RNA–Protein interactions for RNA: ENST00000637856.1

SMARCA2-264, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-264ENST00000637856 NISCHQ9Y2I1 1504 aa13.81□□□□□ -0.2
SMARCA2-264ENST00000637856 CHIC1Q5VXU3 224 aa13.39□□□□□ -0.27
SMARCA2-264ENST00000637856 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-264ENST00000637856 ABCC9O60706 1549 aa12.78□□□□□ -0.36
SMARCA2-264ENST00000637856 CCDC180Q9P1Z9 1646 aa12.44□□□□□ -0.42
SMARCA2-264ENST00000637856 DNAJC5BQ9UF47 199 aa12.22□□□□□ -0.45
SMARCA2-264ENST00000637856 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
SMARCA2-264ENST00000637856 PHF23Q9BUL5 403 aaPredicted RBP11.96□□□□□ -0.49
SMARCA2-264ENST00000637856 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
SMARCA2-264ENST00000637856 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
SMARCA2-264ENST00000637856 NACADO15069 1562 aa11.86□□□□□ -0.51
SMARCA2-264ENST00000637856 UNC13AQ9UPW8 1703 aa11.66□□□□□ -0.54
SMARCA2-264ENST00000637856 BICRAQ9NZM4 1560 aa11.63□□□□□ -0.55
SMARCA2-264ENST00000637856 MYO15BQ96JP2 1530 aa11.58□□□□□ -0.56
SMARCA2-264ENST00000637856 CECR2Q9BXF3 1484 aa11.53□□□□□ -0.56
SMARCA2-264ENST00000637856 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
SMARCA2-264ENST00000637856 SHROOM4Q9ULL8 1493 aa11.44□□□□□ -0.58
SMARCA2-264ENST00000637856 DNAJC5Q9H3Z4 198 aa11.42□□□□□ -0.58
SMARCA2-264ENST00000637856 EIF4G1Q04637 1599 aaKnown RBP11.39□□□□□ -0.59
SMARCA2-264ENST00000637856 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
SMARCA2-264ENST00000637856 ZCCHC6Q5VYS8 1495 aaKnown RBP11.36□□□□□ -0.59
SMARCA2-264ENST00000637856 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
SMARCA2-264ENST00000637856 PLPPR3Q6T4P5 718 aa11.12□□□□□ -0.63
SMARCA2-264ENST00000637856 CUX2O14529 1486 aa11.07□□□□□ -0.64
SMARCA2-264ENST00000637856 ERCC6Q03468 1493 aa11.07□□□□□ -0.64
SMARCA2-264ENST00000637856 NCAPD3P42695 1498 aa10.97□□□□□ -0.65
SMARCA2-264ENST00000637856 SENP3Q9H4L4 574 aaPredicted RBP10.95□□□□□ -0.66
SMARCA2-264ENST00000637856 ATAD2BQ9ULI0 1458 aa10.91□□□□□ -0.66
SMARCA2-264ENST00000637856 NESP48681 1621 aa10.89□□□□□ -0.67
SMARCA2-264ENST00000637856 TRIM41Q8WV44 630 aa10.87□□□□□ -0.67
SMARCA2-264ENST00000637856 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
SMARCA2-264ENST00000637856 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
SMARCA2-264ENST00000637856 SMARCA4P51532 1647 aa10.8□□□□□ -0.68
SMARCA2-264ENST00000637856 BAZ1BQ9UIG0 1483 aaKnown RBP10.8□□□□□ -0.68
SMARCA2-264ENST00000637856 THOC2Q8NI27 1593 aaKnown RBP10.76□□□□□ -0.69
SMARCA2-264ENST00000637856 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
SMARCA2-264ENST00000637856 LAMC3Q9Y6N6 1575 aa10.74□□□□□ -0.69
SMARCA2-264ENST00000637856 BAZ1AQ9NRL2 1556 aaPredicted RBP10.73□□□□□ -0.69
SMARCA2-264ENST00000637856 EHMT2Q96KQ7 1210 aa10.7□□□□□ -0.7
SMARCA2-264ENST00000637856 KIF21AQ7Z4S6 1674 aa10.69□□□□□ -0.7
SMARCA2-264ENST00000637856 PEG3Q9GZU2 1588 aa10.66□□□□□ -0.7
SMARCA2-264ENST00000637856 CADPSQ9ULU8 1353 aa10.65□□□□□ -0.7
SMARCA2-264ENST00000637856 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.71
SMARCA2-264ENST00000637856 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
SMARCA2-264ENST00000637856 OSCARQ8IYS5 282 aa10.63□□□□□ -0.71
SMARCA2-264ENST00000637856 KCNA4P22459 653 aa10.59□□□□□ -0.71
SMARCA2-264ENST00000637856 WDR62O43379 1518 aa10.58□□□□□ -0.72
SMARCA2-264ENST00000637856 ADRA2BP18089 450 aa10.56□□□□□ -0.72
SMARCA2-264ENST00000637856 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
SMARCA2-264ENST00000637856 FANCD2Q9BXW9 1451 aa10.52□□□□□ -0.73
SMARCA2-264ENST00000637856 WIZO95785 1651 aa10.5□□□□□ -0.73
SMARCA2-264ENST00000637856 CFTRP13569 1480 aa10.45□□□□□ -0.74
SMARCA2-264ENST00000637856 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
SMARCA2-264ENST00000637856 RIMBP3CA6NJZ7 1639 aa10.41□□□□□ -0.74
SMARCA2-264ENST00000637856 RIMBP3BA6NNM3 1639 aa10.41□□□□□ -0.74
SMARCA2-264ENST00000637856 RIMBP3Q9UFD9 1639 aa10.41□□□□□ -0.74
SMARCA2-264ENST00000637856 CYB5RLQ6IPT4 315 aa10.41□□□□□ -0.74
SMARCA2-264ENST00000637856 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.74
SMARCA2-264ENST00000637856 ARHGEF11O15085 1522 aa10.36□□□□□ -0.75
SMARCA2-264ENST00000637856 ZNF608Q9ULD9 1512 aaPredicted RBP10.36□□□□□ -0.75
SMARCA2-264ENST00000637856 IFT140Q96RY7 1462 aa10.35□□□□□ -0.75
SMARCA2-264ENST00000637856 RSF1Q96T23 1441 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-264ENST00000637856 FBLN2P98095 1184 aa10.34□□□□□ -0.75
SMARCA2-264ENST00000637856 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-264ENST00000637856 CSRNP3Q8WYN3 585 aa10.32□□□□□ -0.76
SMARCA2-264ENST00000637856 PPP6R1Q9UPN7 881 aa10.32□□□□□ -0.76
SMARCA2-264ENST00000637856 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
SMARCA2-264ENST00000637856 AQRO60306 1485 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMARCA2-264ENST00000637856 CCDC88BA6NC98 1476 aa10.26□□□□□ -0.77
SMARCA2-264ENST00000637856 ABCC8Q09428 1581 aa10.26□□□□□ -0.77
SMARCA2-264ENST00000637856 EIF4G3O43432 1585 aaKnown RBP10.25□□□□□ -0.77
SMARCA2-264ENST00000637856 PRDM2Q13029 1718 aa10.24□□□□□ -0.77
SMARCA2-264ENST00000637856 ARAP1Q96P48 1450 aa10.24□□□□□ -0.77
SMARCA2-264ENST00000637856 CHD1O14646 1710 aa10.21□□□□□ -0.77
SMARCA2-264ENST00000637856 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
SMARCA2-264ENST00000637856 CHMP7Q8WUX9 453 aaPredicted RBP10.19□□□□□ -0.78
SMARCA2-264ENST00000637856 TDRD9Q8NDG6 1382 aaKnown RBP10.18□□□□□ -0.78
SMARCA2-264ENST00000637856 TARBP1Q13395 1621 aaKnown RBP10.17□□□□□ -0.78
SMARCA2-264ENST00000637856 SOGA1O94964 1423 aa10.16□□□□□ -0.78
SMARCA2-264ENST00000637856 POLA1P09884 1462 aaPredicted RBP10.16□□□□□ -0.78
SMARCA2-264ENST00000637856 RAD54L2Q9Y4B4 1467 aa10.16□□□□□ -0.78
SMARCA2-264ENST00000637856 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
SMARCA2-264ENST00000637856 SNAPC4Q5SXM2 1469 aa10.12□□□□□ -0.79
SMARCA2-264ENST00000637856 SYNJ1O43426 1573 aa10.09□□□□□ -0.79
SMARCA2-264ENST00000637856 CLASP1Q7Z460 1538 aa10.08□□□□□ -0.8
SMARCA2-264ENST00000637856 GRIN2BQ13224 1484 aa10.07□□□□□ -0.8
SMARCA2-264ENST00000637856 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
SMARCA2-264ENST00000637856 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
SMARCA2-264ENST00000637856 FOXD1Q16676 465 aa10.07□□□□□ -0.8
SMARCA2-264ENST00000637856 SYNJ2O15056 1496 aa10.05□□□□□ -0.8
SMARCA2-264ENST00000637856 GAPVD1Q14C86 1478 aa10.05□□□□□ -0.8
SMARCA2-264ENST00000637856 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
SMARCA2-264ENST00000637856 CUX1P39880 1505 aa10.01□□□□□ -0.81
SMARCA2-264ENST00000637856 PPP4R3CPQ6ZMV5 832 aa9.96□□□□□ -0.82
SMARCA2-264ENST00000637856 PBRM1Q86U86 1689 aa9.96□□□□□ -0.82
SMARCA2-264ENST00000637856 ERCC6L2Q5T890 1561 aa9.94□□□□□ -0.82
SMARCA2-264ENST00000637856 ABCA10Q8WWZ4 1543 aa9.93□□□□□ -0.82
SMARCA2-264ENST00000637856 GRIN2AQ12879 1464 aa9.91□□□□□ -0.82
SMARCA2-264ENST00000637856 NPM1P06748 294 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMARCA2-264ENST00000637856 CEP170Q5SW79 1584 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 371.8 ms