RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, humanhuman

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-222ENST00000639447 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
GRN-222ENST00000639447 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
GRN-222ENST00000639447 ABCC9O60706 1549 aa32.8■■■□□ 2.84
GRN-222ENST00000639447 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
GRN-222ENST00000639447 NACADO15069 1562 aa31.12■■■□□ 2.57
GRN-222ENST00000639447 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
GRN-222ENST00000639447 MYO15BQ96JP2 1530 aa30.73■■■□□ 2.51
GRN-222ENST00000639447 ZCCHC6Q5VYS8 1495 aaKnown RBP30.53■■■□□ 2.48
GRN-222ENST00000639447 UNC13AQ9UPW8 1703 aa30.52■■■□□ 2.48
GRN-222ENST00000639447 DNAJC5BQ9UF47 199 aa30.5■■■□□ 2.47
GRN-222ENST00000639447 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
GRN-222ENST00000639447 DCAF1Q9Y4B6 1507 aa30.39■■■□□ 2.45
GRN-222ENST00000639447 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
GRN-222ENST00000639447 SHROOM4Q9ULL8 1493 aa30.06■■■□□ 2.4
GRN-222ENST00000639447 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
GRN-222ENST00000639447 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
GRN-222ENST00000639447 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
GRN-222ENST00000639447 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
GRN-222ENST00000639447 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
GRN-222ENST00000639447 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
GRN-222ENST00000639447 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.18
GRN-222ENST00000639447 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
GRN-222ENST00000639447 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
GRN-222ENST00000639447 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
GRN-222ENST00000639447 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
GRN-222ENST00000639447 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
GRN-222ENST00000639447 ERCC6Q03468 1493 aa28.36■■■□□ 2.13
GRN-222ENST00000639447 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
GRN-222ENST00000639447 CUX2O14529 1486 aa28.26■■■□□ 2.11
GRN-222ENST00000639447 NESP48681 1621 aa28.19■■■□□ 2.1
GRN-222ENST00000639447 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
GRN-222ENST00000639447 WIZO95785 1651 aa27.97■■■□□ 2.07
GRN-222ENST00000639447 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
GRN-222ENST00000639447 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
GRN-222ENST00000639447 PDS5BQ9NTI5 1447 aa27.9■■■□□ 2.06
GRN-222ENST00000639447 KIF21AQ7Z4S6 1674 aa27.86■■■□□ 2.05
GRN-222ENST00000639447 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
GRN-222ENST00000639447 RSF1Q96T23 1441 aaPredicted RBP27.76■■■□□ 2.03
GRN-222ENST00000639447 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
GRN-222ENST00000639447 MRC2Q9UBG0 1479 aa27.67■■■□□ 2.02
GRN-222ENST00000639447 WDR62O43379 1518 aa27.59■■■□□ 2.01
GRN-222ENST00000639447 CEP164Q9UPV0 1460 aa27.59■■■□□ 2.01
GRN-222ENST00000639447 CFTRP13569 1480 aa27.55■■■□□ 2
GRN-222ENST00000639447 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
GRN-222ENST00000639447 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
GRN-222ENST00000639447 CCDC88BA6NC98 1476 aa27.3■■□□□ 1.96
GRN-222ENST00000639447 URB2Q14146 1524 aaKnown RBP27.29■■□□□ 1.96
GRN-222ENST00000639447 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
GRN-222ENST00000639447 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
GRN-222ENST00000639447 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
GRN-222ENST00000639447 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
GRN-222ENST00000639447 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
GRN-222ENST00000639447 OSCARQ8IYS5 282 aa26.89■■□□□ 1.89
GRN-222ENST00000639447 TRIM41Q8WV44 630 aa26.85■■□□□ 1.89
GRN-222ENST00000639447 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
GRN-222ENST00000639447 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
GRN-222ENST00000639447 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
GRN-222ENST00000639447 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.862e-7■■■■■ 29.1
GRN-222ENST00000639447 FGD5Q6ZNL6 1462 aa26.63■■□□□ 1.85
GRN-222ENST00000639447 RAD54L2Q9Y4B4 1467 aa26.63■■□□□ 1.85
GRN-222ENST00000639447 SOGA1O94964 1423 aa26.61■■□□□ 1.85
GRN-222ENST00000639447 CUX1P39880 1505 aa26.61■■□□□ 1.85
GRN-222ENST00000639447 RIMBP3CA6NJZ7 1639 aa26.59■■□□□ 1.85
GRN-222ENST00000639447 RIMBP3BA6NNM3 1639 aa26.59■■□□□ 1.85
GRN-222ENST00000639447 RIMBP3Q9UFD9 1639 aa26.59■■□□□ 1.85
GRN-222ENST00000639447 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
GRN-222ENST00000639447 CHD1O14646 1710 aa26.58■■□□□ 1.85
GRN-222ENST00000639447 WDR97A6NE52 1622 aa26.58■■□□□ 1.84
GRN-222ENST00000639447 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
GRN-222ENST00000639447 TDRD9Q8NDG6 1382 aaKnown RBP26.53■■□□□ 1.84
GRN-222ENST00000639447 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
GRN-222ENST00000639447 FBLN2P98095 1184 aa26.47■■□□□ 1.83
GRN-222ENST00000639447 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
GRN-222ENST00000639447 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
GRN-222ENST00000639447 PBRM1Q86U86 1689 aa26.33■■□□□ 1.8
GRN-222ENST00000639447 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
GRN-222ENST00000639447 SYNJ1O43426 1573 aa26.32■■□□□ 1.8
GRN-222ENST00000639447 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
GRN-222ENST00000639447 GAPVD1Q14C86 1478 aa26.32■■□□□ 1.8
GRN-222ENST00000639447 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
GRN-222ENST00000639447 CHMP7Q8WUX9 453 aaPredicted RBP26.3■■□□□ 1.8
GRN-222ENST00000639447 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
GRN-222ENST00000639447 ARAP1Q96P48 1450 aa26.28■■□□□ 1.8
GRN-222ENST00000639447 WRNQ14191 1432 aaPredicted RBP eCLIP26.24■■□□□ 1.79
GRN-222ENST00000639447 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
GRN-222ENST00000639447 BIVM-ERCC5R4GMW8 1640 aa26.24■■□□□ 1.79
GRN-222ENST00000639447 TOP2BQ02880 1626 aa26.23■■□□□ 1.79
GRN-222ENST00000639447 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
GRN-222ENST00000639447 GRIN2AQ12879 1464 aa26.08■■□□□ 1.76
GRN-222ENST00000639447 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
GRN-222ENST00000639447 FHAD1B1AJZ9 1412 aa26■■□□□ 1.75
GRN-222ENST00000639447 NUP160Q12769 1436 aa25.98■■□□□ 1.75
GRN-222ENST00000639447 CEP170Q5SW79 1584 aa25.96■■□□□ 1.75
GRN-222ENST00000639447 TRHP20396 242 aaPredicted RBP25.95■■□□□ 1.75
GRN-222ENST00000639447 ERCC6L2Q5T890 1561 aa25.85■■□□□ 1.73
GRN-222ENST00000639447 SHROOM2Q13796 1616 aa25.84■■□□□ 1.73
GRN-222ENST00000639447 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
GRN-222ENST00000639447 KIF27Q86VH2 1401 aa25.73■■□□□ 1.71
GRN-222ENST00000639447 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
GRN-222ENST00000639447 CUL7Q14999 1698 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms