RNA–Protein interactions for RNA: ENST00000636199.1

AMT-232, Transcript of aminomethyltransferase, humanhuman

TSL 5 BASIC

Gene AMT, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-232ENST00000636199 NISCHQ9Y2I1 1504 aa37.84■■■■□ 3.65
AMT-232ENST00000636199 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
AMT-232ENST00000636199 ABCC9O60706 1549 aa32.76■■■□□ 2.84
AMT-232ENST00000636199 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
AMT-232ENST00000636199 NACADO15069 1562 aa31.57■■■□□ 2.64
AMT-232ENST00000636199 ZCCHC6Q5VYS8 1495 aaKnown RBP31.55■■■□□ 2.64
AMT-232ENST00000636199 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.62
AMT-232ENST00000636199 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
AMT-232ENST00000636199 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
AMT-232ENST00000636199 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
AMT-232ENST00000636199 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
AMT-232ENST00000636199 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
AMT-232ENST00000636199 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.493e-6■■■■□ 23.3
AMT-232ENST00000636199 SHROOM4Q9ULL8 1493 aa30.33■■■□□ 2.45
AMT-232ENST00000636199 DNAJC5BQ9UF47 199 aa30.04■■■□□ 2.4
AMT-232ENST00000636199 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
AMT-232ENST00000636199 CC2D2AQ9P2K1 1620 aa29.69■■■□□ 2.34
AMT-232ENST00000636199 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
AMT-232ENST00000636199 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
AMT-232ENST00000636199 BAZ1AQ9NRL2 1556 aaPredicted RBP29.31■■■□□ 2.28
AMT-232ENST00000636199 MROH2BQ7Z745 1585 aa29.16■■■□□ 2.26
AMT-232ENST00000636199 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
AMT-232ENST00000636199 NCAPD3P42695 1498 aa29.13■■■□□ 2.25
AMT-232ENST00000636199 SMARCA2P51531 1590 aa29.12■■■□□ 2.25
AMT-232ENST00000636199 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
AMT-232ENST00000636199 HMGXB3Q12766 1538 aa29.02■■■□□ 2.24
AMT-232ENST00000636199 BAZ1BQ9UIG0 1483 aaKnown RBP28.89■■■□□ 2.22
AMT-232ENST00000636199 WIZO95785 1651 aa28.87■■■□□ 2.21
AMT-232ENST00000636199 RSF1Q96T23 1441 aaPredicted RBP28.85■■■□□ 2.21
AMT-232ENST00000636199 TOP2AP11388 1531 aaKnown RBP28.55■■■□□ 2.16
AMT-232ENST00000636199 NESP48681 1621 aa28.41■■■□□ 2.14
AMT-232ENST00000636199 LAMC3Q9Y6N6 1575 aa28.36■■■□□ 2.13
AMT-232ENST00000636199 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.11
AMT-232ENST00000636199 CCDC88BA6NC98 1476 aa28.2■■■□□ 2.1
AMT-232ENST00000636199 ERCC6Q03468 1493 aa28.2■■■□□ 2.1
AMT-232ENST00000636199 CFTRP13569 1480 aa28.14■■■□□ 2.1
AMT-232ENST00000636199 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
AMT-232ENST00000636199 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
AMT-232ENST00000636199 SUPT5HO00267 1087 aaKnown RBP28.07■■■□□ 2.08
AMT-232ENST00000636199 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
AMT-232ENST00000636199 THOC2Q8NI27 1593 aaKnown RBP28.01■■■□□ 2.07
AMT-232ENST00000636199 FANCD2Q9BXW9 1451 aa27.94■■■□□ 2.06
AMT-232ENST00000636199 CUX2O14529 1486 aa27.93■■■□□ 2.06
AMT-232ENST00000636199 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
AMT-232ENST00000636199 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
AMT-232ENST00000636199 WDR62O43379 1518 aa27.79■■■□□ 2.04
AMT-232ENST00000636199 URB2Q14146 1524 aaKnown RBP27.69■■■□□ 2.02
AMT-232ENST00000636199 TOPBP1Q92547 1522 aa27.52■■■□□ 2
AMT-232ENST00000636199 DNMBPQ6XZF7 1577 aa27.51■■□□□ 1.99
AMT-232ENST00000636199 ABCC8Q09428 1581 aa27.5■■□□□ 1.99
AMT-232ENST00000636199 CUX1P39880 1505 aa27.36■■□□□ 1.97
AMT-232ENST00000636199 IFT140Q96RY7 1462 aa27.31■■□□□ 1.96
AMT-232ENST00000636199 POLA1P09884 1462 aaPredicted RBP27.3■■□□□ 1.96
AMT-232ENST00000636199 TARBP1Q13395 1621 aaKnown RBP27.26■■□□□ 1.95
AMT-232ENST00000636199 FGD5Q6ZNL6 1462 aa27.22■■□□□ 1.95
AMT-232ENST00000636199 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
AMT-232ENST00000636199 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
AMT-232ENST00000636199 WRNQ14191 1432 aaPredicted RBP eCLIP27.17■■□□□ 1.94
AMT-232ENST00000636199 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
AMT-232ENST00000636199 TOP2BQ02880 1626 aa27.15■■□□□ 1.94
AMT-232ENST00000636199 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
AMT-232ENST00000636199 SOGA1O94964 1423 aa27.14■■□□□ 1.94
AMT-232ENST00000636199 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
AMT-232ENST00000636199 WDR97A6NE52 1622 aa27.08■■□□□ 1.93
AMT-232ENST00000636199 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.928e-7■■■■□ 24.7
AMT-232ENST00000636199 ABCA10Q8WWZ4 1543 aa26.99■■□□□ 1.91
AMT-232ENST00000636199 TDRD9Q8NDG6 1382 aaKnown RBP26.98■■□□□ 1.91
AMT-232ENST00000636199 DNAJC5Q9H3Z4 198 aa26.96■■□□□ 1.91
AMT-232ENST00000636199 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
AMT-232ENST00000636199 PBRM1Q86U86 1689 aa26.85■■□□□ 1.89
AMT-232ENST00000636199 GAPVD1Q14C86 1478 aa26.85■■□□□ 1.89
AMT-232ENST00000636199 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
AMT-232ENST00000636199 SNAPC4Q5SXM2 1469 aa26.79■■□□□ 1.88
AMT-232ENST00000636199 CHD1O14646 1710 aa26.79■■□□□ 1.88
AMT-232ENST00000636199 MAGI1Q96QZ7 1491 aaPredicted RBP26.77■■□□□ 1.88
AMT-232ENST00000636199 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
AMT-232ENST00000636199 SYNJ2O15056 1496 aa26.66■■□□□ 1.86
AMT-232ENST00000636199 ERICH3Q5RHP9 1530 aa26.66■■□□□ 1.86
AMT-232ENST00000636199 ADAMTS12P58397 1594 aa26.62■■□□□ 1.85
AMT-232ENST00000636199 FBLN2P98095 1184 aa26.61■■□□□ 1.85
AMT-232ENST00000636199 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
AMT-232ENST00000636199 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
AMT-232ENST00000636199 FHAD1B1AJZ9 1412 aa26.53■■□□□ 1.84
AMT-232ENST00000636199 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
AMT-232ENST00000636199 GRIN2AQ12879 1464 aa26.5■■□□□ 1.83
AMT-232ENST00000636199 IGF1RP08069 1367 aa26.49■■□□□ 1.83
AMT-232ENST00000636199 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
AMT-232ENST00000636199 CUL7Q14999 1698 aa26.44■■□□□ 1.82
AMT-232ENST00000636199 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
AMT-232ENST00000636199 NUP160Q12769 1436 aa26.4■■□□□ 1.82
AMT-232ENST00000636199 CEP170Q5SW79 1584 aa26.4■■□□□ 1.82
AMT-232ENST00000636199 RIMBP3CA6NJZ7 1639 aa26.38■■□□□ 1.81
AMT-232ENST00000636199 RIMBP3BA6NNM3 1639 aa26.38■■□□□ 1.81
AMT-232ENST00000636199 RIMBP3Q9UFD9 1639 aa26.38■■□□□ 1.81
AMT-232ENST00000636199 ARHGEF11O15085 1522 aa26.36■■□□□ 1.81
AMT-232ENST00000636199 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
AMT-232ENST00000636199 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
AMT-232ENST00000636199 SHROOM2Q13796 1616 aa26.23■■□□□ 1.79
AMT-232ENST00000636199 RAPGEF2Q9Y4G8 1499 aa26.18■■□□□ 1.78
AMT-232ENST00000636199 ARAP1Q96P48 1450 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms