RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 NISCHQ9Y2I1 1504 aa36.8■■■■□ 3.48
KCNMA1-229ENST00000638249 CCDC180Q9P1Z9 1646 aa32.89■■■□□ 2.86
KCNMA1-229ENST00000638249 ABCC9O60706 1549 aa32.49■■■□□ 2.79
KCNMA1-229ENST00000638249 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
KCNMA1-229ENST00000638249 NACADO15069 1562 aa30.94■■■□□ 2.54
KCNMA1-229ENST00000638249 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
KCNMA1-229ENST00000638249 MYO15BQ96JP2 1530 aa30.64■■■□□ 2.5
KCNMA1-229ENST00000638249 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
KCNMA1-229ENST00000638249 UNC13AQ9UPW8 1703 aa30.51■■■□□ 2.48
KCNMA1-229ENST00000638249 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
KCNMA1-229ENST00000638249 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
KCNMA1-229ENST00000638249 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
KCNMA1-229ENST00000638249 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
KCNMA1-229ENST00000638249 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
KCNMA1-229ENST00000638249 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
KCNMA1-229ENST00000638249 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
KCNMA1-229ENST00000638249 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
KCNMA1-229ENST00000638249 CECR2Q9BXF3 1484 aa29.2■■■□□ 2.27
KCNMA1-229ENST00000638249 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
KCNMA1-229ENST00000638249 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
KCNMA1-229ENST00000638249 ATAD2BQ9ULI0 1458 aa28.55■■■□□ 2.16
KCNMA1-229ENST00000638249 BAZ1AQ9NRL2 1556 aaPredicted RBP28.52■■■□□ 2.16
KCNMA1-229ENST00000638249 SMARCA2P51531 1590 aa28.46■■■□□ 2.15
KCNMA1-229ENST00000638249 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
KCNMA1-229ENST00000638249 MROH2BQ7Z745 1585 aa28.4■■■□□ 2.14
KCNMA1-229ENST00000638249 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
KCNMA1-229ENST00000638249 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
KCNMA1-229ENST00000638249 WIZO95785 1651 aa28.1■■■□□ 2.09
KCNMA1-229ENST00000638249 NESP48681 1621 aa28.06■■■□□ 2.08
KCNMA1-229ENST00000638249 ERCC6Q03468 1493 aa27.96■■■□□ 2.07
KCNMA1-229ENST00000638249 RSF1Q96T23 1441 aaPredicted RBP27.9■■■□□ 2.06
KCNMA1-229ENST00000638249 LAMC3Q9Y6N6 1575 aa27.87■■■□□ 2.05
KCNMA1-229ENST00000638249 CUX2O14529 1486 aa27.8■■■□□ 2.04
KCNMA1-229ENST00000638249 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
KCNMA1-229ENST00000638249 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
KCNMA1-229ENST00000638249 TOP2AP11388 1531 aaKnown RBP27.74■■■□□ 2.03
KCNMA1-229ENST00000638249 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
KCNMA1-229ENST00000638249 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
KCNMA1-229ENST00000638249 CFTRP13569 1480 aa27.48■■□□□ 1.99
KCNMA1-229ENST00000638249 MRC2Q9UBG0 1479 aa27.43■■□□□ 1.98
KCNMA1-229ENST00000638249 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
KCNMA1-229ENST00000638249 WDR62O43379 1518 aa27.4■■□□□ 1.98
KCNMA1-229ENST00000638249 CEP164Q9UPV0 1460 aa27.4■■□□□ 1.98
KCNMA1-229ENST00000638249 CCDC88BA6NC98 1476 aa27.39■■□□□ 1.98
KCNMA1-229ENST00000638249 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
KCNMA1-229ENST00000638249 DNAJC5Q9H3Z4 198 aa27.28■■□□□ 1.96
KCNMA1-229ENST00000638249 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
KCNMA1-229ENST00000638249 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
KCNMA1-229ENST00000638249 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
KCNMA1-229ENST00000638249 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
KCNMA1-229ENST00000638249 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
KCNMA1-229ENST00000638249 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
KCNMA1-229ENST00000638249 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
KCNMA1-229ENST00000638249 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
KCNMA1-229ENST00000638249 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
KCNMA1-229ENST00000638249 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
KCNMA1-229ENST00000638249 CUX1P39880 1505 aa26.66■■□□□ 1.86
KCNMA1-229ENST00000638249 RAD54L2Q9Y4B4 1467 aa26.6■■□□□ 1.85
KCNMA1-229ENST00000638249 FGD5Q6ZNL6 1462 aa26.6■■□□□ 1.85
KCNMA1-229ENST00000638249 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.84
KCNMA1-229ENST00000638249 SOGA1O94964 1423 aa26.52■■□□□ 1.84
KCNMA1-229ENST00000638249 WDR97A6NE52 1622 aa26.48■■□□□ 1.83
KCNMA1-229ENST00000638249 OSCARQ8IYS5 282 aa26.48■■□□□ 1.83
KCNMA1-229ENST00000638249 CHD1O14646 1710 aa26.45■■□□□ 1.82
KCNMA1-229ENST00000638249 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
KCNMA1-229ENST00000638249 SYNJ1O43426 1573 aa26.36■■□□□ 1.81
KCNMA1-229ENST00000638249 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
KCNMA1-229ENST00000638249 SNAPC4Q5SXM2 1469 aa26.33■■□□□ 1.81
KCNMA1-229ENST00000638249 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
KCNMA1-229ENST00000638249 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
KCNMA1-229ENST00000638249 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
KCNMA1-229ENST00000638249 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
KCNMA1-229ENST00000638249 RIMBP3CA6NJZ7 1639 aa26.29■■□□□ 1.8
KCNMA1-229ENST00000638249 RIMBP3BA6NNM3 1639 aa26.29■■□□□ 1.8
KCNMA1-229ENST00000638249 RIMBP3Q9UFD9 1639 aa26.29■■□□□ 1.8
KCNMA1-229ENST00000638249 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
KCNMA1-229ENST00000638249 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
KCNMA1-229ENST00000638249 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
KCNMA1-229ENST00000638249 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
KCNMA1-229ENST00000638249 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
KCNMA1-229ENST00000638249 ARHGEF11O15085 1522 aa26.22■■□□□ 1.79
KCNMA1-229ENST00000638249 FBLN2P98095 1184 aa26.2■■□□□ 1.79
KCNMA1-229ENST00000638249 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
KCNMA1-229ENST00000638249 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
KCNMA1-229ENST00000638249 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
KCNMA1-229ENST00000638249 CHMP7Q8WUX9 453 aaPredicted RBP26.06■■□□□ 1.76
KCNMA1-229ENST00000638249 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
KCNMA1-229ENST00000638249 ERICH3Q5RHP9 1530 aa25.96■■□□□ 1.75
KCNMA1-229ENST00000638249 GRIN2AQ12879 1464 aa25.96■■□□□ 1.75
KCNMA1-229ENST00000638249 CEP170Q5SW79 1584 aa25.91■■□□□ 1.74
KCNMA1-229ENST00000638249 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
KCNMA1-229ENST00000638249 CYB5RLQ6IPT4 315 aa25.88■■□□□ 1.73
KCNMA1-229ENST00000638249 NUP160Q12769 1436 aa25.87■■□□□ 1.73
KCNMA1-229ENST00000638249 ERCC6L2Q5T890 1561 aa25.8■■□□□ 1.72
KCNMA1-229ENST00000638249 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
KCNMA1-229ENST00000638249 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
KCNMA1-229ENST00000638249 RUSC2Q8N2Y8 1516 aa25.7■■□□□ 1.7
KCNMA1-229ENST00000638249 CUL7Q14999 1698 aa25.69■■□□□ 1.7
KCNMA1-229ENST00000638249 IGF1RP08069 1367 aa25.68■■□□□ 1.7
KCNMA1-229ENST00000638249 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms