RNA–Protein interactions for RNA: ENST00000638963.1

PAX6-246, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-246ENST00000638963 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
PAX6-246ENST00000638963 CCDC180Q9P1Z9 1646 aa20.02■□□□□ 0.8
PAX6-246ENST00000638963 ABCC9O60706 1549 aa19.35■□□□□ 0.69
PAX6-246ENST00000638963 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
PAX6-246ENST00000638963 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
PAX6-246ENST00000638963 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
PAX6-246ENST00000638963 NACADO15069 1562 aa18.72■□□□□ 0.59
PAX6-246ENST00000638963 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
PAX6-246ENST00000638963 MYO15BQ96JP2 1530 aa18.66■□□□□ 0.58
PAX6-246ENST00000638963 SCRIBQ14160 1630 aa18.4■□□□□ 0.54
PAX6-246ENST00000638963 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
PAX6-246ENST00000638963 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
PAX6-246ENST00000638963 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
PAX6-246ENST00000638963 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
PAX6-246ENST00000638963 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
PAX6-246ENST00000638963 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
PAX6-246ENST00000638963 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
PAX6-246ENST00000638963 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
PAX6-246ENST00000638963 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
PAX6-246ENST00000638963 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
PAX6-246ENST00000638963 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
PAX6-246ENST00000638963 RSF1Q96T23 1441 aaPredicted RBP17.46■□□□□ 0.38
PAX6-246ENST00000638963 WIZO95785 1651 aa17.42■□□□□ 0.38
PAX6-246ENST00000638963 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
PAX6-246ENST00000638963 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
PAX6-246ENST00000638963 SMARCA2P51531 1590 aa17.33■□□□□ 0.37
PAX6-246ENST00000638963 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.37
PAX6-246ENST00000638963 NCAPD3P42695 1498 aa17.27■□□□□ 0.36
PAX6-246ENST00000638963 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
PAX6-246ENST00000638963 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
PAX6-246ENST00000638963 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
PAX6-246ENST00000638963 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
PAX6-246ENST00000638963 NESP48681 1621 aa16.87■□□□□ 0.29
PAX6-246ENST00000638963 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
PAX6-246ENST00000638963 CFTRP13569 1480 aa16.78■□□□□ 0.28
PAX6-246ENST00000638963 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
PAX6-246ENST00000638963 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
PAX6-246ENST00000638963 KIF21AQ7Z4S6 1674 aa16.67■□□□□ 0.26
PAX6-246ENST00000638963 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
PAX6-246ENST00000638963 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
PAX6-246ENST00000638963 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
PAX6-246ENST00000638963 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
PAX6-246ENST00000638963 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
PAX6-246ENST00000638963 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
PAX6-246ENST00000638963 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
PAX6-246ENST00000638963 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
PAX6-246ENST00000638963 CUX1P39880 1505 aa16.45■□□□□ 0.22
PAX6-246ENST00000638963 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
PAX6-246ENST00000638963 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
PAX6-246ENST00000638963 TOPBP1Q92547 1522 aa16.42■□□□□ 0.22
PAX6-246ENST00000638963 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
PAX6-246ENST00000638963 WDR62O43379 1518 aa16.41■□□□□ 0.22
PAX6-246ENST00000638963 BIVM-ERCC5R4GMW8 1640 aa16.37■□□□□ 0.21
PAX6-246ENST00000638963 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
PAX6-246ENST00000638963 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
PAX6-246ENST00000638963 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.21
PAX6-246ENST00000638963 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
PAX6-246ENST00000638963 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
PAX6-246ENST00000638963 CUX2O14529 1486 aa16.28■□□□□ 0.2
PAX6-246ENST00000638963 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.2
PAX6-246ENST00000638963 SOGA1O94964 1423 aa16.22■□□□□ 0.19
PAX6-246ENST00000638963 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
PAX6-246ENST00000638963 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
PAX6-246ENST00000638963 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
PAX6-246ENST00000638963 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
PAX6-246ENST00000638963 ABCA10Q8WWZ4 1543 aa16.14■□□□□ 0.17
PAX6-246ENST00000638963 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
PAX6-246ENST00000638963 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
PAX6-246ENST00000638963 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
PAX6-246ENST00000638963 EIF4G3O43432 1585 aaKnown RBP16.11■□□□□ 0.17
PAX6-246ENST00000638963 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
PAX6-246ENST00000638963 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
PAX6-246ENST00000638963 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
PAX6-246ENST00000638963 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
PAX6-246ENST00000638963 KIF27Q86VH2 1401 aa16.04■□□□□ 0.16
PAX6-246ENST00000638963 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
PAX6-246ENST00000638963 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.15
PAX6-246ENST00000638963 IGF1RP08069 1367 aa15.95■□□□□ 0.14
PAX6-246ENST00000638963 ERICH3Q5RHP9 1530 aa15.95■□□□□ 0.14
PAX6-246ENST00000638963 EEA1Q15075 1411 aa15.92■□□□□ 0.14
PAX6-246ENST00000638963 ADAMTS12P58397 1594 aa15.91■□□□□ 0.14
PAX6-246ENST00000638963 CSRNP3Q8WYN3 585 aa15.9■□□□□ 0.14
PAX6-246ENST00000638963 CUL7Q14999 1698 aa15.89■□□□□ 0.13
PAX6-246ENST00000638963 MAGI1Q96QZ7 1491 aaPredicted RBP15.88■□□□□ 0.13
PAX6-246ENST00000638963 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
PAX6-246ENST00000638963 CHD1O14646 1710 aa15.87■□□□□ 0.13
PAX6-246ENST00000638963 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
PAX6-246ENST00000638963 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
PAX6-246ENST00000638963 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
PAX6-246ENST00000638963 FBLN2P98095 1184 aa15.84■□□□□ 0.13
PAX6-246ENST00000638963 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
PAX6-246ENST00000638963 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
PAX6-246ENST00000638963 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
PAX6-246ENST00000638963 KIF21BO75037 1637 aa15.8■□□□□ 0.12
PAX6-246ENST00000638963 GRIN2AQ12879 1464 aa15.79■□□□□ 0.12
PAX6-246ENST00000638963 AEBP2Q6ZN18 517 aaPredicted RBP15.77■□□□□ 0.11
PAX6-246ENST00000638963 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
PAX6-246ENST00000638963 LOC105371045A0A1W2PR82 267 aa15.74■□□□□ 0.11
PAX6-246ENST00000638963 GOLGA3Q08378 1498 aa15.73■□□□□ 0.11
PAX6-246ENST00000638963 NUP160Q12769 1436 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms