RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
PAX6-272ENST00000640460 CCDC180Q9P1Z9 1646 aa27.15■■□□□ 1.94
PAX6-272ENST00000640460 ABCC9O60706 1549 aa26.68■■□□□ 1.86
PAX6-272ENST00000640460 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
PAX6-272ENST00000640460 NACADO15069 1562 aa25.52■■□□□ 1.68
PAX6-272ENST00000640460 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
PAX6-272ENST00000640460 ZCCHC6Q5VYS8 1495 aaKnown RBP25.31■■□□□ 1.64
PAX6-272ENST00000640460 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
PAX6-272ENST00000640460 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
PAX6-272ENST00000640460 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.61
PAX6-272ENST00000640460 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.57
PAX6-272ENST00000640460 BICRAQ9NZM4 1560 aa24.88■■□□□ 1.57
PAX6-272ENST00000640460 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
PAX6-272ENST00000640460 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
PAX6-272ENST00000640460 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.51
PAX6-272ENST00000640460 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
PAX6-272ENST00000640460 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
PAX6-272ENST00000640460 CECR2Q9BXF3 1484 aa23.98■■□□□ 1.43
PAX6-272ENST00000640460 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
PAX6-272ENST00000640460 BAZ1AQ9NRL2 1556 aaPredicted RBP23.57■■□□□ 1.36
PAX6-272ENST00000640460 NCAPD3P42695 1498 aa23.54■■□□□ 1.36
PAX6-272ENST00000640460 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
PAX6-272ENST00000640460 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
PAX6-272ENST00000640460 MROH2BQ7Z745 1585 aa23.46■■□□□ 1.35
PAX6-272ENST00000640460 HMGXB3Q12766 1538 aa23.43■■□□□ 1.34
PAX6-272ENST00000640460 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
PAX6-272ENST00000640460 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.32
PAX6-272ENST00000640460 WIZO95785 1651 aa23.23■■□□□ 1.31
PAX6-272ENST00000640460 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
PAX6-272ENST00000640460 NESP48681 1621 aa23.07■■□□□ 1.28
PAX6-272ENST00000640460 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
PAX6-272ENST00000640460 LAMC3Q9Y6N6 1575 aa22.97■■□□□ 1.27
PAX6-272ENST00000640460 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
PAX6-272ENST00000640460 KIF21AQ7Z4S6 1674 aa22.84■■□□□ 1.25
PAX6-272ENST00000640460 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
PAX6-272ENST00000640460 CUX2O14529 1486 aa22.81■■□□□ 1.24
PAX6-272ENST00000640460 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
PAX6-272ENST00000640460 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
PAX6-272ENST00000640460 CFTRP13569 1480 aa22.67■■□□□ 1.22
PAX6-272ENST00000640460 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
PAX6-272ENST00000640460 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
PAX6-272ENST00000640460 FANCD2Q9BXW9 1451 aa22.59■■□□□ 1.21
PAX6-272ENST00000640460 MRC2Q9UBG0 1479 aa22.57■■□□□ 1.2
PAX6-272ENST00000640460 CEP164Q9UPV0 1460 aa22.57■■□□□ 1.2
PAX6-272ENST00000640460 SUPT5HO00267 1087 aaKnown RBP22.57■■□□□ 1.2
PAX6-272ENST00000640460 WDR62O43379 1518 aa22.53■■□□□ 1.2
PAX6-272ENST00000640460 URB2Q14146 1524 aaKnown RBP22.4■■□□□ 1.18
PAX6-272ENST00000640460 DNAJC5Q9H3Z4 198 aa22.28■■□□□ 1.16
PAX6-272ENST00000640460 TOPBP1Q92547 1522 aa22.23■■□□□ 1.15
PAX6-272ENST00000640460 DNMBPQ6XZF7 1577 aa22.19■■□□□ 1.14
PAX6-272ENST00000640460 ABCC8Q09428 1581 aa22.16■■□□□ 1.14
PAX6-272ENST00000640460 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
PAX6-272ENST00000640460 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
PAX6-272ENST00000640460 TARBP1Q13395 1621 aaKnown RBP22.03■■□□□ 1.12
PAX6-272ENST00000640460 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
PAX6-272ENST00000640460 CUX1P39880 1505 aa22.02■■□□□ 1.12
PAX6-272ENST00000640460 EIF4G3O43432 1585 aaKnown RBP21.98■■□□□ 1.11
PAX6-272ENST00000640460 FGD5Q6ZNL6 1462 aa21.95■■□□□ 1.1
PAX6-272ENST00000640460 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
PAX6-272ENST00000640460 SOGA1O94964 1423 aa21.9■■□□□ 1.1
PAX6-272ENST00000640460 AQRO60306 1485 aaKnown RBP eCLIP21.89■■□□□ 1.09
PAX6-272ENST00000640460 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
PAX6-272ENST00000640460 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
PAX6-272ENST00000640460 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
PAX6-272ENST00000640460 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
PAX6-272ENST00000640460 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
PAX6-272ENST00000640460 TOP2BQ02880 1626 aa21.78■■□□□ 1.08
PAX6-272ENST00000640460 CHD1O14646 1710 aa21.77■■□□□ 1.08
PAX6-272ENST00000640460 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
PAX6-272ENST00000640460 ABCA10Q8WWZ4 1543 aa21.72■■□□□ 1.07
PAX6-272ENST00000640460 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
PAX6-272ENST00000640460 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
PAX6-272ENST00000640460 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
PAX6-272ENST00000640460 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
PAX6-272ENST00000640460 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
PAX6-272ENST00000640460 MAGI1Q96QZ7 1491 aaPredicted RBP21.63■■□□□ 1.05
PAX6-272ENST00000640460 FBLN2P98095 1184 aa21.6■■□□□ 1.05
PAX6-272ENST00000640460 RIMBP3CA6NJZ7 1639 aa21.56■■□□□ 1.04
PAX6-272ENST00000640460 RIMBP3BA6NNM3 1639 aa21.56■■□□□ 1.04
PAX6-272ENST00000640460 RIMBP3Q9UFD9 1639 aa21.56■■□□□ 1.04
PAX6-272ENST00000640460 SYNJ2O15056 1496 aa21.55■■□□□ 1.04
PAX6-272ENST00000640460 CHMP7Q8WUX9 453 aaPredicted RBP21.51■■□□□ 1.03
PAX6-272ENST00000640460 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
PAX6-272ENST00000640460 CLASP1Q7Z460 1538 aa21.49■■□□□ 1.03
PAX6-272ENST00000640460 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
PAX6-272ENST00000640460 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
PAX6-272ENST00000640460 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
PAX6-272ENST00000640460 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
PAX6-272ENST00000640460 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
PAX6-272ENST00000640460 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
PAX6-272ENST00000640460 ARAP1Q96P48 1450 aa21.33■■□□□ 1
PAX6-272ENST00000640460 NUP160Q12769 1436 aa21.31■■□□□ 1
PAX6-272ENST00000640460 KIF27Q86VH2 1401 aa21.3■■□□□ 1
PAX6-272ENST00000640460 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
PAX6-272ENST00000640460 CUL7Q14999 1698 aa21.26■□□□□ 0.99
PAX6-272ENST00000640460 IGF1RP08069 1367 aa21.25■□□□□ 0.99
PAX6-272ENST00000640460 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
PAX6-272ENST00000640460 ERCC6L2Q5T890 1561 aa21.2■□□□□ 0.98
PAX6-272ENST00000640460 RUSC2Q8N2Y8 1516 aa21.18■□□□□ 0.98
PAX6-272ENST00000640460 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms