RNA–Protein interactions for RNA: ENST00000640901.1

ATXN10-212, Transcript of ataxin 10, humanhuman

TSL 5 BASIC

Gene ATXN10, Length 1,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN10-212ENST00000640901 NISCHQ9Y2I1 1504 aa29.83■■■□□ 2.37
ATXN10-212ENST00000640901 ABCC9O60706 1549 aa26.85■■□□□ 1.89
ATXN10-212ENST00000640901 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
ATXN10-212ENST00000640901 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
ATXN10-212ENST00000640901 NACADO15069 1562 aa25.33■■□□□ 1.65
ATXN10-212ENST00000640901 DCAF8L2P0C7V8 631 aa25.25■■□□□ 1.63
ATXN10-212ENST00000640901 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
ATXN10-212ENST00000640901 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
ATXN10-212ENST00000640901 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.59
ATXN10-212ENST00000640901 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
ATXN10-212ENST00000640901 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
ATXN10-212ENST00000640901 BICRAQ9NZM4 1560 aa24.77■■□□□ 1.56
ATXN10-212ENST00000640901 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
ATXN10-212ENST00000640901 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
ATXN10-212ENST00000640901 SCRIBQ14160 1630 aa24.46■■□□□ 1.51
ATXN10-212ENST00000640901 SHROOM4Q9ULL8 1493 aa24.4■■□□□ 1.5
ATXN10-212ENST00000640901 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
ATXN10-212ENST00000640901 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
ATXN10-212ENST00000640901 EIF4G1Q04637 1599 aaKnown RBP24.18■■□□□ 1.46
ATXN10-212ENST00000640901 CECR2Q9BXF3 1484 aa24.17■■□□□ 1.46
ATXN10-212ENST00000640901 NCAPD3P42695 1498 aa23.35■■□□□ 1.33
ATXN10-212ENST00000640901 SMARCA4P51532 1647 aa23.31■■□□□ 1.32
ATXN10-212ENST00000640901 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
ATXN10-212ENST00000640901 SMARCA2P51531 1590 aa23.26■■□□□ 1.31
ATXN10-212ENST00000640901 HMGXB3Q12766 1538 aa23.21■■□□□ 1.31
ATXN10-212ENST00000640901 ERCC6Q03468 1493 aa23.19■■□□□ 1.3
ATXN10-212ENST00000640901 BAZ1AQ9NRL2 1556 aaPredicted RBP23.17■■□□□ 1.3
ATXN10-212ENST00000640901 CUX2O14529 1486 aa23.12■■□□□ 1.29
ATXN10-212ENST00000640901 DNAJC5Q9H3Z4 198 aa23.12■■□□□ 1.29
ATXN10-212ENST00000640901 BAZ1BQ9UIG0 1483 aaKnown RBP23.11■■□□□ 1.29
ATXN10-212ENST00000640901 NESP48681 1621 aa23.05■■□□□ 1.28
ATXN10-212ENST00000640901 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
ATXN10-212ENST00000640901 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
ATXN10-212ENST00000640901 LAMC3Q9Y6N6 1575 aa22.88■■□□□ 1.25
ATXN10-212ENST00000640901 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.25
ATXN10-212ENST00000640901 KIF21AQ7Z4S6 1674 aa22.81■■□□□ 1.24
ATXN10-212ENST00000640901 WIZO95785 1651 aa22.76■■□□□ 1.23
ATXN10-212ENST00000640901 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
ATXN10-212ENST00000640901 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
ATXN10-212ENST00000640901 MRC2Q9UBG0 1479 aa22.55■■□□□ 1.2
ATXN10-212ENST00000640901 WDR62O43379 1518 aa22.49■■□□□ 1.19
ATXN10-212ENST00000640901 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
ATXN10-212ENST00000640901 CEP164Q9UPV0 1460 aa22.47■■□□□ 1.19
ATXN10-212ENST00000640901 TOP2AP11388 1531 aaKnown RBP22.44■■□□□ 1.18
ATXN10-212ENST00000640901 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
ATXN10-212ENST00000640901 CFTRP13569 1480 aa22.39■■□□□ 1.17
ATXN10-212ENST00000640901 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
ATXN10-212ENST00000640901 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
ATXN10-212ENST00000640901 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
ATXN10-212ENST00000640901 TRIM41Q8WV44 630 aa22.17■■□□□ 1.14
ATXN10-212ENST00000640901 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
ATXN10-212ENST00000640901 IFT140Q96RY7 1462 aa22■■□□□ 1.11
ATXN10-212ENST00000640901 TOPBP1Q92547 1522 aa22■■□□□ 1.11
ATXN10-212ENST00000640901 ZNF608Q9ULD9 1512 aaPredicted RBP21.97■■□□□ 1.11
ATXN10-212ENST00000640901 ABCC8Q09428 1581 aa21.94■■□□□ 1.1
ATXN10-212ENST00000640901 DNMBPQ6XZF7 1577 aa21.93■■□□□ 1.1
ATXN10-212ENST00000640901 EIF4G3O43432 1585 aaKnown RBP21.88■■□□□ 1.09
ATXN10-212ENST00000640901 RIMBP3CA6NJZ7 1639 aa21.83■■□□□ 1.08
ATXN10-212ENST00000640901 RIMBP3BA6NNM3 1639 aa21.83■■□□□ 1.08
ATXN10-212ENST00000640901 RIMBP3Q9UFD9 1639 aa21.83■■□□□ 1.08
ATXN10-212ENST00000640901 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
ATXN10-212ENST00000640901 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.088e-7■■■□□ 16.4
ATXN10-212ENST00000640901 CHD1O14646 1710 aa21.77■■□□□ 1.08
ATXN10-212ENST00000640901 POLA1P09884 1462 aaPredicted RBP21.77■■□□□ 1.07
ATXN10-212ENST00000640901 ARHGEF11O15085 1522 aa21.72■■□□□ 1.07
ATXN10-212ENST00000640901 RAD54L2Q9Y4B4 1467 aa21.7■■□□□ 1.06
ATXN10-212ENST00000640901 FBLN2P98095 1184 aa21.67■■□□□ 1.06
ATXN10-212ENST00000640901 SOGA1O94964 1423 aa21.66■■□□□ 1.06
ATXN10-212ENST00000640901 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.06
ATXN10-212ENST00000640901 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
ATXN10-212ENST00000640901 CUX1P39880 1505 aa21.61■■□□□ 1.05
ATXN10-212ENST00000640901 WDR97A6NE52 1622 aa21.58■■□□□ 1.04
ATXN10-212ENST00000640901 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
ATXN10-212ENST00000640901 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
ATXN10-212ENST00000640901 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
ATXN10-212ENST00000640901 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
ATXN10-212ENST00000640901 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
ATXN10-212ENST00000640901 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
ATXN10-212ENST00000640901 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
ATXN10-212ENST00000640901 CHMP7Q8WUX9 453 aaPredicted RBP21.48■■□□□ 1.03
ATXN10-212ENST00000640901 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
ATXN10-212ENST00000640901 SYNJ1O43426 1573 aa21.46■■□□□ 1.03
ATXN10-212ENST00000640901 CLASP1Q7Z460 1538 aa21.45■■□□□ 1.02
ATXN10-212ENST00000640901 SYNJ2O15056 1496 aa21.41■■□□□ 1.02
ATXN10-212ENST00000640901 GAPVD1Q14C86 1478 aa21.41■■□□□ 1.02
ATXN10-212ENST00000640901 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
ATXN10-212ENST00000640901 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
ATXN10-212ENST00000640901 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
ATXN10-212ENST00000640901 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
ATXN10-212ENST00000640901 BIVM-ERCC5R4GMW8 1640 aa21.28■■□□□ 1
ATXN10-212ENST00000640901 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
ATXN10-212ENST00000640901 ADAMTS12P58397 1594 aa21.22■□□□□ 0.99
ATXN10-212ENST00000640901 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
ATXN10-212ENST00000640901 CEP170Q5SW79 1584 aa21.15■□□□□ 0.98
ATXN10-212ENST00000640901 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
ATXN10-212ENST00000640901 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
ATXN10-212ENST00000640901 NUP160Q12769 1436 aa21.12■□□□□ 0.97
ATXN10-212ENST00000640901 ERICH3Q5RHP9 1530 aa21.11■□□□□ 0.97
ATXN10-212ENST00000640901 SHROOM2Q13796 1616 aa21.06■□□□□ 0.96
ATXN10-212ENST00000640901 SENP3Q9H4L4 574 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms