RNA–Protein interactions for RNA: ENST00000639457.1

MED17-218, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 1,798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-218ENST00000639457 NISCHQ9Y2I1 1504 aa56.18■■■■■ 6.58
MED17-218ENST00000639457 CCDC180Q9P1Z9 1646 aa49.12■■■■■ 5.45
MED17-218ENST00000639457 ZCCHC6Q5VYS8 1495 aaKnown RBP47.15■■■■■ 5.14
MED17-218ENST00000639457 ABCC9O60706 1549 aa46.56■■■■■ 5.04
MED17-218ENST00000639457 DCAF1Q9Y4B6 1507 aa46.51■■■■■ 5.04
MED17-218ENST00000639457 DCAF8L2P0C7V8 631 aa46.45■■■■■ 5.03
MED17-218ENST00000639457 MYO15BQ96JP2 1530 aa46.05■■■■■ 4.96
MED17-218ENST00000639457 NACADO15069 1562 aa45.82■■■■■ 4.92
MED17-218ENST00000639457 SHROOM4Q9ULL8 1493 aa45.6■■■■■ 4.89
MED17-218ENST00000639457 RB1CC1Q8TDY2 1594 aa45.46■■■■■ 4.87
MED17-218ENST00000639457 SCRIBQ14160 1630 aa45.07■■■■■ 4.81
MED17-218ENST00000639457 UNC13AQ9UPW8 1703 aa44.43■■■■■ 4.7
MED17-218ENST00000639457 BICRAQ9NZM4 1560 aa44■■■■■ 4.63
MED17-218ENST00000639457 PABPN1Q86U42 306 aaKnown RBP eCLIP43.85■■■■■ 4.61
MED17-218ENST00000639457 SUPT5HO00267 1087 aaKnown RBP43.82■■■■■ 4.6
MED17-218ENST00000639457 CECR2Q9BXF3 1484 aa43.6■■■■■ 4.57
MED17-218ENST00000639457 RSF1Q96T23 1441 aaPredicted RBP43.49■■■■■ 4.55
MED17-218ENST00000639457 BAZ1AQ9NRL2 1556 aaPredicted RBP43.43■■■■■ 4.54
MED17-218ENST00000639457 MROH2BQ7Z745 1585 aa43.35■■■■■ 4.53
MED17-218ENST00000639457 SMARCA4P51532 1647 aa43.22■■■■■ 4.51
MED17-218ENST00000639457 WIZO95785 1651 aa42.98■■■■■ 4.47
MED17-218ENST00000639457 EIF4G1Q04637 1599 aaKnown RBP42.73■■■■■ 4.43
MED17-218ENST00000639457 PEG3Q9GZU2 1588 aa42.73■■■■■ 4.43
MED17-218ENST00000639457 SMARCA2P51531 1590 aa42.59■■■■■ 4.41
MED17-218ENST00000639457 TOP2AP11388 1531 aaKnown RBP42.59■■■■■ 4.41
MED17-218ENST00000639457 ATAD2BQ9ULI0 1458 aa42.56■■■■■ 4.4
MED17-218ENST00000639457 BAZ1BQ9UIG0 1483 aaKnown RBP42.34■■■■■ 4.37
MED17-218ENST00000639457 NCAPD3P42695 1498 aa42.27■■■■■ 4.36
MED17-218ENST00000639457 HMGXB3Q12766 1538 aa42.19■■■■■ 4.35
MED17-218ENST00000639457 CC2D2AQ9P2K1 1620 aa42.15■■■■■ 4.34
MED17-218ENST00000639457 CCDC88BA6NC98 1476 aa42.12■■■■■ 4.33
MED17-218ENST00000639457 CHIC1Q5VXU3 224 aa41.84■■■■■ 4.29
MED17-218ENST00000639457 TRIM41Q8WV44 630 aa41.28■■■■■ 4.2
MED17-218ENST00000639457 CFTRP13569 1480 aa41.26■■■■■ 4.2
MED17-218ENST00000639457 CADPSQ9ULU8 1353 aa41.17■■■■■ 4.18
MED17-218ENST00000639457 DNAJC5BQ9UF47 199 aa41.17■■■■■ 4.18
MED17-218ENST00000639457 ABCC8Q09428 1581 aa41.12■■■■■ 4.17
MED17-218ENST00000639457 PRDM2Q13029 1718 aa41.04■■■■■ 4.16
MED17-218ENST00000639457 WRNQ14191 1432 aaPredicted RBP eCLIP40.97■■■■■ 4.15
MED17-218ENST00000639457 LAMC3Q9Y6N6 1575 aa40.87■■■■■ 4.13
MED17-218ENST00000639457 NESP48681 1621 aa40.78■■■■■ 4.12
MED17-218ENST00000639457 SYNJ1O43426 1573 aa40.75■■■■■ 4.11
MED17-218ENST00000639457 FANCD2Q9BXW9 1451 aa40.69■■■■■ 4.11
MED17-218ENST00000639457 TOP2BQ02880 1626 aa40.65■■■■■ 4.1
MED17-218ENST00000639457 BIVM-ERCC5R4GMW8 1640 aa40.61■■■■■ 4.09
MED17-218ENST00000639457 PDS5BQ9NTI5 1447 aa40.59■■■■■ 4.09
MED17-218ENST00000639457 CUX1P39880 1505 aa40.56■■■■■ 4.08
MED17-218ENST00000639457 CEP164Q9UPV0 1460 aa40.48■■■■■ 4.07
MED17-218ENST00000639457 FAM9AQ8IZU1 332 aaPredicted RBP40.43■■■■■ 4.06
MED17-218ENST00000639457 EEA1Q15075 1411 aa40.34■■■■■ 4.05
MED17-218ENST00000639457 SOGA1O94964 1423 aa40.33■■■■■ 4.05
MED17-218ENST00000639457 KIF21AQ7Z4S6 1674 aa40.31■■■■■ 4.04
MED17-218ENST00000639457 DNMBPQ6XZF7 1577 aa40.3■■■■■ 4.04
MED17-218ENST00000639457 TOPBP1Q92547 1522 aa40.23■■■■■ 4.03
MED17-218ENST00000639457 LOC105371045A0A1W2PR82 267 aa40.19■■■■■ 4.02
MED17-218ENST00000639457 FGD5Q6ZNL6 1462 aa40.17■■■■■ 4.02
MED17-218ENST00000639457 URB2Q14146 1524 aaKnown RBP40.16■■■■■ 4.02
MED17-218ENST00000639457 RUSC2Q8N2Y8 1516 aa40.15■■■■■ 4.02
MED17-218ENST00000639457 CSRNP3Q8WYN3 585 aa40.08■■■■■ 4.01
MED17-218ENST00000639457 MRC2Q9UBG0 1479 aa40.04■■■■■ 4
MED17-218ENST00000639457 POLA1P09884 1462 aaPredicted RBP40.01■■■■■ 4
MED17-218ENST00000639457 ERCC6Q03468 1493 aa40.01■■■■■ 4
MED17-218ENST00000639457 KIF27Q86VH2 1401 aa39.99■■■■□ 3.99
MED17-218ENST00000639457 CUX2O14529 1486 aa39.88■■■■□ 3.97
MED17-218ENST00000639457 RAD54L2Q9Y4B4 1467 aa39.84■■■■□ 3.97
MED17-218ENST00000639457 ABCA10Q8WWZ4 1543 aa39.83■■■■□ 3.97
MED17-218ENST00000639457 WDR62O43379 1518 aa39.83■■■■□ 3.97
MED17-218ENST00000639457 EHMT2Q96KQ7 1210 aa39.82■■■■□ 3.97
MED17-218ENST00000639457 KIF21BO75037 1637 aa39.77■■■■□ 3.96
MED17-218ENST00000639457 GOLGA3Q08378 1498 aa39.73■■■■□ 3.95
MED17-218ENST00000639457 THOC2Q8NI27 1593 aaKnown RBP39.71■■■■□ 3.95
MED17-218ENST00000639457 WDR97A6NE52 1622 aa39.68■■■■□ 3.94
MED17-218ENST00000639457 TARBP1Q13395 1621 aaKnown RBP39.62■■■■□ 3.93
MED17-218ENST00000639457 PRXQ9BXM0 1461 aa39.62■■■■□ 3.93
MED17-218ENST00000639457 IGF1RP08069 1367 aa39.6■■■■□ 3.93
MED17-218ENST00000639457 UBTFP17480 764 aaKnown RBP39.56■■■■□ 3.92
MED17-218ENST00000639457 ERICH3Q5RHP9 1530 aa39.56■■■■□ 3.92
MED17-218ENST00000639457 TNIKQ9UKE5 1360 aa39.56■■■■□ 3.92
MED17-218ENST00000639457 IFT140Q96RY7 1462 aa39.54■■■■□ 3.92
MED17-218ENST00000639457 RAPGEF2Q9Y4G8 1499 aa39.54■■■■□ 3.92
MED17-218ENST00000639457 ABCA5Q8WWZ7 1642 aa39.51■■■■□ 3.92
MED17-218ENST00000639457 TDRD9Q8NDG6 1382 aaKnown RBP39.49■■■■□ 3.91
MED17-218ENST00000639457 GAPVD1Q14C86 1478 aa39.47■■■■□ 3.91
MED17-218ENST00000639457 CARMIL1Q5VZK9 1371 aa39.42■■■■□ 3.9
MED17-218ENST00000639457 CUL7Q14999 1698 aa39.36■■■■□ 3.89
MED17-218ENST00000639457 CEP162Q5TB80 1403 aa39.31■■■■□ 3.88
MED17-218ENST00000639457 AQRO60306 1485 aaKnown RBP eCLIP39.27■■■■□ 3.884e-7■■■□□ 16.8
MED17-218ENST00000639457 ZNF608Q9ULD9 1512 aaPredicted RBP39.24■■■■□ 3.87
MED17-218ENST00000639457 PBRM1Q86U86 1689 aa39.22■■■■□ 3.87
MED17-218ENST00000639457 GRIN2BQ13224 1484 aa39.2■■■■□ 3.87
MED17-218ENST00000639457 EIF4G3O43432 1585 aaKnown RBP39.14■■■■□ 3.86
MED17-218ENST00000639457 CLIP1P30622 1438 aa39.08■■■■□ 3.85
MED17-218ENST00000639457 FHAD1B1AJZ9 1412 aa39.05■■■■□ 3.84
MED17-218ENST00000639457 ADAMTS12P58397 1594 aa39.01■■■■□ 3.83
MED17-218ENST00000639457 SNAPC4Q5SXM2 1469 aa38.93■■■■□ 3.82
MED17-218ENST00000639457 MAGI1Q96QZ7 1491 aaPredicted RBP38.91■■■■□ 3.82
MED17-218ENST00000639457 RANGAP1P46060 587 aaPredicted RBP38.9■■■■□ 3.82
MED17-218ENST00000639457 CTTNBP2Q8WZ74 1663 aa38.85■■■■□ 3.81
MED17-218ENST00000639457 SYNJ2O15056 1496 aa38.74■■■■□ 3.79
MED17-218ENST00000639457 ARHGAP35Q9NRY4 1499 aa38.71■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms