RNA–Protein interactions for RNA: ENST00000641392.1

CASC19-226, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-226ENST00000641392 NISCHQ9Y2I1 1504 aa20.48■□□□□ 0.87
CASC19-226ENST00000641392 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
CASC19-226ENST00000641392 ABCC9O60706 1549 aa18.62■□□□□ 0.57
CASC19-226ENST00000641392 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
CASC19-226ENST00000641392 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
CASC19-226ENST00000641392 NACADO15069 1562 aa17.55■□□□□ 0.4
CASC19-226ENST00000641392 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
CASC19-226ENST00000641392 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
CASC19-226ENST00000641392 UNC13AQ9UPW8 1703 aa17.37■□□□□ 0.37
CASC19-226ENST00000641392 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.35
CASC19-226ENST00000641392 DCAF8L2P0C7V8 631 aa17.21■□□□□ 0.35
CASC19-226ENST00000641392 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
CASC19-226ENST00000641392 BICRAQ9NZM4 1560 aa17.18■□□□□ 0.34
CASC19-226ENST00000641392 SHROOM4Q9ULL8 1493 aa17.03■□□□□ 0.32
CASC19-226ENST00000641392 DCAF1Q9Y4B6 1507 aa16.96■□□□□ 0.31
CASC19-226ENST00000641392 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
CASC19-226ENST00000641392 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
CASC19-226ENST00000641392 SCRIBQ14160 1630 aa16.83■□□□□ 0.28
CASC19-226ENST00000641392 CECR2Q9BXF3 1484 aa16.81■□□□□ 0.28
CASC19-226ENST00000641392 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
CASC19-226ENST00000641392 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
CASC19-226ENST00000641392 CUX2O14529 1486 aa16.21■□□□□ 0.19
CASC19-226ENST00000641392 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
CASC19-226ENST00000641392 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
CASC19-226ENST00000641392 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
CASC19-226ENST00000641392 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
CASC19-226ENST00000641392 SENP3Q9H4L4 574 aaPredicted RBP16.07■□□□□ 0.16
CASC19-226ENST00000641392 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
CASC19-226ENST00000641392 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
CASC19-226ENST00000641392 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
CASC19-226ENST00000641392 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
CASC19-226ENST00000641392 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
CASC19-226ENST00000641392 NESP48681 1621 aa15.92■□□□□ 0.14
CASC19-226ENST00000641392 THOC2Q8NI27 1593 aaKnown RBP15.91■□□□□ 0.14
CASC19-226ENST00000641392 LAMC3Q9Y6N6 1575 aa15.89■□□□□ 0.13
CASC19-226ENST00000641392 PHF23Q9BUL5 403 aaPredicted RBP15.84■□□□□ 0.13
CASC19-226ENST00000641392 KIF21AQ7Z4S6 1674 aa15.82■□□□□ 0.12
CASC19-226ENST00000641392 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
CASC19-226ENST00000641392 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
CASC19-226ENST00000641392 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
CASC19-226ENST00000641392 WDR62O43379 1518 aa15.63■□□□□ 0.09
CASC19-226ENST00000641392 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
CASC19-226ENST00000641392 WIZO95785 1651 aa15.58■□□□□ 0.08
CASC19-226ENST00000641392 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
CASC19-226ENST00000641392 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
CASC19-226ENST00000641392 FANCD2Q9BXW9 1451 aa15.48■□□□□ 0.07
CASC19-226ENST00000641392 CFTRP13569 1480 aa15.43■□□□□ 0.06
CASC19-226ENST00000641392 PRDM2Q13029 1718 aa15.43■□□□□ 0.06
CASC19-226ENST00000641392 TOP2AP11388 1531 aaKnown RBP15.4■□□□□ 0.06
CASC19-226ENST00000641392 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
CASC19-226ENST00000641392 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
CASC19-226ENST00000641392 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
CASC19-226ENST00000641392 RIMBP3CA6NJZ7 1639 aa15.25■□□□□ 0.03
CASC19-226ENST00000641392 RIMBP3BA6NNM3 1639 aa15.25■□□□□ 0.03
CASC19-226ENST00000641392 RIMBP3Q9UFD9 1639 aa15.25■□□□□ 0.03
CASC19-226ENST00000641392 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
CASC19-226ENST00000641392 EIF4G3O43432 1585 aaKnown RBP15.17■□□□□ 0.02
CASC19-226ENST00000641392 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
CASC19-226ENST00000641392 ZNF608Q9ULD9 1512 aaPredicted RBP15.17■□□□□ 0.02
CASC19-226ENST00000641392 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
CASC19-226ENST00000641392 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
CASC19-226ENST00000641392 CCDC88BA6NC98 1476 aa15.15■□□□□ 0.02
CASC19-226ENST00000641392 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
CASC19-226ENST00000641392 CHD1O14646 1710 aa15.12■□□□□ 0.01
CASC19-226ENST00000641392 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
CASC19-226ENST00000641392 FOXD1Q16676 465 aa15.07■□□□□ 0
CASC19-226ENST00000641392 WDR97A6NE52 1622 aa15□□□□□ -0.01
CASC19-226ENST00000641392 POLA1P09884 1462 aaPredicted RBP14.99□□□□□ -0.01
CASC19-226ENST00000641392 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.01
CASC19-226ENST00000641392 ARAP1Q96P48 1450 aa14.98□□□□□ -0.01
CASC19-226ENST00000641392 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
CASC19-226ENST00000641392 CLASP1Q7Z460 1538 aa14.91□□□□□ -0.02
CASC19-226ENST00000641392 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
CASC19-226ENST00000641392 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
CASC19-226ENST00000641392 FBLN2P98095 1184 aa14.89□□□□□ -0.03
CASC19-226ENST00000641392 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
CASC19-226ENST00000641392 SOGA1O94964 1423 aa14.88□□□□□ -0.03
CASC19-226ENST00000641392 MAGI1Q96QZ7 1491 aaPredicted RBP14.88□□□□□ -0.03
CASC19-226ENST00000641392 FGD5Q6ZNL6 1462 aa14.87□□□□□ -0.03
CASC19-226ENST00000641392 TRHP20396 242 aaPredicted RBP14.86□□□□□ -0.03
CASC19-226ENST00000641392 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
CASC19-226ENST00000641392 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
CASC19-226ENST00000641392 GRIN2BQ13224 1484 aa14.83□□□□□ -0.04
CASC19-226ENST00000641392 CUX1P39880 1505 aa14.82□□□□□ -0.04
CASC19-226ENST00000641392 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
CASC19-226ENST00000641392 CHMP7Q8WUX9 453 aaPredicted RBP14.78□□□□□ -0.04
CASC19-226ENST00000641392 ABCA5Q8WWZ7 1642 aa14.75□□□□□ -0.05
CASC19-226ENST00000641392 GAPVD1Q14C86 1478 aa14.73□□□□□ -0.05
CASC19-226ENST00000641392 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
CASC19-226ENST00000641392 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
CASC19-226ENST00000641392 GRIN2AQ12879 1464 aa14.64□□□□□ -0.07
CASC19-226ENST00000641392 BIVM-ERCC5R4GMW8 1640 aa14.61□□□□□ -0.07
CASC19-226ENST00000641392 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
CASC19-226ENST00000641392 CEP170Q5SW79 1584 aa14.6□□□□□ -0.07
CASC19-226ENST00000641392 ERCC6L2Q5T890 1561 aa14.59□□□□□ -0.07
CASC19-226ENST00000641392 NUP160Q12769 1436 aa14.59□□□□□ -0.07
CASC19-226ENST00000641392 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
CASC19-226ENST00000641392 TOP2BQ02880 1626 aa14.58□□□□□ -0.08
CASC19-226ENST00000641392 POTEDQ86YR6 584 aa14.57□□□□□ -0.08
CASC19-226ENST00000641392 FHAD1B1AJZ9 1412 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms