RNA–Protein interactions for RNA: ENST00000641967.1

AP000553.4-201, humanhuman

BASIC

Gene AP000553.4, Length 471 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000553.4-201ENST00000641967 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
AP000553.4-201ENST00000641967 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
AP000553.4-201ENST00000641967 ABCC9O60706 1549 aa24.78■■□□□ 1.56
AP000553.4-201ENST00000641967 ZCCHC6Q5VYS8 1495 aaKnown RBP23.94■■□□□ 1.42
AP000553.4-201ENST00000641967 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
AP000553.4-201ENST00000641967 DCAF1Q9Y4B6 1507 aa23.63■■□□□ 1.37
AP000553.4-201ENST00000641967 NACADO15069 1562 aa23.56■■□□□ 1.36
AP000553.4-201ENST00000641967 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
AP000553.4-201ENST00000641967 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
AP000553.4-201ENST00000641967 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
AP000553.4-201ENST00000641967 DNAJC5BQ9UF47 199 aa23.13■■□□□ 1.29
AP000553.4-201ENST00000641967 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
AP000553.4-201ENST00000641967 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
AP000553.4-201ENST00000641967 SHROOM4Q9ULL8 1493 aa23.01■■□□□ 1.27
AP000553.4-201ENST00000641967 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
AP000553.4-201ENST00000641967 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
AP000553.4-201ENST00000641967 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
AP000553.4-201ENST00000641967 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
AP000553.4-201ENST00000641967 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
AP000553.4-201ENST00000641967 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
AP000553.4-201ENST00000641967 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
AP000553.4-201ENST00000641967 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
AP000553.4-201ENST00000641967 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
AP000553.4-201ENST00000641967 WIZO95785 1651 aa21.79■■□□□ 1.08
AP000553.4-201ENST00000641967 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
AP000553.4-201ENST00000641967 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
AP000553.4-201ENST00000641967 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
AP000553.4-201ENST00000641967 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
AP000553.4-201ENST00000641967 TOP2AP11388 1531 aaKnown RBP21.61■■□□□ 1.05
AP000553.4-201ENST00000641967 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
AP000553.4-201ENST00000641967 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.03
AP000553.4-201ENST00000641967 ERCC6Q03468 1493 aa21.39■■□□□ 1.01
AP000553.4-201ENST00000641967 CUX2O14529 1486 aa21.37■■□□□ 1.01
AP000553.4-201ENST00000641967 CCDC88BA6NC98 1476 aa21.33■■□□□ 1.01
AP000553.4-201ENST00000641967 NESP48681 1621 aa21.33■■□□□ 1
AP000553.4-201ENST00000641967 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
AP000553.4-201ENST00000641967 LAMC3Q9Y6N6 1575 aa21.24■□□□□ 0.99
AP000553.4-201ENST00000641967 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
AP000553.4-201ENST00000641967 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
AP000553.4-201ENST00000641967 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
AP000553.4-201ENST00000641967 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
AP000553.4-201ENST00000641967 CADPSQ9ULU8 1353 aa21.04■□□□□ 0.96
AP000553.4-201ENST00000641967 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
AP000553.4-201ENST00000641967 CFTRP13569 1480 aa20.89■□□□□ 0.94
AP000553.4-201ENST00000641967 WDR62O43379 1518 aa20.88■□□□□ 0.93
AP000553.4-201ENST00000641967 PRDM2Q13029 1718 aa20.85■□□□□ 0.93
AP000553.4-201ENST00000641967 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
AP000553.4-201ENST00000641967 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
AP000553.4-201ENST00000641967 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
AP000553.4-201ENST00000641967 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
AP000553.4-201ENST00000641967 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.915e-8■■□□□ 14.3
AP000553.4-201ENST00000641967 SYNJ1O43426 1573 aa20.69■□□□□ 0.9
AP000553.4-201ENST00000641967 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
AP000553.4-201ENST00000641967 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.9
AP000553.4-201ENST00000641967 TOP2BQ02880 1626 aa20.64■□□□□ 0.89
AP000553.4-201ENST00000641967 CUX1P39880 1505 aa20.58■□□□□ 0.88
AP000553.4-201ENST00000641967 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
AP000553.4-201ENST00000641967 EEA1Q15075 1411 aa20.44■□□□□ 0.86
AP000553.4-201ENST00000641967 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
AP000553.4-201ENST00000641967 SOGA1O94964 1423 aa20.43■□□□□ 0.86
AP000553.4-201ENST00000641967 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
AP000553.4-201ENST00000641967 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
AP000553.4-201ENST00000641967 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
AP000553.4-201ENST00000641967 FAM9AQ8IZU1 332 aaPredicted RBP20.35■□□□□ 0.85
AP000553.4-201ENST00000641967 FGD5Q6ZNL6 1462 aa20.33■□□□□ 0.85
AP000553.4-201ENST00000641967 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
AP000553.4-201ENST00000641967 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
AP000553.4-201ENST00000641967 LOC105371045A0A1W2PR82 267 aa20.3■□□□□ 0.84
AP000553.4-201ENST00000641967 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
AP000553.4-201ENST00000641967 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
AP000553.4-201ENST00000641967 CSRNP3Q8WYN3 585 aa20.23■□□□□ 0.83
AP000553.4-201ENST00000641967 KIF21BO75037 1637 aa20.21■□□□□ 0.83
AP000553.4-201ENST00000641967 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
AP000553.4-201ENST00000641967 WDR97A6NE52 1622 aa20.19■□□□□ 0.82
AP000553.4-201ENST00000641967 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
AP000553.4-201ENST00000641967 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
AP000553.4-201ENST00000641967 CHD1O14646 1710 aa20.15■□□□□ 0.82
AP000553.4-201ENST00000641967 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
AP000553.4-201ENST00000641967 RIMBP3CA6NJZ7 1639 aa20.13■□□□□ 0.81
AP000553.4-201ENST00000641967 RIMBP3BA6NNM3 1639 aa20.13■□□□□ 0.81
AP000553.4-201ENST00000641967 RIMBP3Q9UFD9 1639 aa20.13■□□□□ 0.81
AP000553.4-201ENST00000641967 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
AP000553.4-201ENST00000641967 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
AP000553.4-201ENST00000641967 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
AP000553.4-201ENST00000641967 ARHGEF11O15085 1522 aa20.07■□□□□ 0.8
AP000553.4-201ENST00000641967 ABCA5Q8WWZ7 1642 aa20.06■□□□□ 0.8
AP000553.4-201ENST00000641967 TNIKQ9UKE5 1360 aa20.05■□□□□ 0.8
AP000553.4-201ENST00000641967 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
AP000553.4-201ENST00000641967 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
AP000553.4-201ENST00000641967 IGF1RP08069 1367 aa20.03■□□□□ 0.8
AP000553.4-201ENST00000641967 EHMT2Q96KQ7 1210 aa20■□□□□ 0.79
AP000553.4-201ENST00000641967 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
AP000553.4-201ENST00000641967 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
AP000553.4-201ENST00000641967 CUL7Q14999 1698 aa19.96■□□□□ 0.79
AP000553.4-201ENST00000641967 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
AP000553.4-201ENST00000641967 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
AP000553.4-201ENST00000641967 GAPVD1Q14C86 1478 aa19.94■□□□□ 0.78
AP000553.4-201ENST00000641967 FBLN2P98095 1184 aa19.94■□□□□ 0.78
AP000553.4-201ENST00000641967 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
AP000553.4-201ENST00000641967 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms