RNA–Protein interactions for RNA: ENST00000640290.1

EIF3F-209, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 5 BASIC

Gene EIF3F, Length 372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-209ENST00000640290 NISCHQ9Y2I1 1504 aa32.38■■■□□ 2.77
EIF3F-209ENST00000640290 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.18
EIF3F-209ENST00000640290 ABCC9O60706 1549 aa27.34■■□□□ 1.97
EIF3F-209ENST00000640290 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
EIF3F-209ENST00000640290 DCAF8L2P0C7V8 631 aa26.84■■□□□ 1.89
EIF3F-209ENST00000640290 DCAF1Q9Y4B6 1507 aa26.83■■□□□ 1.89
EIF3F-209ENST00000640290 NACADO15069 1562 aa26.73■■□□□ 1.87
EIF3F-209ENST00000640290 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
EIF3F-209ENST00000640290 RB1CC1Q8TDY2 1594 aa26.63■■□□□ 1.85
EIF3F-209ENST00000640290 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.77
EIF3F-209ENST00000640290 SCRIBQ14160 1630 aa26.13■■□□□ 1.77
EIF3F-209ENST00000640290 SHROOM4Q9ULL8 1493 aa25.94■■□□□ 1.74
EIF3F-209ENST00000640290 BICRAQ9NZM4 1560 aa25.73■■□□□ 1.71
EIF3F-209ENST00000640290 PABPN1Q86U42 306 aaKnown RBP eCLIP25.61■■□□□ 1.69
EIF3F-209ENST00000640290 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
EIF3F-209ENST00000640290 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
EIF3F-209ENST00000640290 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
EIF3F-209ENST00000640290 EIF4G1Q04637 1599 aaKnown RBP25.03■■□□□ 1.6
EIF3F-209ENST00000640290 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
EIF3F-209ENST00000640290 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
EIF3F-209ENST00000640290 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
EIF3F-209ENST00000640290 WIZO95785 1651 aa24.79■■□□□ 1.56
EIF3F-209ENST00000640290 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
EIF3F-209ENST00000640290 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
EIF3F-209ENST00000640290 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
EIF3F-209ENST00000640290 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.54
EIF3F-209ENST00000640290 NCAPD3P42695 1498 aa24.58■■□□□ 1.53
EIF3F-209ENST00000640290 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.52
EIF3F-209ENST00000640290 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
EIF3F-209ENST00000640290 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
EIF3F-209ENST00000640290 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
EIF3F-209ENST00000640290 CCDC88BA6NC98 1476 aa24.2■■□□□ 1.47
EIF3F-209ENST00000640290 PRDM2Q13029 1718 aa23.99■■□□□ 1.43
EIF3F-209ENST00000640290 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
EIF3F-209ENST00000640290 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
EIF3F-209ENST00000640290 CFTRP13569 1480 aa23.89■■□□□ 1.42
EIF3F-209ENST00000640290 NESP48681 1621 aa23.81■■□□□ 1.4
EIF3F-209ENST00000640290 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
EIF3F-209ENST00000640290 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
EIF3F-209ENST00000640290 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
EIF3F-209ENST00000640290 CEP164Q9UPV0 1460 aa23.59■■□□□ 1.37
EIF3F-209ENST00000640290 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
EIF3F-209ENST00000640290 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
EIF3F-209ENST00000640290 WRNQ14191 1432 aaPredicted RBP eCLIP23.46■■□□□ 1.35
EIF3F-209ENST00000640290 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
EIF3F-209ENST00000640290 BIVM-ERCC5R4GMW8 1640 aa23.41■■□□□ 1.34
EIF3F-209ENST00000640290 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
EIF3F-209ENST00000640290 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
EIF3F-209ENST00000640290 TOP2BQ02880 1626 aa23.39■■□□□ 1.33
EIF3F-209ENST00000640290 SYNJ1O43426 1573 aa23.39■■□□□ 1.33
EIF3F-209ENST00000640290 THOC2Q8NI27 1593 aaKnown RBP23.39■■□□□ 1.33
EIF3F-209ENST00000640290 CUX1P39880 1505 aa23.38■■□□□ 1.33
EIF3F-209ENST00000640290 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
EIF3F-209ENST00000640290 TOPBP1Q92547 1522 aa23.35■■□□□ 1.33
EIF3F-209ENST00000640290 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
EIF3F-209ENST00000640290 WDR62O43379 1518 aa23.33■■□□□ 1.32
EIF3F-209ENST00000640290 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
EIF3F-209ENST00000640290 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
EIF3F-209ENST00000640290 SOGA1O94964 1423 aa23.11■■□□□ 1.29
EIF3F-209ENST00000640290 CUX2O14529 1486 aa23.08■■□□□ 1.29
EIF3F-209ENST00000640290 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
EIF3F-209ENST00000640290 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
EIF3F-209ENST00000640290 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
EIF3F-209ENST00000640290 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
EIF3F-209ENST00000640290 ABCA10Q8WWZ4 1543 aa23.03■■□□□ 1.28
EIF3F-209ENST00000640290 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
EIF3F-209ENST00000640290 EEA1Q15075 1411 aa22.92■■□□□ 1.26
EIF3F-209ENST00000640290 ABCA5Q8WWZ7 1642 aa22.91■■□□□ 1.26
EIF3F-209ENST00000640290 PBRM1Q86U86 1689 aa22.89■■□□□ 1.25
EIF3F-209ENST00000640290 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
EIF3F-209ENST00000640290 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
EIF3F-209ENST00000640290 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
EIF3F-209ENST00000640290 GAPVD1Q14C86 1478 aa22.86■■□□□ 1.25
EIF3F-209ENST00000640290 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
EIF3F-209ENST00000640290 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
EIF3F-209ENST00000640290 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.24
EIF3F-209ENST00000640290 ERICH3Q5RHP9 1530 aa22.79■■□□□ 1.24
EIF3F-209ENST00000640290 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
EIF3F-209ENST00000640290 GRIN2BQ13224 1484 aa22.77■■□□□ 1.24
EIF3F-209ENST00000640290 CUL7Q14999 1698 aa22.77■■□□□ 1.24
EIF3F-209ENST00000640290 IGF1RP08069 1367 aa22.72■■□□□ 1.23
EIF3F-209ENST00000640290 KIF21BO75037 1637 aa22.67■■□□□ 1.22
EIF3F-209ENST00000640290 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
EIF3F-209ENST00000640290 ADAMTS12P58397 1594 aa22.65■■□□□ 1.22
EIF3F-209ENST00000640290 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
EIF3F-209ENST00000640290 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
EIF3F-209ENST00000640290 PRXQ9BXM0 1461 aa22.61■■□□□ 1.21
EIF3F-209ENST00000640290 FHAD1B1AJZ9 1412 aa22.61■■□□□ 1.21
EIF3F-209ENST00000640290 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
EIF3F-209ENST00000640290 CHD1O14646 1710 aa22.56■■□□□ 1.2
EIF3F-209ENST00000640290 SYNJ2O15056 1496 aa22.55■■□□□ 1.2
EIF3F-209ENST00000640290 GOLGA3Q08378 1498 aa22.55■■□□□ 1.2
EIF3F-209ENST00000640290 CHMP7Q8WUX9 453 aaPredicted RBP22.5■■□□□ 1.19
EIF3F-209ENST00000640290 EHMT2Q96KQ7 1210 aa22.48■■□□□ 1.19
EIF3F-209ENST00000640290 CTTNBP2Q8WZ74 1663 aa22.48■■□□□ 1.19
EIF3F-209ENST00000640290 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
EIF3F-209ENST00000640290 FBLN2P98095 1184 aa22.47■■□□□ 1.19
EIF3F-209ENST00000640290 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
EIF3F-209ENST00000640290 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
EIF3F-209ENST00000640290 TNIKQ9UKE5 1360 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms