RNA–Protein interactions for RNA: ENST00000638230.1

HNRNPU-212, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-212ENST00000638230 NISCHQ9Y2I1 1504 aa24.2■■□□□ 1.47
HNRNPU-212ENST00000638230 SHROOM4Q9ULL8 1493 aa20.83■□□□□ 0.93
HNRNPU-212ENST00000638230 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
HNRNPU-212ENST00000638230 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
HNRNPU-212ENST00000638230 HRCP23327 699 aa20.6■□□□□ 0.89
HNRNPU-212ENST00000638230 CCDC180Q9P1Z9 1646 aa20.49■□□□□ 0.87
HNRNPU-212ENST00000638230 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
HNRNPU-212ENST00000638230 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
HNRNPU-212ENST00000638230 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
HNRNPU-212ENST00000638230 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
HNRNPU-212ENST00000638230 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
HNRNPU-212ENST00000638230 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
HNRNPU-212ENST00000638230 DCAF8L2P0C7V8 631 aa19.74■□□□□ 0.75
HNRNPU-212ENST00000638230 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
HNRNPU-212ENST00000638230 ZEB1P37275 1124 aaPredicted RBP19.64■□□□□ 0.74
HNRNPU-212ENST00000638230 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
HNRNPU-212ENST00000638230 ABCC9O60706 1549 aa19.59■□□□□ 0.73
HNRNPU-212ENST00000638230 RSF1Q96T23 1441 aaPredicted RBP19.3■□□□□ 0.68
HNRNPU-212ENST00000638230 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
HNRNPU-212ENST00000638230 TRIM41Q8WV44 630 aa19.25■□□□□ 0.67
HNRNPU-212ENST00000638230 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
HNRNPU-212ENST00000638230 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
HNRNPU-212ENST00000638230 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
HNRNPU-212ENST00000638230 ACIN1Q9UKV3 1341 aaKnown RBP18.94■□□□□ 0.62
HNRNPU-212ENST00000638230 MYT1Q01538 1121 aa18.87■□□□□ 0.61
HNRNPU-212ENST00000638230 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
HNRNPU-212ENST00000638230 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
HNRNPU-212ENST00000638230 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
HNRNPU-212ENST00000638230 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
HNRNPU-212ENST00000638230 EHMT2Q96KQ7 1210 aa18.8■□□□□ 0.6
HNRNPU-212ENST00000638230 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
HNRNPU-212ENST00000638230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.78■□□□□ 0.6
HNRNPU-212ENST00000638230 NACADO15069 1562 aa18.77■□□□□ 0.6
HNRNPU-212ENST00000638230 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
HNRNPU-212ENST00000638230 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.59
HNRNPU-212ENST00000638230 WIZO95785 1651 aa18.74■□□□□ 0.59
HNRNPU-212ENST00000638230 DIEXFQ68CQ4 756 aaKnown RBP18.74■□□□□ 0.59
HNRNPU-212ENST00000638230 WRNQ14191 1432 aaPredicted RBP eCLIP18.74■□□□□ 0.59
HNRNPU-212ENST00000638230 GTF3C3Q9Y5Q9 886 aa18.68■□□□□ 0.58
HNRNPU-212ENST00000638230 CEP162Q5TB80 1403 aa18.58■□□□□ 0.56
HNRNPU-212ENST00000638230 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
HNRNPU-212ENST00000638230 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.56
HNRNPU-212ENST00000638230 EEA1Q15075 1411 aa18.51■□□□□ 0.55
HNRNPU-212ENST00000638230 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
HNRNPU-212ENST00000638230 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
HNRNPU-212ENST00000638230 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
HNRNPU-212ENST00000638230 SMARCA2P51531 1590 aa18.41■□□□□ 0.54
HNRNPU-212ENST00000638230 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
HNRNPU-212ENST00000638230 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
HNRNPU-212ENST00000638230 GOLGA3Q08378 1498 aa18.37■□□□□ 0.53
HNRNPU-212ENST00000638230 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
HNRNPU-212ENST00000638230 SOGA1O94964 1423 aa18.36■□□□□ 0.53
HNRNPU-212ENST00000638230 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
HNRNPU-212ENST00000638230 YTHDC1Q96MU7 727 aaKnown RBP18.27■□□□□ 0.52
HNRNPU-212ENST00000638230 UBTFP17480 764 aaKnown RBP18.26■□□□□ 0.51
HNRNPU-212ENST00000638230 KIF21BO75037 1637 aa18.24■□□□□ 0.51
HNRNPU-212ENST00000638230 MIER1Q8N108 512 aa18.22■□□□□ 0.51
HNRNPU-212ENST00000638230 RUSC2Q8N2Y8 1516 aa18.22■□□□□ 0.51
HNRNPU-212ENST00000638230 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
HNRNPU-212ENST00000638230 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
HNRNPU-212ENST00000638230 VPS8Q8N3P4 1428 aa18.15■□□□□ 0.5
HNRNPU-212ENST00000638230 CLIP1P30622 1438 aa18.13■□□□□ 0.49
HNRNPU-212ENST00000638230 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
HNRNPU-212ENST00000638230 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
HNRNPU-212ENST00000638230 UNC13AQ9UPW8 1703 aa18.08■□□□□ 0.49
HNRNPU-212ENST00000638230 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
HNRNPU-212ENST00000638230 APLP2Q06481 763 aa18.04■□□□□ 0.48
HNRNPU-212ENST00000638230 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
HNRNPU-212ENST00000638230 RAPGEF2Q9Y4G8 1499 aa17.93■□□□□ 0.46
HNRNPU-212ENST00000638230 DHX57Q6P158 1386 aaKnown RBP17.92■□□□□ 0.46
HNRNPU-212ENST00000638230 SUPT16HQ9Y5B9 1047 aaKnown RBP17.91■□□□□ 0.46
HNRNPU-212ENST00000638230 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
HNRNPU-212ENST00000638230 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
HNRNPU-212ENST00000638230 CUX2O14529 1486 aa17.81■□□□□ 0.44
HNRNPU-212ENST00000638230 RRBP1Q9P2E9 1410 aaKnown RBP17.8■□□□□ 0.44
HNRNPU-212ENST00000638230 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
HNRNPU-212ENST00000638230 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
HNRNPU-212ENST00000638230 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
HNRNPU-212ENST00000638230 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
HNRNPU-212ENST00000638230 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
HNRNPU-212ENST00000638230 ATAD2BQ9ULI0 1458 aa17.73■□□□□ 0.43
HNRNPU-212ENST00000638230 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
HNRNPU-212ENST00000638230 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
HNRNPU-212ENST00000638230 CCNB3Q8WWL7 1395 aa17.66■□□□□ 0.42
HNRNPU-212ENST00000638230 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
HNRNPU-212ENST00000638230 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
HNRNPU-212ENST00000638230 MAPKBP1O60336 1514 aa17.59■□□□□ 0.41
HNRNPU-212ENST00000638230 KIF27Q86VH2 1401 aa17.56■□□□□ 0.4
HNRNPU-212ENST00000638230 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
HNRNPU-212ENST00000638230 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
HNRNPU-212ENST00000638230 RAB3GAP2Q9H2M9 1393 aa17.54■□□□□ 0.4
HNRNPU-212ENST00000638230 TIAM1Q13009 1591 aa17.5■□□□□ 0.39
HNRNPU-212ENST00000638230 CUX1P39880 1505 aa17.5■□□□□ 0.39
HNRNPU-212ENST00000638230 NEFLP07196 543 aa17.48■□□□□ 0.39
HNRNPU-212ENST00000638230 SETD5Q9C0A6 1442 aa17.48■□□□□ 0.39
HNRNPU-212ENST00000638230 FKBP8Q14318 412 aa17.47■□□□□ 0.39
HNRNPU-212ENST00000638230 KCNH8Q96L42 1107 aa17.46■□□□□ 0.39
HNRNPU-212ENST00000638230 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
HNRNPU-212ENST00000638230 BCANQ96GW7 911 aa17.44■□□□□ 0.38
HNRNPU-212ENST00000638230 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms