RNA–Protein interactions for RNA: ENST00000640684.1

PAX6-276, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-276ENST00000640684 NISCHQ9Y2I1 1504 aa36.3■■■■□ 3.4
PAX6-276ENST00000640684 CCDC180Q9P1Z9 1646 aa31.73■■■□□ 2.67
PAX6-276ENST00000640684 ZCCHC6Q5VYS8 1495 aaKnown RBP30.42■■■□□ 2.46
PAX6-276ENST00000640684 ABCC9O60706 1549 aa30.18■■■□□ 2.42
PAX6-276ENST00000640684 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
PAX6-276ENST00000640684 DCAF1Q9Y4B6 1507 aa30.02■■■□□ 2.4
PAX6-276ENST00000640684 MYO15BQ96JP2 1530 aa29.75■■■□□ 2.35
PAX6-276ENST00000640684 NACADO15069 1562 aa29.63■■■□□ 2.33
PAX6-276ENST00000640684 SHROOM4Q9ULL8 1493 aa29.48■■■□□ 2.31
PAX6-276ENST00000640684 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
PAX6-276ENST00000640684 SCRIBQ14160 1630 aa29.14■■■□□ 2.25
PAX6-276ENST00000640684 UNC13AQ9UPW8 1703 aa28.74■■■□□ 2.19
PAX6-276ENST00000640684 PABPN1Q86U42 306 aaKnown RBP eCLIP28.46■■■□□ 2.15
PAX6-276ENST00000640684 BICRAQ9NZM4 1560 aa28.46■■■□□ 2.15
PAX6-276ENST00000640684 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
PAX6-276ENST00000640684 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
PAX6-276ENST00000640684 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
PAX6-276ENST00000640684 BAZ1AQ9NRL2 1556 aaPredicted RBP28.05■■■□□ 2.08
PAX6-276ENST00000640684 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
PAX6-276ENST00000640684 SMARCA4P51532 1647 aa27.92■■■□□ 2.06
PAX6-276ENST00000640684 WIZO95785 1651 aa27.77■■■□□ 2.04
PAX6-276ENST00000640684 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
PAX6-276ENST00000640684 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
PAX6-276ENST00000640684 SMARCA2P51531 1590 aa27.54■■■□□ 2
PAX6-276ENST00000640684 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
PAX6-276ENST00000640684 TOP2AP11388 1531 aaKnown RBP27.49■■□□□ 1.99
PAX6-276ENST00000640684 BAZ1BQ9UIG0 1483 aaKnown RBP27.39■■□□□ 1.97
PAX6-276ENST00000640684 NCAPD3P42695 1498 aa27.35■■□□□ 1.97
PAX6-276ENST00000640684 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
PAX6-276ENST00000640684 HMGXB3Q12766 1538 aa27.26■■□□□ 1.95
PAX6-276ENST00000640684 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
PAX6-276ENST00000640684 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.92
PAX6-276ENST00000640684 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
PAX6-276ENST00000640684 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
PAX6-276ENST00000640684 CFTRP13569 1480 aa26.67■■□□□ 1.86
PAX6-276ENST00000640684 CADPSQ9ULU8 1353 aa26.66■■□□□ 1.86
PAX6-276ENST00000640684 ABCC8Q09428 1581 aa26.55■■□□□ 1.84
PAX6-276ENST00000640684 PRDM2Q13029 1718 aa26.5■■□□□ 1.83
PAX6-276ENST00000640684 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
PAX6-276ENST00000640684 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
PAX6-276ENST00000640684 NESP48681 1621 aa26.41■■□□□ 1.82
PAX6-276ENST00000640684 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
PAX6-276ENST00000640684 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
PAX6-276ENST00000640684 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
PAX6-276ENST00000640684 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
PAX6-276ENST00000640684 BIVM-ERCC5R4GMW8 1640 aa26.2■■□□□ 1.78
PAX6-276ENST00000640684 CUX1P39880 1505 aa26.2■■□□□ 1.78
PAX6-276ENST00000640684 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
PAX6-276ENST00000640684 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
PAX6-276ENST00000640684 KIF21AQ7Z4S6 1674 aa26.08■■□□□ 1.77
PAX6-276ENST00000640684 DNMBPQ6XZF7 1577 aa26.05■■□□□ 1.76
PAX6-276ENST00000640684 SOGA1O94964 1423 aa26.05■■□□□ 1.76
PAX6-276ENST00000640684 EEA1Q15075 1411 aa26.02■■□□□ 1.76
PAX6-276ENST00000640684 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
PAX6-276ENST00000640684 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
PAX6-276ENST00000640684 LOC105371045A0A1W2PR82 267 aa25.97■■□□□ 1.75
PAX6-276ENST00000640684 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
PAX6-276ENST00000640684 ERCC6Q03468 1493 aa25.95■■□□□ 1.74
PAX6-276ENST00000640684 RUSC2Q8N2Y8 1516 aa25.94■■□□□ 1.74
PAX6-276ENST00000640684 CSRNP3Q8WYN3 585 aa25.93■■□□□ 1.74
PAX6-276ENST00000640684 MRC2Q9UBG0 1479 aa25.92■■□□□ 1.74
PAX6-276ENST00000640684 POLA1P09884 1462 aaPredicted RBP25.86■■□□□ 1.73
PAX6-276ENST00000640684 KIF27Q86VH2 1401 aa25.84■■□□□ 1.73
PAX6-276ENST00000640684 CUX2O14529 1486 aa25.79■■□□□ 1.72
PAX6-276ENST00000640684 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
PAX6-276ENST00000640684 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
PAX6-276ENST00000640684 WDR62O43379 1518 aa25.76■■□□□ 1.71
PAX6-276ENST00000640684 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
PAX6-276ENST00000640684 THOC2Q8NI27 1593 aaKnown RBP25.68■■□□□ 1.7
PAX6-276ENST00000640684 KIF21BO75037 1637 aa25.63■■□□□ 1.69
PAX6-276ENST00000640684 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
PAX6-276ENST00000640684 IGF1RP08069 1367 aa25.62■■□□□ 1.69
PAX6-276ENST00000640684 TARBP1Q13395 1621 aaKnown RBP25.62■■□□□ 1.69
PAX6-276ENST00000640684 UBTFP17480 764 aaKnown RBP25.61■■□□□ 1.69
PAX6-276ENST00000640684 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
PAX6-276ENST00000640684 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
PAX6-276ENST00000640684 TDRD9Q8NDG6 1382 aaKnown RBP25.58■■□□□ 1.69
PAX6-276ENST00000640684 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
PAX6-276ENST00000640684 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
PAX6-276ENST00000640684 TNIKQ9UKE5 1360 aa25.53■■□□□ 1.68
PAX6-276ENST00000640684 RAPGEF2Q9Y4G8 1499 aa25.52■■□□□ 1.68
PAX6-276ENST00000640684 ERICH3Q5RHP9 1530 aa25.51■■□□□ 1.67
PAX6-276ENST00000640684 CARMIL1Q5VZK9 1371 aa25.51■■□□□ 1.67
PAX6-276ENST00000640684 ABCA5Q8WWZ7 1642 aa25.5■■□□□ 1.67
PAX6-276ENST00000640684 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.66
PAX6-276ENST00000640684 CUL7Q14999 1698 aa25.41■■□□□ 1.66
PAX6-276ENST00000640684 ZNF608Q9ULD9 1512 aaPredicted RBP25.4■■□□□ 1.66
PAX6-276ENST00000640684 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
PAX6-276ENST00000640684 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
PAX6-276ENST00000640684 CEP162Q5TB80 1403 aa25.34■■□□□ 1.65
PAX6-276ENST00000640684 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
PAX6-276ENST00000640684 FHAD1B1AJZ9 1412 aa25.26■■□□□ 1.63
PAX6-276ENST00000640684 CLIP1P30622 1438 aa25.22■■□□□ 1.63
PAX6-276ENST00000640684 RANGAP1P46060 587 aaPredicted RBP25.21■■□□□ 1.63
PAX6-276ENST00000640684 ADAMTS12P58397 1594 aa25.19■■□□□ 1.62
PAX6-276ENST00000640684 SNAPC4Q5SXM2 1469 aa25.18■■□□□ 1.62
PAX6-276ENST00000640684 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
PAX6-276ENST00000640684 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
PAX6-276ENST00000640684 CTTNBP2Q8WZ74 1663 aa25.08■■□□□ 1.61
PAX6-276ENST00000640684 SYNJ2O15056 1496 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms