RNA–Protein interactions for RNA: ENST00000638627.1

NSD1-216, Transcript of nuclear receptor binding SET domain protein 1, humanhuman

TSL 5 BASIC

Gene NSD1, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD1-216ENST00000638627 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
NSD1-216ENST00000638627 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
NSD1-216ENST00000638627 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
NSD1-216ENST00000638627 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
NSD1-216ENST00000638627 ABCC9O60706 1549 aa16.53■□□□□ 0.24
NSD1-216ENST00000638627 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
NSD1-216ENST00000638627 DCAF1Q9Y4B6 1507 aa16.34■□□□□ 0.21
NSD1-216ENST00000638627 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
NSD1-216ENST00000638627 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
NSD1-216ENST00000638627 NACADO15069 1562 aa16.19■□□□□ 0.18
NSD1-216ENST00000638627 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
NSD1-216ENST00000638627 SHROOM4Q9ULL8 1493 aa15.89■□□□□ 0.13
NSD1-216ENST00000638627 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
NSD1-216ENST00000638627 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
NSD1-216ENST00000638627 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
NSD1-216ENST00000638627 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
NSD1-216ENST00000638627 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
NSD1-216ENST00000638627 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.04
NSD1-216ENST00000638627 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
NSD1-216ENST00000638627 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
NSD1-216ENST00000638627 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
NSD1-216ENST00000638627 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
NSD1-216ENST00000638627 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
NSD1-216ENST00000638627 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
NSD1-216ENST00000638627 WIZO95785 1651 aa15.11■□□□□ 0.01
NSD1-216ENST00000638627 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
NSD1-216ENST00000638627 SMARCA2P51531 1590 aa15.02□□□□□ -0.01
NSD1-216ENST00000638627 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
NSD1-216ENST00000638627 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
NSD1-216ENST00000638627 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
NSD1-216ENST00000638627 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
NSD1-216ENST00000638627 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
NSD1-216ENST00000638627 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
NSD1-216ENST00000638627 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
NSD1-216ENST00000638627 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
NSD1-216ENST00000638627 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.05
NSD1-216ENST00000638627 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
NSD1-216ENST00000638627 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
NSD1-216ENST00000638627 CFTRP13569 1480 aa14.52□□□□□ -0.08
NSD1-216ENST00000638627 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
NSD1-216ENST00000638627 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
NSD1-216ENST00000638627 NESP48681 1621 aa14.44□□□□□ -0.1
NSD1-216ENST00000638627 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
NSD1-216ENST00000638627 FANCD2Q9BXW9 1451 aa14.35□□□□□ -0.11
NSD1-216ENST00000638627 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.11
NSD1-216ENST00000638627 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
NSD1-216ENST00000638627 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
NSD1-216ENST00000638627 FOXD1Q16676 465 aa14.31□□□□□ -0.12
NSD1-216ENST00000638627 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
NSD1-216ENST00000638627 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
NSD1-216ENST00000638627 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
NSD1-216ENST00000638627 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
NSD1-216ENST00000638627 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
NSD1-216ENST00000638627 CUX1P39880 1505 aa14.26□□□□□ -0.13
NSD1-216ENST00000638627 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
NSD1-216ENST00000638627 ERCC6Q03468 1493 aa14.2□□□□□ -0.14
NSD1-216ENST00000638627 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
NSD1-216ENST00000638627 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
NSD1-216ENST00000638627 MRC2Q9UBG0 1479 aa14.17□□□□□ -0.14
NSD1-216ENST00000638627 FGD5Q6ZNL6 1462 aa14.14□□□□□ -0.15
NSD1-216ENST00000638627 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
NSD1-216ENST00000638627 WDR62O43379 1518 aa14.12□□□□□ -0.15
NSD1-216ENST00000638627 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
NSD1-216ENST00000638627 SOGA1O94964 1423 aa14.06□□□□□ -0.16
NSD1-216ENST00000638627 WDR97A6NE52 1622 aa14.03□□□□□ -0.16
NSD1-216ENST00000638627 RAD54L2Q9Y4B4 1467 aa14.02□□□□□ -0.16
NSD1-216ENST00000638627 EEA1Q15075 1411 aa14.02□□□□□ -0.16
NSD1-216ENST00000638627 RUSC2Q8N2Y8 1516 aa14.02□□□□□ -0.17
NSD1-216ENST00000638627 FAM9AQ8IZU1 332 aaPredicted RBP14.01□□□□□ -0.17
NSD1-216ENST00000638627 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
NSD1-216ENST00000638627 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
NSD1-216ENST00000638627 CUX2O14529 1486 aa14□□□□□ -0.17
NSD1-216ENST00000638627 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
NSD1-216ENST00000638627 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
NSD1-216ENST00000638627 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
NSD1-216ENST00000638627 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
NSD1-216ENST00000638627 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
NSD1-216ENST00000638627 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
NSD1-216ENST00000638627 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
NSD1-216ENST00000638627 KIF21BO75037 1637 aa13.88□□□□□ -0.19
NSD1-216ENST00000638627 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
NSD1-216ENST00000638627 EIF4G3O43432 1585 aaKnown RBP13.87□□□□□ -0.19
NSD1-216ENST00000638627 IGF1RP08069 1367 aa13.86□□□□□ -0.19
NSD1-216ENST00000638627 ERICH3Q5RHP9 1530 aa13.85□□□□□ -0.19
NSD1-216ENST00000638627 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.196e-6■■■□□ 18.7
NSD1-216ENST00000638627 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
NSD1-216ENST00000638627 CUL7Q14999 1698 aa13.84□□□□□ -0.19
NSD1-216ENST00000638627 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
NSD1-216ENST00000638627 GOLGA3Q08378 1498 aa13.82□□□□□ -0.2
NSD1-216ENST00000638627 GRIN2BQ13224 1484 aa13.81□□□□□ -0.2
NSD1-216ENST00000638627 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
NSD1-216ENST00000638627 CARMIL1Q5VZK9 1371 aa13.8□□□□□ -0.2
NSD1-216ENST00000638627 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
NSD1-216ENST00000638627 ADAMTS12P58397 1594 aa13.77□□□□□ -0.21
NSD1-216ENST00000638627 MSH5O43196 834 aa13.76□□□□□ -0.21
NSD1-216ENST00000638627 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
NSD1-216ENST00000638627 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
NSD1-216ENST00000638627 MAGI1Q96QZ7 1491 aaPredicted RBP13.73□□□□□ -0.21
NSD1-216ENST00000638627 UBTFP17480 764 aaKnown RBP13.72□□□□□ -0.21
NSD1-216ENST00000638627 TNIKQ9UKE5 1360 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms