENST00000642002 TOP2BQ02880 1626 aa30.72■■■□□ 2.51
MTHFR-219ENST00000642002 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
MTHFR-219ENST00000642002 TDRD9Q8NDG6 1382 aaKnown RBP30.7■■■□□ 2.51
MTHFR-219ENST00000642002 BIVM-ERCC5R4GMW8 1640 aa30.7■■■□□ 2.51
MTHFR-219ENST00000642002 WDR97A6NE52 1622 aa30.66■■■□□ 2.5
MTHFR-219ENST00000642002 ABCA10Q8WWZ4 1543 aa30.6■■■□□ 2.49
MTHFR-219ENST00000642002 OSCARQ8IYS5 282 aa30.58■■■□□ 2.49
MTHFR-219ENST00000642002 GRIN2BQ13224 1484 aa30.52■■■□□ 2.48
MTHFR-219ENST00000642002 GAPVD1Q14C86 1478 aa30.51■■■□□ 2.48
MTHFR-219ENST00000642002 SNAPC4Q5SXM2 1469 aa30.49■■■□□ 2.47
MTHFR-219ENST00000642002 FBLN2P98095 1184 aa30.47■■■□□ 2.47
MTHFR-219ENST00000642002 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
MTHFR-219ENST00000642002 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
MTHFR-219ENST00000642002 PBRM1Q86U86 1689 aa30.42■■■□□ 2.46
MTHFR-219ENST00000642002 CHD1O14646 1710 aa30.39■■■□□ 2.46
MTHFR-219ENST00000642002 CHMP7Q8WUX9 453 aaPredicted RBP30.36■■■□□ 2.45
MTHFR-219ENST00000642002 SYNJ2O15056 1496 aa30.32■■■□□ 2.44
MTHFR-219ENST00000642002 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
MTHFR-219ENST00000642002 RIMBP3CA6NJZ7 1639 aa30.2■■■□□ 2.43
MTHFR-219ENST00000642002 RIMBP3BA6NNM3 1639 aa30.2■■■□□ 2.43
MTHFR-219ENST00000642002 RIMBP3Q9UFD9 1639 aa30.2■■■□□ 2.43
MTHFR-219ENST00000642002 ADAMTS12P58397 1594 aa30.2■■■□□ 2.42
MTHFR-219ENST00000642002 KIF27Q86VH2 1401 aa30.19■■■□□ 2.42
MTHFR-219ENST00000642002 FHAD1B1AJZ9 1412 aa30.17■■■□□ 2.42
MTHFR-219ENST00000642002 GRIN2AQ12879 1464 aa30.12■■■□□ 2.41
MTHFR-219ENST00000642002 CLASP1Q7Z460 1538 aa30.07■■■□□ 2.4
MTHFR-219ENST00000642002 ARHGEF11O15085 1522 aa30.06■■■□□ 2.4
MTHFR-219ENST00000642002 IGF1RP08069 1367 aa30.02■■■□□ 2.4
MTHFR-219ENST00000642002 CUL7Q14999 1698 aa29.97■■■□□ 2.39
MTHFR-219ENST00000642002 NUP160Q12769 1436 aa29.96■■■□□ 2.39
MTHFR-219ENST00000642002 CEP170Q5SW79 1584 aa29.95■■■□□ 2.39
MTHFR-219ENST00000642002 CARMIL1Q5VZK9 1371 aa29.88■■■□□ 2.37
MTHFR-219ENST00000642002 CYB5RLQ6IPT4 315 aa29.87■■■□□ 2.37
MTHFR-219ENST00000642002 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
MTHFR-219ENST00000642002 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
MTHFR-219ENST00000642002 TRHP20396 242 aaPredicted RBP29.78■■■□□ 2.36
MTHFR-219ENST00000642002 SHROOM2Q13796 1616 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms