RNA–Protein interactions for RNA: ENST00000637434.1

SPTAN1-235, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-235ENST00000637434 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
SPTAN1-235ENST00000637434 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
SPTAN1-235ENST00000637434 ABCC9O60706 1549 aa25.53■■□□□ 1.68
SPTAN1-235ENST00000637434 DCAF8L2P0C7V8 631 aa24.71■■□□□ 1.55
SPTAN1-235ENST00000637434 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
SPTAN1-235ENST00000637434 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
SPTAN1-235ENST00000637434 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
SPTAN1-235ENST00000637434 NACADO15069 1562 aa24.41■■□□□ 1.5
SPTAN1-235ENST00000637434 MYO15BQ96JP2 1530 aa24.22■■□□□ 1.47
SPTAN1-235ENST00000637434 DCAF1Q9Y4B6 1507 aa24.19■■□□□ 1.46
SPTAN1-235ENST00000637434 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
SPTAN1-235ENST00000637434 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
SPTAN1-235ENST00000637434 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
SPTAN1-235ENST00000637434 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
SPTAN1-235ENST00000637434 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
SPTAN1-235ENST00000637434 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
SPTAN1-235ENST00000637434 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
SPTAN1-235ENST00000637434 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
SPTAN1-235ENST00000637434 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
SPTAN1-235ENST00000637434 SMARCA4P51532 1647 aa22.77■■□□□ 1.24
SPTAN1-235ENST00000637434 BAZ1AQ9NRL2 1556 aaPredicted RBP22.74■■□□□ 1.23
SPTAN1-235ENST00000637434 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
SPTAN1-235ENST00000637434 ATAD2BQ9ULI0 1458 aa22.64■■□□□ 1.21
SPTAN1-235ENST00000637434 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
SPTAN1-235ENST00000637434 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
SPTAN1-235ENST00000637434 BAZ1BQ9UIG0 1483 aaKnown RBP22.47■■□□□ 1.19
SPTAN1-235ENST00000637434 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
SPTAN1-235ENST00000637434 WIZO95785 1651 aa22.46■■□□□ 1.19
SPTAN1-235ENST00000637434 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
SPTAN1-235ENST00000637434 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
SPTAN1-235ENST00000637434 TOP2AP11388 1531 aaKnown RBP22.17■■□□□ 1.14
SPTAN1-235ENST00000637434 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
SPTAN1-235ENST00000637434 NESP48681 1621 aa22.12■■□□□ 1.13
SPTAN1-235ENST00000637434 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
SPTAN1-235ENST00000637434 ERCC6Q03468 1493 aa21.95■■□□□ 1.1
SPTAN1-235ENST00000637434 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
SPTAN1-235ENST00000637434 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
SPTAN1-235ENST00000637434 CUX2O14529 1486 aa21.89■■□□□ 1.09
SPTAN1-235ENST00000637434 CFTRP13569 1480 aa21.82■■□□□ 1.08
SPTAN1-235ENST00000637434 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
SPTAN1-235ENST00000637434 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
SPTAN1-235ENST00000637434 FANCD2Q9BXW9 1451 aa21.73■■□□□ 1.07
SPTAN1-235ENST00000637434 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
SPTAN1-235ENST00000637434 THOC2Q8NI27 1593 aaKnown RBP21.66■■□□□ 1.06
SPTAN1-235ENST00000637434 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
SPTAN1-235ENST00000637434 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
SPTAN1-235ENST00000637434 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
SPTAN1-235ENST00000637434 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
SPTAN1-235ENST00000637434 WDR62O43379 1518 aa21.5■■□□□ 1.03
SPTAN1-235ENST00000637434 TOPBP1Q92547 1522 aa21.38■■□□□ 1.01
SPTAN1-235ENST00000637434 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1
SPTAN1-235ENST00000637434 CUX1P39880 1505 aa21.28■■□□□ 1
SPTAN1-235ENST00000637434 ABCC8Q09428 1581 aa21.27■■□□□ 1
SPTAN1-235ENST00000637434 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
SPTAN1-235ENST00000637434 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
SPTAN1-235ENST00000637434 RAD54L2Q9Y4B4 1467 aa21.2■□□□□ 0.98
SPTAN1-235ENST00000637434 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
SPTAN1-235ENST00000637434 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
SPTAN1-235ENST00000637434 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
SPTAN1-235ENST00000637434 SYNJ1O43426 1573 aa21.15■□□□□ 0.98
SPTAN1-235ENST00000637434 SOGA1O94964 1423 aa21.14■□□□□ 0.97
SPTAN1-235ENST00000637434 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
SPTAN1-235ENST00000637434 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.965e-7■■■□□ 15.1
SPTAN1-235ENST00000637434 TDRD9Q8NDG6 1382 aaKnown RBP21.06■□□□□ 0.96
SPTAN1-235ENST00000637434 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
SPTAN1-235ENST00000637434 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
SPTAN1-235ENST00000637434 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
SPTAN1-235ENST00000637434 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
SPTAN1-235ENST00000637434 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
SPTAN1-235ENST00000637434 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
SPTAN1-235ENST00000637434 FBLN2P98095 1184 aa20.87■□□□□ 0.93
SPTAN1-235ENST00000637434 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
SPTAN1-235ENST00000637434 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
SPTAN1-235ENST00000637434 GRIN2BQ13224 1484 aa20.84■□□□□ 0.93
SPTAN1-235ENST00000637434 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
SPTAN1-235ENST00000637434 OSCARQ8IYS5 282 aa20.76■□□□□ 0.91
SPTAN1-235ENST00000637434 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
SPTAN1-235ENST00000637434 CHMP7Q8WUX9 453 aaPredicted RBP20.74■□□□□ 0.91
SPTAN1-235ENST00000637434 CHD1O14646 1710 aa20.73■□□□□ 0.91
SPTAN1-235ENST00000637434 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
SPTAN1-235ENST00000637434 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
SPTAN1-235ENST00000637434 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
SPTAN1-235ENST00000637434 ADAMTS12P58397 1594 aa20.66■□□□□ 0.9
SPTAN1-235ENST00000637434 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
SPTAN1-235ENST00000637434 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
SPTAN1-235ENST00000637434 IGF1RP08069 1367 aa20.63■□□□□ 0.89
SPTAN1-235ENST00000637434 FHAD1B1AJZ9 1412 aa20.62■□□□□ 0.89
SPTAN1-235ENST00000637434 GRIN2AQ12879 1464 aa20.59■□□□□ 0.89
SPTAN1-235ENST00000637434 RIMBP3CA6NJZ7 1639 aa20.56■□□□□ 0.88
SPTAN1-235ENST00000637434 RIMBP3BA6NNM3 1639 aa20.56■□□□□ 0.88
SPTAN1-235ENST00000637434 RIMBP3Q9UFD9 1639 aa20.56■□□□□ 0.88
SPTAN1-235ENST00000637434 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
SPTAN1-235ENST00000637434 FAM9AQ8IZU1 332 aaPredicted RBP20.52■□□□□ 0.88
SPTAN1-235ENST00000637434 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
SPTAN1-235ENST00000637434 CEP170Q5SW79 1584 aa20.5■□□□□ 0.87
SPTAN1-235ENST00000637434 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
SPTAN1-235ENST00000637434 CUL7Q14999 1698 aa20.48■□□□□ 0.87
SPTAN1-235ENST00000637434 NUP160Q12769 1436 aa20.47■□□□□ 0.87
SPTAN1-235ENST00000637434 ARHGEF11O15085 1522 aa20.44■□□□□ 0.86
SPTAN1-235ENST00000637434 RAPGEF2Q9Y4G8 1499 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms