RNA–Protein interactions for RNA: ENST00000638790.1

MED17-216, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-216ENST00000638790 NISCHQ9Y2I1 1504 aa53.34■■■■■ 6.13
MED17-216ENST00000638790 CCDC180Q9P1Z9 1646 aa46.6■■■■■ 5.05
MED17-216ENST00000638790 ZCCHC6Q5VYS8 1495 aaKnown RBP44.77■■■■■ 4.76
MED17-216ENST00000638790 ABCC9O60706 1549 aa44.23■■■■■ 4.67
MED17-216ENST00000638790 DCAF1Q9Y4B6 1507 aa44.17■■■■■ 4.66
MED17-216ENST00000638790 DCAF8L2P0C7V8 631 aa43.96■■■■■ 4.63
MED17-216ENST00000638790 MYO15BQ96JP2 1530 aa43.76■■■■■ 4.6
MED17-216ENST00000638790 NACADO15069 1562 aa43.48■■■■■ 4.55
MED17-216ENST00000638790 SHROOM4Q9ULL8 1493 aa43.19■■■■■ 4.5
MED17-216ENST00000638790 RB1CC1Q8TDY2 1594 aa43.13■■■■■ 4.49
MED17-216ENST00000638790 SCRIBQ14160 1630 aa42.75■■■■■ 4.43
MED17-216ENST00000638790 UNC13AQ9UPW8 1703 aa42.23■■■■■ 4.35
MED17-216ENST00000638790 BICRAQ9NZM4 1560 aa41.89■■■■■ 4.3
MED17-216ENST00000638790 PABPN1Q86U42 306 aaKnown RBP eCLIP41.66■■■■■ 4.26
MED17-216ENST00000638790 CECR2Q9BXF3 1484 aa41.46■■■■■ 4.23
MED17-216ENST00000638790 SUPT5HO00267 1087 aaKnown RBP41.43■■■■■ 4.22
MED17-216ENST00000638790 RSF1Q96T23 1441 aaPredicted RBP41.29■■■■■ 4.2
MED17-216ENST00000638790 MROH2BQ7Z745 1585 aa41.19■■■■■ 4.18
MED17-216ENST00000638790 BAZ1AQ9NRL2 1556 aaPredicted RBP41.18■■■■■ 4.18
MED17-216ENST00000638790 SMARCA4P51532 1647 aa41.02■■■■■ 4.16
MED17-216ENST00000638790 WIZO95785 1651 aa40.79■■■■■ 4.12
MED17-216ENST00000638790 EIF4G1Q04637 1599 aaKnown RBP40.61■■■■■ 4.09
MED17-216ENST00000638790 PEG3Q9GZU2 1588 aa40.61■■■■■ 4.09
MED17-216ENST00000638790 ATAD2BQ9ULI0 1458 aa40.45■■■■■ 4.07
MED17-216ENST00000638790 TOP2AP11388 1531 aaKnown RBP40.4■■■■■ 4.06
MED17-216ENST00000638790 SMARCA2P51531 1590 aa40.38■■■■■ 4.06
MED17-216ENST00000638790 NCAPD3P42695 1498 aa40.18■■■■■ 4.02
MED17-216ENST00000638790 BAZ1BQ9UIG0 1483 aaKnown RBP40.15■■■■■ 4.02
MED17-216ENST00000638790 HMGXB3Q12766 1538 aa40.07■■■■■ 4.01
MED17-216ENST00000638790 CC2D2AQ9P2K1 1620 aa40.05■■■■■ 4
MED17-216ENST00000638790 CCDC88BA6NC98 1476 aa39.99■■■■□ 3.99
MED17-216ENST00000638790 CHIC1Q5VXU3 224 aa39.64■■■■□ 3.94
MED17-216ENST00000638790 DNAJC5BQ9UF47 199 aa39.3■■■■□ 3.88
MED17-216ENST00000638790 CFTRP13569 1480 aa39.2■■■■□ 3.87
MED17-216ENST00000638790 CADPSQ9ULU8 1353 aa39.09■■■■□ 3.85
MED17-216ENST00000638790 TRIM41Q8WV44 630 aa39.02■■■■□ 3.84
MED17-216ENST00000638790 ABCC8Q09428 1581 aa39.01■■■■□ 3.84
MED17-216ENST00000638790 PRDM2Q13029 1718 aa38.89■■■■□ 3.82
MED17-216ENST00000638790 WRNQ14191 1432 aaPredicted RBP eCLIP38.83■■■■□ 3.81
MED17-216ENST00000638790 LAMC3Q9Y6N6 1575 aa38.79■■■■□ 3.8
MED17-216ENST00000638790 NESP48681 1621 aa38.78■■■■□ 3.8
MED17-216ENST00000638790 SYNJ1O43426 1573 aa38.68■■■■□ 3.78
MED17-216ENST00000638790 FANCD2Q9BXW9 1451 aa38.62■■■■□ 3.77
MED17-216ENST00000638790 TOP2BQ02880 1626 aa38.56■■■■□ 3.76
MED17-216ENST00000638790 BIVM-ERCC5R4GMW8 1640 aa38.52■■■■□ 3.76
MED17-216ENST00000638790 CUX1P39880 1505 aa38.52■■■■□ 3.76
MED17-216ENST00000638790 PDS5BQ9NTI5 1447 aa38.49■■■■□ 3.75
MED17-216ENST00000638790 CEP164Q9UPV0 1460 aa38.38■■■■□ 3.74
MED17-216ENST00000638790 KIF21AQ7Z4S6 1674 aa38.28■■■■□ 3.72
MED17-216ENST00000638790 SOGA1O94964 1423 aa38.28■■■■□ 3.72
MED17-216ENST00000638790 DNMBPQ6XZF7 1577 aa38.24■■■■□ 3.71
MED17-216ENST00000638790 FAM9AQ8IZU1 332 aaPredicted RBP38.23■■■■□ 3.71
MED17-216ENST00000638790 TOPBP1Q92547 1522 aa38.19■■■■□ 3.7
MED17-216ENST00000638790 URB2Q14146 1524 aaKnown RBP38.18■■■■□ 3.7
MED17-216ENST00000638790 EEA1Q15075 1411 aa38.17■■■■□ 3.7
MED17-216ENST00000638790 RUSC2Q8N2Y8 1516 aa38.14■■■■□ 3.7
MED17-216ENST00000638790 FGD5Q6ZNL6 1462 aa38.11■■■■□ 3.69
MED17-216ENST00000638790 LOC105371045A0A1W2PR82 267 aa38.07■■■■□ 3.68
MED17-216ENST00000638790 MRC2Q9UBG0 1479 aa38.01■■■■□ 3.67
MED17-216ENST00000638790 POLA1P09884 1462 aaPredicted RBP38■■■■□ 3.67
MED17-216ENST00000638790 CSRNP3Q8WYN3 585 aa37.96■■■■□ 3.67
MED17-216ENST00000638790 ERCC6Q03468 1493 aa37.91■■■■□ 3.66
MED17-216ENST00000638790 KIF27Q86VH2 1401 aa37.86■■■■□ 3.65
MED17-216ENST00000638790 RAD54L2Q9Y4B4 1467 aa37.84■■■■□ 3.65
MED17-216ENST00000638790 WDR62O43379 1518 aa37.84■■■■□ 3.65
MED17-216ENST00000638790 ABCA10Q8WWZ4 1543 aa37.82■■■■□ 3.64
MED17-216ENST00000638790 CUX2O14529 1486 aa37.8■■■■□ 3.64
MED17-216ENST00000638790 THOC2Q8NI27 1593 aaKnown RBP37.77■■■■□ 3.64
MED17-216ENST00000638790 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
MED17-216ENST00000638790 KIF21BO75037 1637 aa37.67■■■■□ 3.62
MED17-216ENST00000638790 TARBP1Q13395 1621 aaKnown RBP37.66■■■■□ 3.62
MED17-216ENST00000638790 EHMT2Q96KQ7 1210 aa37.63■■■■□ 3.61
MED17-216ENST00000638790 PRXQ9BXM0 1461 aa37.61■■■■□ 3.61
MED17-216ENST00000638790 IGF1RP08069 1367 aa37.61■■■■□ 3.61
MED17-216ENST00000638790 GOLGA3Q08378 1498 aa37.59■■■■□ 3.61
MED17-216ENST00000638790 IFT140Q96RY7 1462 aa37.52■■■■□ 3.6
MED17-216ENST00000638790 ABCA5Q8WWZ7 1642 aa37.51■■■■□ 3.6
MED17-216ENST00000638790 RAPGEF2Q9Y4G8 1499 aa37.5■■■■□ 3.59
MED17-216ENST00000638790 TDRD9Q8NDG6 1382 aaKnown RBP37.49■■■■□ 3.59
MED17-216ENST00000638790 ERICH3Q5RHP9 1530 aa37.48■■■■□ 3.59
MED17-216ENST00000638790 TNIKQ9UKE5 1360 aa37.47■■■■□ 3.59
MED17-216ENST00000638790 GAPVD1Q14C86 1478 aa37.43■■■■□ 3.58
MED17-216ENST00000638790 CARMIL1Q5VZK9 1371 aa37.38■■■■□ 3.57
MED17-216ENST00000638790 UBTFP17480 764 aaKnown RBP37.37■■■■□ 3.57
MED17-216ENST00000638790 ZNF608Q9ULD9 1512 aaPredicted RBP37.31■■■■□ 3.56
MED17-216ENST00000638790 AQRO60306 1485 aaKnown RBP eCLIP37.3■■■■□ 3.564e-7■■■□□ 16.8
MED17-216ENST00000638790 CUL7Q14999 1698 aa37.28■■■■□ 3.56
MED17-216ENST00000638790 CEP162Q5TB80 1403 aa37.2■■■■□ 3.55
MED17-216ENST00000638790 PBRM1Q86U86 1689 aa37.19■■■■□ 3.54
MED17-216ENST00000638790 GRIN2BQ13224 1484 aa37.18■■■■□ 3.54
MED17-216ENST00000638790 EIF4G3O43432 1585 aaKnown RBP37.15■■■■□ 3.54
MED17-216ENST00000638790 FHAD1B1AJZ9 1412 aa37.04■■■■□ 3.52
MED17-216ENST00000638790 ADAMTS12P58397 1594 aa37.02■■■■□ 3.52
MED17-216ENST00000638790 CLIP1P30622 1438 aa36.97■■■■□ 3.51
MED17-216ENST00000638790 SNAPC4Q5SXM2 1469 aa36.94■■■■□ 3.5
MED17-216ENST00000638790 MAGI1Q96QZ7 1491 aaPredicted RBP36.91■■■■□ 3.5
MED17-216ENST00000638790 CTTNBP2Q8WZ74 1663 aa36.79■■■■□ 3.48
MED17-216ENST00000638790 SYNJ2O15056 1496 aa36.76■■■■□ 3.48
MED17-216ENST00000638790 RANGAP1P46060 587 aaPredicted RBP36.75■■■■□ 3.47
MED17-216ENST00000638790 GRIN2AQ12879 1464 aa36.73■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms