RNA–Protein interactions for RNA: ENST00000636070.1

AMT-229, Transcript of aminomethyltransferase, humanhuman

TSL 2

Gene AMT, Length 1,827 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-229ENST00000636070 NISCHQ9Y2I1 1504 aa37.9■■■■□ 3.66
AMT-229ENST00000636070 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
AMT-229ENST00000636070 ZCCHC6Q5VYS8 1495 aaKnown RBP31.76■■■□□ 2.67
AMT-229ENST00000636070 ABCC9O60706 1549 aa31.59■■■□□ 2.65
AMT-229ENST00000636070 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.63
AMT-229ENST00000636070 DCAF1Q9Y4B6 1507 aa31.4■■■□□ 2.62
AMT-229ENST00000636070 MYO15BQ96JP2 1530 aa31.17■■■□□ 2.58
AMT-229ENST00000636070 NACADO15069 1562 aa31.03■■■□□ 2.56
AMT-229ENST00000636070 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
AMT-229ENST00000636070 SHROOM4Q9ULL8 1493 aa30.65■■■□□ 2.5
AMT-229ENST00000636070 SCRIBQ14160 1630 aa30.4■■■□□ 2.46
AMT-229ENST00000636070 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
AMT-229ENST00000636070 BICRAQ9NZM4 1560 aa29.77■■■□□ 2.36
AMT-229ENST00000636070 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.353e-6■■■■□ 23.3
AMT-229ENST00000636070 SUPT5HO00267 1087 aaKnown RBP29.43■■■□□ 2.3
AMT-229ENST00000636070 CECR2Q9BXF3 1484 aa29.41■■■□□ 2.3
AMT-229ENST00000636070 BAZ1AQ9NRL2 1556 aaPredicted RBP29.32■■■□□ 2.28
AMT-229ENST00000636070 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
AMT-229ENST00000636070 MROH2BQ7Z745 1585 aa29.22■■■□□ 2.27
AMT-229ENST00000636070 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
AMT-229ENST00000636070 EIF4G1Q04637 1599 aaKnown RBP28.95■■■□□ 2.23
AMT-229ENST00000636070 WIZO95785 1651 aa28.92■■■□□ 2.22
AMT-229ENST00000636070 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
AMT-229ENST00000636070 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
AMT-229ENST00000636070 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
AMT-229ENST00000636070 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.19
AMT-229ENST00000636070 NCAPD3P42695 1498 aa28.64■■■□□ 2.18
AMT-229ENST00000636070 BAZ1BQ9UIG0 1483 aaKnown RBP28.64■■■□□ 2.17
AMT-229ENST00000636070 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
AMT-229ENST00000636070 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
AMT-229ENST00000636070 CCDC88BA6NC98 1476 aa28.4■■■□□ 2.14
AMT-229ENST00000636070 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
AMT-229ENST00000636070 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
AMT-229ENST00000636070 CFTRP13569 1480 aa27.91■■■□□ 2.06
AMT-229ENST00000636070 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
AMT-229ENST00000636070 TRIM41Q8WV44 630 aa27.77■■■□□ 2.04
AMT-229ENST00000636070 LAMC3Q9Y6N6 1575 aa27.7■■■□□ 2.02
AMT-229ENST00000636070 ABCC8Q09428 1581 aa27.63■■■□□ 2.01
AMT-229ENST00000636070 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
AMT-229ENST00000636070 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
AMT-229ENST00000636070 NESP48681 1621 aa27.61■■■□□ 2.01
AMT-229ENST00000636070 PDS5BQ9NTI5 1447 aa27.56■■■□□ 2
AMT-229ENST00000636070 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
AMT-229ENST00000636070 CEP164Q9UPV0 1460 aa27.42■■□□□ 1.98
AMT-229ENST00000636070 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
AMT-229ENST00000636070 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
AMT-229ENST00000636070 CUX1P39880 1505 aa27.34■■□□□ 1.97
AMT-229ENST00000636070 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.96
AMT-229ENST00000636070 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
AMT-229ENST00000636070 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
AMT-229ENST00000636070 ERCC6Q03468 1493 aa27.2■■□□□ 1.94
AMT-229ENST00000636070 TOPBP1Q92547 1522 aa27.2■■□□□ 1.94
AMT-229ENST00000636070 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
AMT-229ENST00000636070 EEA1Q15075 1411 aa27.15■■□□□ 1.94
AMT-229ENST00000636070 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
AMT-229ENST00000636070 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
AMT-229ENST00000636070 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
AMT-229ENST00000636070 SOGA1O94964 1423 aa27.11■■□□□ 1.93
AMT-229ENST00000636070 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
AMT-229ENST00000636070 CSRNP3Q8WYN3 585 aa27.01■■□□□ 1.91
AMT-229ENST00000636070 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
AMT-229ENST00000636070 WDR62O43379 1518 aa26.99■■□□□ 1.91
AMT-229ENST00000636070 RUSC2Q8N2Y8 1516 aa26.97■■□□□ 1.91
AMT-229ENST00000636070 CUX2O14529 1486 aa26.92■■□□□ 1.9
AMT-229ENST00000636070 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
AMT-229ENST00000636070 ABCA10Q8WWZ4 1543 aa26.91■■□□□ 1.9
AMT-229ENST00000636070 LOC105371045A0A1W2PR82 267 aa26.9■■□□□ 1.9
AMT-229ENST00000636070 THOC2Q8NI27 1593 aaKnown RBP26.9■■□□□ 1.9
AMT-229ENST00000636070 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
AMT-229ENST00000636070 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
AMT-229ENST00000636070 IGF1RP08069 1367 aa26.74■■□□□ 1.87
AMT-229ENST00000636070 TDRD9Q8NDG6 1382 aaKnown RBP26.73■■□□□ 1.87
AMT-229ENST00000636070 WDR97A6NE52 1622 aa26.73■■□□□ 1.87
AMT-229ENST00000636070 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
AMT-229ENST00000636070 GOLGA3Q08378 1498 aa26.69■■□□□ 1.86
AMT-229ENST00000636070 KIF21BO75037 1637 aa26.69■■□□□ 1.86
AMT-229ENST00000636070 GAPVD1Q14C86 1478 aa26.69■■□□□ 1.86
AMT-229ENST00000636070 PRXQ9BXM0 1461 aa26.67■■□□□ 1.86
AMT-229ENST00000636070 ABCA5Q8WWZ7 1642 aa26.64■■□□□ 1.86
AMT-229ENST00000636070 UBTFP17480 764 aaKnown RBP26.64■■□□□ 1.85
AMT-229ENST00000636070 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
AMT-229ENST00000636070 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
AMT-229ENST00000636070 AQRO60306 1485 aaKnown RBP eCLIP26.58■■□□□ 1.858e-7■■■■□ 24.7
AMT-229ENST00000636070 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.85
AMT-229ENST00000636070 RAPGEF2Q9Y4G8 1499 aa26.58■■□□□ 1.85
AMT-229ENST00000636070 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
AMT-229ENST00000636070 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
AMT-229ENST00000636070 CUL7Q14999 1698 aa26.53■■□□□ 1.84
AMT-229ENST00000636070 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
AMT-229ENST00000636070 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
AMT-229ENST00000636070 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
AMT-229ENST00000636070 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
AMT-229ENST00000636070 CEP162Q5TB80 1403 aa26.35■■□□□ 1.81
AMT-229ENST00000636070 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
AMT-229ENST00000636070 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
AMT-229ENST00000636070 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
AMT-229ENST00000636070 CLIP1P30622 1438 aa26.25■■□□□ 1.79
AMT-229ENST00000636070 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
AMT-229ENST00000636070 RANGAP1P46060 587 aaPredicted RBP26.19■■□□□ 1.78
AMT-229ENST00000636070 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms