RNA–Protein interactions for RNA: ENST00000640094.1

HLA-B-257, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 147 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-257ENST00000640094 NISCHQ9Y2I1 1504 aa22.24■■□□□ 1.15
HLA-B-257ENST00000640094 ABCC9O60706 1549 aa20.39■□□□□ 0.85
HLA-B-257ENST00000640094 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
HLA-B-257ENST00000640094 RB1CC1Q8TDY2 1594 aa19.4■□□□□ 0.7
HLA-B-257ENST00000640094 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
HLA-B-257ENST00000640094 NACADO15069 1562 aa19.17■□□□□ 0.66
HLA-B-257ENST00000640094 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
HLA-B-257ENST00000640094 MYO15BQ96JP2 1530 aa18.8■□□□□ 0.6
HLA-B-257ENST00000640094 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
HLA-B-257ENST00000640094 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
HLA-B-257ENST00000640094 DCAF8L2P0C7V8 631 aa18.71■□□□□ 0.59
HLA-B-257ENST00000640094 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
HLA-B-257ENST00000640094 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
HLA-B-257ENST00000640094 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
HLA-B-257ENST00000640094 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
HLA-B-257ENST00000640094 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
HLA-B-257ENST00000640094 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
HLA-B-257ENST00000640094 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
HLA-B-257ENST00000640094 DNAJC5Q9H3Z4 198 aa18■□□□□ 0.47
HLA-B-257ENST00000640094 CUX2O14529 1486 aa17.82■□□□□ 0.44
HLA-B-257ENST00000640094 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
HLA-B-257ENST00000640094 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
HLA-B-257ENST00000640094 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
HLA-B-257ENST00000640094 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
HLA-B-257ENST00000640094 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
HLA-B-257ENST00000640094 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
HLA-B-257ENST00000640094 THOC2Q8NI27 1593 aaKnown RBP17.45■□□□□ 0.38
HLA-B-257ENST00000640094 NESP48681 1621 aa17.4■□□□□ 0.38
HLA-B-257ENST00000640094 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
HLA-B-257ENST00000640094 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
HLA-B-257ENST00000640094 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
HLA-B-257ENST00000640094 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
HLA-B-257ENST00000640094 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
HLA-B-257ENST00000640094 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
HLA-B-257ENST00000640094 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
HLA-B-257ENST00000640094 WDR62O43379 1518 aa17.11■□□□□ 0.33
HLA-B-257ENST00000640094 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
HLA-B-257ENST00000640094 TRIM41Q8WV44 630 aa17.07■□□□□ 0.32
HLA-B-257ENST00000640094 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.31
HLA-B-257ENST00000640094 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
HLA-B-257ENST00000640094 WIZO95785 1651 aa16.93■□□□□ 0.3
HLA-B-257ENST00000640094 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
HLA-B-257ENST00000640094 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
HLA-B-257ENST00000640094 CFTRP13569 1480 aa16.8■□□□□ 0.28
HLA-B-257ENST00000640094 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
HLA-B-257ENST00000640094 RIMBP3CA6NJZ7 1639 aa16.76■□□□□ 0.27
HLA-B-257ENST00000640094 RIMBP3BA6NNM3 1639 aa16.76■□□□□ 0.27
HLA-B-257ENST00000640094 RIMBP3Q9UFD9 1639 aa16.76■□□□□ 0.27
HLA-B-257ENST00000640094 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
HLA-B-257ENST00000640094 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
HLA-B-257ENST00000640094 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
HLA-B-257ENST00000640094 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
HLA-B-257ENST00000640094 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
HLA-B-257ENST00000640094 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.24
HLA-B-257ENST00000640094 CHD1O14646 1710 aa16.56■□□□□ 0.24
HLA-B-257ENST00000640094 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
HLA-B-257ENST00000640094 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
HLA-B-257ENST00000640094 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
HLA-B-257ENST00000640094 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
HLA-B-257ENST00000640094 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
HLA-B-257ENST00000640094 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
HLA-B-257ENST00000640094 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
HLA-B-257ENST00000640094 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
HLA-B-257ENST00000640094 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
HLA-B-257ENST00000640094 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
HLA-B-257ENST00000640094 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
HLA-B-257ENST00000640094 AQRO60306 1485 aaKnown RBP eCLIP16.34■□□□□ 0.21
HLA-B-257ENST00000640094 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
HLA-B-257ENST00000640094 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
HLA-B-257ENST00000640094 FBLN2P98095 1184 aa16.27■□□□□ 0.2
HLA-B-257ENST00000640094 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
HLA-B-257ENST00000640094 MAGI1Q96QZ7 1491 aaPredicted RBP16.25■□□□□ 0.19
HLA-B-257ENST00000640094 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
HLA-B-257ENST00000640094 RAD54L2Q9Y4B4 1467 aa16.21■□□□□ 0.19
HLA-B-257ENST00000640094 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
HLA-B-257ENST00000640094 SOGA1O94964 1423 aa16.19■□□□□ 0.18
HLA-B-257ENST00000640094 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
HLA-B-257ENST00000640094 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
HLA-B-257ENST00000640094 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
HLA-B-257ENST00000640094 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
HLA-B-257ENST00000640094 CUX1P39880 1505 aa16.11■□□□□ 0.17
HLA-B-257ENST00000640094 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
HLA-B-257ENST00000640094 GAPVD1Q14C86 1478 aa16.1■□□□□ 0.17
HLA-B-257ENST00000640094 ABCA5Q8WWZ7 1642 aa16.08■□□□□ 0.17
HLA-B-257ENST00000640094 ABCA10Q8WWZ4 1543 aa16■□□□□ 0.15
HLA-B-257ENST00000640094 ADAMTS12P58397 1594 aa16■□□□□ 0.15
HLA-B-257ENST00000640094 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
HLA-B-257ENST00000640094 SHROOM2Q13796 1616 aa15.96■□□□□ 0.15
HLA-B-257ENST00000640094 CEP170Q5SW79 1584 aa15.96■□□□□ 0.14
HLA-B-257ENST00000640094 KIF13AQ9H1H9 1805 aa15.95■□□□□ 0.14
HLA-B-257ENST00000640094 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
HLA-B-257ENST00000640094 NUP160Q12769 1436 aa15.91■□□□□ 0.14
HLA-B-257ENST00000640094 BIVM-ERCC5R4GMW8 1640 aa15.88■□□□□ 0.13
HLA-B-257ENST00000640094 WRNQ14191 1432 aaPredicted RBP eCLIP15.85■□□□□ 0.13
HLA-B-257ENST00000640094 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
HLA-B-257ENST00000640094 TOP2BQ02880 1626 aa15.83■□□□□ 0.13
HLA-B-257ENST00000640094 FHAD1B1AJZ9 1412 aa15.83■□□□□ 0.12
HLA-B-257ENST00000640094 RUSC2Q8N2Y8 1516 aa15.79■□□□□ 0.12
HLA-B-257ENST00000640094 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
HLA-B-257ENST00000640094 DIP2BQ9P265 1576 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms