RNA–Protein interactions for RNA: ENST00000638416.1

FAM238C-201, Transcript of family with sequence similarity 238 member C, humanhuman

TSL 2 BASIC

Gene FAM238C, Length 868 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-201ENST00000638416 NISCHQ9Y2I1 1504 aa27.96■■■□□ 2.07
FAM238C-201ENST00000638416 AEBP2Q6ZN18 517 aaPredicted RBP25.29■■□□□ 1.64
FAM238C-201ENST00000638416 ABCC9O60706 1549 aa25.15■■□□□ 1.62
FAM238C-201ENST00000638416 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
FAM238C-201ENST00000638416 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
FAM238C-201ENST00000638416 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
FAM238C-201ENST00000638416 DCAF8L2P0C7V8 631 aa23.81■■□□□ 1.4
FAM238C-201ENST00000638416 NACADO15069 1562 aa23.72■■□□□ 1.39
FAM238C-201ENST00000638416 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
FAM238C-201ENST00000638416 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
FAM238C-201ENST00000638416 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
FAM238C-201ENST00000638416 UNC13AQ9UPW8 1703 aa23.24■■□□□ 1.31
FAM238C-201ENST00000638416 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
FAM238C-201ENST00000638416 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
FAM238C-201ENST00000638416 DCAF1Q9Y4B6 1507 aa23.06■■□□□ 1.28
FAM238C-201ENST00000638416 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
FAM238C-201ENST00000638416 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
FAM238C-201ENST00000638416 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
FAM238C-201ENST00000638416 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
FAM238C-201ENST00000638416 EIF4G1Q04637 1599 aaKnown RBP22.61■■□□□ 1.21
FAM238C-201ENST00000638416 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
FAM238C-201ENST00000638416 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
FAM238C-201ENST00000638416 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
FAM238C-201ENST00000638416 SMARCA2P51531 1590 aa21.78■■□□□ 1.08
FAM238C-201ENST00000638416 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
FAM238C-201ENST00000638416 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
FAM238C-201ENST00000638416 HMGXB3Q12766 1538 aa21.7■■□□□ 1.07
FAM238C-201ENST00000638416 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
FAM238C-201ENST00000638416 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
FAM238C-201ENST00000638416 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
FAM238C-201ENST00000638416 CUX2O14529 1486 aa21.64■■□□□ 1.05
FAM238C-201ENST00000638416 NESP48681 1621 aa21.57■■□□□ 1.04
FAM238C-201ENST00000638416 MROH2BQ7Z745 1585 aa21.54■■□□□ 1.04
FAM238C-201ENST00000638416 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
FAM238C-201ENST00000638416 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
FAM238C-201ENST00000638416 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
FAM238C-201ENST00000638416 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
FAM238C-201ENST00000638416 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
FAM238C-201ENST00000638416 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
FAM238C-201ENST00000638416 WIZO95785 1651 aa21.28■■□□□ 1
FAM238C-201ENST00000638416 KIF21AQ7Z4S6 1674 aa21.23■□□□□ 0.99
FAM238C-201ENST00000638416 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
FAM238C-201ENST00000638416 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
FAM238C-201ENST00000638416 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
FAM238C-201ENST00000638416 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
FAM238C-201ENST00000638416 WDR62O43379 1518 aa21.03■□□□□ 0.96
FAM238C-201ENST00000638416 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
FAM238C-201ENST00000638416 CFTRP13569 1480 aa21■□□□□ 0.95
FAM238C-201ENST00000638416 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
FAM238C-201ENST00000638416 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
FAM238C-201ENST00000638416 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
FAM238C-201ENST00000638416 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
FAM238C-201ENST00000638416 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
FAM238C-201ENST00000638416 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
FAM238C-201ENST00000638416 TOPBP1Q92547 1522 aa20.61■□□□□ 0.89
FAM238C-201ENST00000638416 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
FAM238C-201ENST00000638416 ZNF608Q9ULD9 1512 aaPredicted RBP20.58■□□□□ 0.88
FAM238C-201ENST00000638416 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
FAM238C-201ENST00000638416 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.86
FAM238C-201ENST00000638416 EIF4G3O43432 1585 aaKnown RBP20.43■□□□□ 0.86
FAM238C-201ENST00000638416 FBLN2P98095 1184 aa20.4■□□□□ 0.86
FAM238C-201ENST00000638416 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
FAM238C-201ENST00000638416 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
FAM238C-201ENST00000638416 SOGA1O94964 1423 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RIMBP3CA6NJZ7 1639 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RIMBP3BA6NNM3 1639 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RIMBP3Q9UFD9 1639 aa20.36■□□□□ 0.85
FAM238C-201ENST00000638416 RAD54L2Q9Y4B4 1467 aa20.35■□□□□ 0.85
FAM238C-201ENST00000638416 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
FAM238C-201ENST00000638416 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
FAM238C-201ENST00000638416 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
FAM238C-201ENST00000638416 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
FAM238C-201ENST00000638416 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
FAM238C-201ENST00000638416 CHD1O14646 1710 aa20.26■□□□□ 0.83
FAM238C-201ENST00000638416 CUX1P39880 1505 aa20.23■□□□□ 0.83
FAM238C-201ENST00000638416 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
FAM238C-201ENST00000638416 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
FAM238C-201ENST00000638416 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
FAM238C-201ENST00000638416 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
FAM238C-201ENST00000638416 MAGI1Q96QZ7 1491 aaPredicted RBP20.13■□□□□ 0.81
FAM238C-201ENST00000638416 ARAP1Q96P48 1450 aa20.11■□□□□ 0.81
FAM238C-201ENST00000638416 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
FAM238C-201ENST00000638416 FOXD1Q16676 465 aa20.11■□□□□ 0.81
FAM238C-201ENST00000638416 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
FAM238C-201ENST00000638416 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
FAM238C-201ENST00000638416 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
FAM238C-201ENST00000638416 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
FAM238C-201ENST00000638416 ABCA10Q8WWZ4 1543 aa20.03■□□□□ 0.8
FAM238C-201ENST00000638416 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.791e-323■■■■■ 232.4
FAM238C-201ENST00000638416 PBRM1Q86U86 1689 aa20■□□□□ 0.79
FAM238C-201ENST00000638416 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
FAM238C-201ENST00000638416 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
FAM238C-201ENST00000638416 GRIN2AQ12879 1464 aa19.89■□□□□ 0.77
FAM238C-201ENST00000638416 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
FAM238C-201ENST00000638416 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
FAM238C-201ENST00000638416 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
FAM238C-201ENST00000638416 NUP160Q12769 1436 aa19.79■□□□□ 0.76
FAM238C-201ENST00000638416 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
FAM238C-201ENST00000638416 ERICH3Q5RHP9 1530 aa19.78■□□□□ 0.76
FAM238C-201ENST00000638416 ERCC6L2Q5T890 1561 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms