RNA–Protein interactions for RNA: ENST00000639034.1

PAX6-249, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-249ENST00000639034 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
PAX6-249ENST00000639034 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
PAX6-249ENST00000639034 ABCC9O60706 1549 aa25.71■■□□□ 1.71
PAX6-249ENST00000639034 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
PAX6-249ENST00000639034 NACADO15069 1562 aa24.73■■□□□ 1.55
PAX6-249ENST00000639034 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
PAX6-249ENST00000639034 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
PAX6-249ENST00000639034 MYO15BQ96JP2 1530 aa24.58■■□□□ 1.52
PAX6-249ENST00000639034 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
PAX6-249ENST00000639034 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
PAX6-249ENST00000639034 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
PAX6-249ENST00000639034 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
PAX6-249ENST00000639034 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
PAX6-249ENST00000639034 SHROOM4Q9ULL8 1493 aa23.8■■□□□ 1.4
PAX6-249ENST00000639034 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
PAX6-249ENST00000639034 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
PAX6-249ENST00000639034 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
PAX6-249ENST00000639034 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
PAX6-249ENST00000639034 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
PAX6-249ENST00000639034 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
PAX6-249ENST00000639034 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
PAX6-249ENST00000639034 ATAD2BQ9ULI0 1458 aa22.79■■□□□ 1.24
PAX6-249ENST00000639034 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
PAX6-249ENST00000639034 MROH2BQ7Z745 1585 aa22.73■■□□□ 1.23
PAX6-249ENST00000639034 HMGXB3Q12766 1538 aa22.71■■□□□ 1.23
PAX6-249ENST00000639034 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
PAX6-249ENST00000639034 BAZ1BQ9UIG0 1483 aaKnown RBP22.64■■□□□ 1.21
PAX6-249ENST00000639034 WIZO95785 1651 aa22.5■■□□□ 1.19
PAX6-249ENST00000639034 RSF1Q96T23 1441 aaPredicted RBP22.46■■□□□ 1.19
PAX6-249ENST00000639034 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
PAX6-249ENST00000639034 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
PAX6-249ENST00000639034 NESP48681 1621 aa22.22■■□□□ 1.15
PAX6-249ENST00000639034 ERCC6Q03468 1493 aa22.2■■□□□ 1.14
PAX6-249ENST00000639034 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
PAX6-249ENST00000639034 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
PAX6-249ENST00000639034 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
PAX6-249ENST00000639034 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
PAX6-249ENST00000639034 CFTRP13569 1480 aa21.99■■□□□ 1.11
PAX6-249ENST00000639034 CUX2O14529 1486 aa21.97■■□□□ 1.11
PAX6-249ENST00000639034 THOC2Q8NI27 1593 aaKnown RBP21.93■■□□□ 1.1
PAX6-249ENST00000639034 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
PAX6-249ENST00000639034 FANCD2Q9BXW9 1451 aa21.87■■□□□ 1.09
PAX6-249ENST00000639034 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
PAX6-249ENST00000639034 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
PAX6-249ENST00000639034 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
PAX6-249ENST00000639034 WDR62O43379 1518 aa21.77■■□□□ 1.07
PAX6-249ENST00000639034 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
PAX6-249ENST00000639034 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
PAX6-249ENST00000639034 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
PAX6-249ENST00000639034 DNMBPQ6XZF7 1577 aa21.52■■□□□ 1.04
PAX6-249ENST00000639034 IFT140Q96RY7 1462 aa21.41■■□□□ 1.02
PAX6-249ENST00000639034 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
PAX6-249ENST00000639034 CUX1P39880 1505 aa21.34■■□□□ 1.01
PAX6-249ENST00000639034 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
PAX6-249ENST00000639034 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
PAX6-249ENST00000639034 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■□□□□ 0.99
PAX6-249ENST00000639034 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
PAX6-249ENST00000639034 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
PAX6-249ENST00000639034 SOGA1O94964 1423 aa21.24■□□□□ 0.99
PAX6-249ENST00000639034 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
PAX6-249ENST00000639034 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
PAX6-249ENST00000639034 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
PAX6-249ENST00000639034 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
PAX6-249ENST00000639034 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
PAX6-249ENST00000639034 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
PAX6-249ENST00000639034 AQRO60306 1485 aaKnown RBP eCLIP21.15■□□□□ 0.98
PAX6-249ENST00000639034 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
PAX6-249ENST00000639034 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.97
PAX6-249ENST00000639034 GRIN2BQ13224 1484 aa21.02■□□□□ 0.96
PAX6-249ENST00000639034 OSCARQ8IYS5 282 aa21.02■□□□□ 0.95
PAX6-249ENST00000639034 GAPVD1Q14C86 1478 aa21.01■□□□□ 0.95
PAX6-249ENST00000639034 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
PAX6-249ENST00000639034 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
PAX6-249ENST00000639034 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
PAX6-249ENST00000639034 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
PAX6-249ENST00000639034 CHD1O14646 1710 aa20.97■□□□□ 0.95
PAX6-249ENST00000639034 FBLN2P98095 1184 aa20.92■□□□□ 0.94
PAX6-249ENST00000639034 SYNJ2O15056 1496 aa20.89■□□□□ 0.93
PAX6-249ENST00000639034 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
PAX6-249ENST00000639034 ERICH3Q5RHP9 1530 aa20.85■□□□□ 0.93
PAX6-249ENST00000639034 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
PAX6-249ENST00000639034 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
PAX6-249ENST00000639034 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.91
PAX6-249ENST00000639034 GRIN2AQ12879 1464 aa20.75■□□□□ 0.91
PAX6-249ENST00000639034 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
PAX6-249ENST00000639034 RIMBP3CA6NJZ7 1639 aa20.7■□□□□ 0.9
PAX6-249ENST00000639034 RIMBP3BA6NNM3 1639 aa20.7■□□□□ 0.9
PAX6-249ENST00000639034 RIMBP3Q9UFD9 1639 aa20.7■□□□□ 0.9
PAX6-249ENST00000639034 ARHGEF11O15085 1522 aa20.7■□□□□ 0.9
PAX6-249ENST00000639034 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
PAX6-249ENST00000639034 CUL7Q14999 1698 aa20.68■□□□□ 0.9
PAX6-249ENST00000639034 IGF1RP08069 1367 aa20.65■□□□□ 0.9
PAX6-249ENST00000639034 NUP160Q12769 1436 aa20.64■□□□□ 0.9
PAX6-249ENST00000639034 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
PAX6-249ENST00000639034 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
PAX6-249ENST00000639034 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.88
PAX6-249ENST00000639034 ARAP1Q96P48 1450 aa20.52■□□□□ 0.87
PAX6-249ENST00000639034 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
PAX6-249ENST00000639034 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
PAX6-249ENST00000639034 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms