RNA–Protein interactions for RNA: ENST00000638463.1

EGFR-211, Transcript of epidermal growth factor receptor, humanhuman

TSL 5 BASIC

Gene EGFR, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-211ENST00000638463 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
EGFR-211ENST00000638463 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
EGFR-211ENST00000638463 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
EGFR-211ENST00000638463 SUPT5HO00267 1087 aaKnown RBP17.81■□□□□ 0.44
EGFR-211ENST00000638463 MYT1Q01538 1121 aa17.78■□□□□ 0.44
EGFR-211ENST00000638463 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
EGFR-211ENST00000638463 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
EGFR-211ENST00000638463 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
EGFR-211ENST00000638463 EHMT2Q96KQ7 1210 aa17.3■□□□□ 0.36
EGFR-211ENST00000638463 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
EGFR-211ENST00000638463 ZEB1P37275 1124 aaPredicted RBP17.15■□□□□ 0.34
EGFR-211ENST00000638463 CCER1Q8TC90 406 aaPredicted RBP17.09■□□□□ 0.33
EGFR-211ENST00000638463 HRCP23327 699 aa16.94■□□□□ 0.3
EGFR-211ENST00000638463 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
EGFR-211ENST00000638463 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
EGFR-211ENST00000638463 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
EGFR-211ENST00000638463 APLP2Q06481 763 aa16.82■□□□□ 0.28
EGFR-211ENST00000638463 NEFLP07196 543 aa16.78■□□□□ 0.28
EGFR-211ENST00000638463 PPARGC1BQ86YN6 1023 aaKnown RBP16.63■□□□□ 0.25
EGFR-211ENST00000638463 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
EGFR-211ENST00000638463 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
EGFR-211ENST00000638463 GTF3C3Q9Y5Q9 886 aa16.34■□□□□ 0.21
EGFR-211ENST00000638463 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
EGFR-211ENST00000638463 DAXXQ9UER7 740 aaPredicted RBP16.25■□□□□ 0.19
EGFR-211ENST00000638463 RANGAP1P46060 587 aaPredicted RBP16.25■□□□□ 0.19
EGFR-211ENST00000638463 DIEXFQ68CQ4 756 aaKnown RBP16.25■□□□□ 0.19
EGFR-211ENST00000638463 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
EGFR-211ENST00000638463 LOC105371045A0A1W2PR82 267 aa16.18■□□□□ 0.18
EGFR-211ENST00000638463 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
EGFR-211ENST00000638463 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
EGFR-211ENST00000638463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
EGFR-211ENST00000638463 BCANQ96GW7 911 aa16.02■□□□□ 0.16
EGFR-211ENST00000638463 ATP1B4Q9UN42 357 aaPredicted RBP15.96■□□□□ 0.15
EGFR-211ENST00000638463 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
EGFR-211ENST00000638463 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
EGFR-211ENST00000638463 EIF5BO60841 1220 aaKnown RBP15.85■□□□□ 0.13
EGFR-211ENST00000638463 CDK11AQ9UQ88 783 aaPredicted RBP15.83■□□□□ 0.13
EGFR-211ENST00000638463 ITGAEP38570 1179 aa15.8■□□□□ 0.12
EGFR-211ENST00000638463 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
EGFR-211ENST00000638463 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
EGFR-211ENST00000638463 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
EGFR-211ENST00000638463 CLSPNQ9HAW4 1339 aa15.72■□□□□ 0.11
EGFR-211ENST00000638463 NEUROD1Q13562 356 aa15.7■□□□□ 0.1
EGFR-211ENST00000638463 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
EGFR-211ENST00000638463 GLIPR1L2Q4G1C9 344 aa15.6■□□□□ 0.09
EGFR-211ENST00000638463 ANP32AP39687 249 aaKnown RBP15.58■□□□□ 0.08
EGFR-211ENST00000638463 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.08
EGFR-211ENST00000638463 SLC24A1O60721 1099 aa15.58■□□□□ 0.08
EGFR-211ENST00000638463 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
EGFR-211ENST00000638463 ANP32CO43423 234 aa15.52■□□□□ 0.08
EGFR-211ENST00000638463 FKBP8Q14318 412 aa15.52■□□□□ 0.08
EGFR-211ENST00000638463 ANP32EQ9BTT0 268 aa15.46■□□□□ 0.07
EGFR-211ENST00000638463 NPM2Q86SE8 214 aaKnown RBP15.46■□□□□ 0.06
EGFR-211ENST00000638463 NBR1Q14596 966 aa15.45■□□□□ 0.06
EGFR-211ENST00000638463 ABCC9O60706 1549 aa15.41■□□□□ 0.06
EGFR-211ENST00000638463 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
EGFR-211ENST00000638463 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
EGFR-211ENST00000638463 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
EGFR-211ENST00000638463 ZBTB47Q9UFB7 747 aaPredicted RBP15.3■□□□□ 0.04
EGFR-211ENST00000638463 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
EGFR-211ENST00000638463 FAM50AQ14320 339 aaKnown RBP15.23■□□□□ 0.03
EGFR-211ENST00000638463 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
EGFR-211ENST00000638463 MIER1Q8N108 512 aa15.21■□□□□ 0.03
EGFR-211ENST00000638463 ANP32BQ92688 251 aaKnown RBP15.21■□□□□ 0.03
EGFR-211ENST00000638463 HNRNPUQ00839 825 aaKnown RBP eCLIP15.18■□□□□ 0.02
EGFR-211ENST00000638463 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
EGFR-211ENST00000638463 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
EGFR-211ENST00000638463 ARXQ96QS3 562 aa15.15■□□□□ 0.02
EGFR-211ENST00000638463 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
EGFR-211ENST00000638463 CCDC136Q96JN2 1154 aa15.11■□□□□ 0.01
EGFR-211ENST00000638463 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
EGFR-211ENST00000638463 CANXP27824 592 aaKnown RBP15.1■□□□□ 0.01
EGFR-211ENST00000638463 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
EGFR-211ENST00000638463 IRX6P78412 446 aaPredicted RBP15.08■□□□□ 0
EGFR-211ENST00000638463 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
EGFR-211ENST00000638463 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
EGFR-211ENST00000638463 HSP90AA1P07900 732 aaKnown RBP15.03■□□□□ -0
EGFR-211ENST00000638463 FAM9BQ8IZU0 186 aa15.02■□□□□ -0
EGFR-211ENST00000638463 NEFMP07197 916 aa15.01□□□□□ -0.01
EGFR-211ENST00000638463 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
EGFR-211ENST00000638463 ERICH6BQ5W0A0 696 aa14.98□□□□□ -0.01
EGFR-211ENST00000638463 DEKP35659 375 aaKnown RBP14.95□□□□□ -0.02
EGFR-211ENST00000638463 SUPT16HQ9Y5B9 1047 aaKnown RBP14.95□□□□□ -0.02
EGFR-211ENST00000638463 TNNT2P45379 298 aaPredicted RBP14.91□□□□□ -0.02
EGFR-211ENST00000638463 TRIM44Q96DX7 344 aaPredicted RBP14.91□□□□□ -0.02
EGFR-211ENST00000638463 NAP1L5Q96NT1 182 aaPredicted RBP14.91□□□□□ -0.02
EGFR-211ENST00000638463 SALL2Q9Y467 1007 aaPredicted RBP14.89□□□□□ -0.03
EGFR-211ENST00000638463 NOP58Q9Y2X3 529 aaKnown RBP14.88□□□□□ -0.03
EGFR-211ENST00000638463 PPM1GO15355 546 aaPredicted RBP14.87□□□□□ -0.03
EGFR-211ENST00000638463 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
EGFR-211ENST00000638463 LAS1LQ9Y4W2 734 aaKnown RBP14.85□□□□□ -0.03
EGFR-211ENST00000638463 RBM19Q9Y4C8 960 aaKnown RBP14.84□□□□□ -0.03
EGFR-211ENST00000638463 MRS2Q9HD23 443 aa14.83□□□□□ -0.03
EGFR-211ENST00000638463 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.82□□□□□ -0.04
EGFR-211ENST00000638463 TONSLQ96HA7 1378 aa14.81□□□□□ -0.04
EGFR-211ENST00000638463 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
EGFR-211ENST00000638463 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.78□□□□□ -0.04
EGFR-211ENST00000638463 TMC1Q8TDI8 760 aa14.78□□□□□ -0.04
EGFR-211ENST00000638463 RB1CC1Q8TDY2 1594 aa14.76□□□□□ -0.05
EGFR-211ENST00000638463 CEP162Q5TB80 1403 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms