RNA–Protein interactions for RNA: ENST00000640832.1

LINC01138-210, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 5 BASIC

Gene LINC01138, Length 1,709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-210ENST00000640832 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.88
LINC01138-210ENST00000640832 CHIC1Q5VXU3 224 aa19.61■□□□□ 0.73
LINC01138-210ENST00000640832 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
LINC01138-210ENST00000640832 POTEDQ86YR6 584 aa17.58■□□□□ 0.41
LINC01138-210ENST00000640832 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
LINC01138-210ENST00000640832 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
LINC01138-210ENST00000640832 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
LINC01138-210ENST00000640832 ABCC9O60706 1549 aa17.32■□□□□ 0.36
LINC01138-210ENST00000640832 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
LINC01138-210ENST00000640832 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
LINC01138-210ENST00000640832 MYT1Q01538 1121 aa16.61■□□□□ 0.25
LINC01138-210ENST00000640832 FOXD1Q16676 465 aa16.42■□□□□ 0.22
LINC01138-210ENST00000640832 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
LINC01138-210ENST00000640832 PELP1Q8IZL8 1130 aaKnown RBP16.39■□□□□ 0.21
LINC01138-210ENST00000640832 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
LINC01138-210ENST00000640832 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
LINC01138-210ENST00000640832 DAXXQ9UER7 740 aaPredicted RBP15.84■□□□□ 0.13
LINC01138-210ENST00000640832 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
LINC01138-210ENST00000640832 APLP2Q06481 763 aa15.71■□□□□ 0.1
LINC01138-210ENST00000640832 PLPPR3Q6T4P5 718 aa15.69■□□□□ 0.1
LINC01138-210ENST00000640832 ERICH6Q7L0X2 663 aa15.66■□□□□ 0.1
LINC01138-210ENST00000640832 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
LINC01138-210ENST00000640832 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
LINC01138-210ENST00000640832 PRKCSHP14314 528 aaPredicted RBP15.56■□□□□ 0.08
LINC01138-210ENST00000640832 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
LINC01138-210ENST00000640832 MSH5O43196 834 aa15.53■□□□□ 0.08
LINC01138-210ENST00000640832 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
LINC01138-210ENST00000640832 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
LINC01138-210ENST00000640832 NACADO15069 1562 aa15.4■□□□□ 0.06
LINC01138-210ENST00000640832 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
LINC01138-210ENST00000640832 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.04
LINC01138-210ENST00000640832 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
LINC01138-210ENST00000640832 ADRA2BP18089 450 aa15.19■□□□□ 0.02
LINC01138-210ENST00000640832 CUX2O14529 1486 aa15.15■□□□□ 0.02
LINC01138-210ENST00000640832 EIF4G1Q04637 1599 aaKnown RBP15.14■□□□□ 0.01
LINC01138-210ENST00000640832 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
LINC01138-210ENST00000640832 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
LINC01138-210ENST00000640832 SHROOM4Q9ULL8 1493 aa14.88□□□□□ -0.03
LINC01138-210ENST00000640832 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.05
LINC01138-210ENST00000640832 ARXQ96QS3 562 aa14.77□□□□□ -0.05
LINC01138-210ENST00000640832 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
LINC01138-210ENST00000640832 EIF5BO60841 1220 aaKnown RBP14.63□□□□□ -0.07
LINC01138-210ENST00000640832 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
LINC01138-210ENST00000640832 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
LINC01138-210ENST00000640832 NESP48681 1621 aa14.61□□□□□ -0.07
LINC01138-210ENST00000640832 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
LINC01138-210ENST00000640832 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
LINC01138-210ENST00000640832 RANGAP1P46060 587 aaPredicted RBP14.49□□□□□ -0.09
LINC01138-210ENST00000640832 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
LINC01138-210ENST00000640832 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
LINC01138-210ENST00000640832 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
LINC01138-210ENST00000640832 BCL11AQ9H165 835 aa14.42□□□□□ -0.1
LINC01138-210ENST00000640832 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
LINC01138-210ENST00000640832 CYB5RLQ6IPT4 315 aa14.35□□□□□ -0.11
LINC01138-210ENST00000640832 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
LINC01138-210ENST00000640832 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.13
LINC01138-210ENST00000640832 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.13
LINC01138-210ENST00000640832 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.13
LINC01138-210ENST00000640832 BAZ1AQ9NRL2 1556 aaPredicted RBP14.25□□□□□ -0.13
LINC01138-210ENST00000640832 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
LINC01138-210ENST00000640832 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
LINC01138-210ENST00000640832 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
LINC01138-210ENST00000640832 HOMEZQ8IX15 550 aa14.2□□□□□ -0.14
LINC01138-210ENST00000640832 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
LINC01138-210ENST00000640832 ARHGEF11O15085 1522 aa14.15□□□□□ -0.14
LINC01138-210ENST00000640832 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
LINC01138-210ENST00000640832 KIF21AQ7Z4S6 1674 aa14.13□□□□□ -0.15
LINC01138-210ENST00000640832 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
LINC01138-210ENST00000640832 FAM9AQ8IZU1 332 aaPredicted RBP14.08□□□□□ -0.16
LINC01138-210ENST00000640832 MRC2Q9UBG0 1479 aa14.06□□□□□ -0.16
LINC01138-210ENST00000640832 LAMC3Q9Y6N6 1575 aa14.06□□□□□ -0.16
LINC01138-210ENST00000640832 KLHL34Q8N239 644 aa14.04□□□□□ -0.16
LINC01138-210ENST00000640832 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
LINC01138-210ENST00000640832 WDR62O43379 1518 aa14□□□□□ -0.17
LINC01138-210ENST00000640832 HMGXB3Q12766 1538 aa14□□□□□ -0.17
LINC01138-210ENST00000640832 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
LINC01138-210ENST00000640832 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
LINC01138-210ENST00000640832 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
LINC01138-210ENST00000640832 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
LINC01138-210ENST00000640832 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
LINC01138-210ENST00000640832 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
LINC01138-210ENST00000640832 TAOK2Q9UL54 1235 aa13.85□□□□□ -0.19
LINC01138-210ENST00000640832 KCNA4P22459 653 aa13.83□□□□□ -0.2
LINC01138-210ENST00000640832 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
LINC01138-210ENST00000640832 KDM4FA0A1W2PPD8 638 aa13.82□□□□□ -0.2
LINC01138-210ENST00000640832 UBE2Q2Q8WVN8 375 aa13.81□□□□□ -0.2
LINC01138-210ENST00000640832 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
LINC01138-210ENST00000640832 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
LINC01138-210ENST00000640832 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
LINC01138-210ENST00000640832 FBLN2P98095 1184 aa13.77□□□□□ -0.21
LINC01138-210ENST00000640832 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
LINC01138-210ENST00000640832 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
LINC01138-210ENST00000640832 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
LINC01138-210ENST00000640832 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
LINC01138-210ENST00000640832 BCANQ96GW7 911 aa13.67□□□□□ -0.22
LINC01138-210ENST00000640832 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
LINC01138-210ENST00000640832 NPM2Q86SE8 214 aaKnown RBP13.64□□□□□ -0.23
LINC01138-210ENST00000640832 CENPBP07199 599 aaPredicted RBP13.61□□□□□ -0.23
LINC01138-210ENST00000640832 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
LINC01138-210ENST00000640832 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms