RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
SMARCA2-230ENST00000634925 CCDC180Q9P1Z9 1646 aa23.07■■□□□ 1.28
SMARCA2-230ENST00000634925 ABCC9O60706 1549 aa22.15■■□□□ 1.14
SMARCA2-230ENST00000634925 ZCCHC6Q5VYS8 1495 aaKnown RBP21.94■■□□□ 1.1
SMARCA2-230ENST00000634925 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
SMARCA2-230ENST00000634925 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
SMARCA2-230ENST00000634925 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
SMARCA2-230ENST00000634925 NACADO15069 1562 aa21.55■■□□□ 1.04
SMARCA2-230ENST00000634925 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
SMARCA2-230ENST00000634925 SCRIBQ14160 1630 aa21.14■□□□□ 0.98
SMARCA2-230ENST00000634925 UNC13AQ9UPW8 1703 aa21.11■□□□□ 0.97
SMARCA2-230ENST00000634925 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.97
SMARCA2-230ENST00000634925 BICRAQ9NZM4 1560 aa20.86■□□□□ 0.93
SMARCA2-230ENST00000634925 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMARCA2-230ENST00000634925 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
SMARCA2-230ENST00000634925 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
SMARCA2-230ENST00000634925 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
SMARCA2-230ENST00000634925 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
SMARCA2-230ENST00000634925 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
SMARCA2-230ENST00000634925 RSF1Q96T23 1441 aaPredicted RBP20.17■□□□□ 0.82
SMARCA2-230ENST00000634925 WIZO95785 1651 aa20.08■□□□□ 0.81
SMARCA2-230ENST00000634925 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.8
SMARCA2-230ENST00000634925 CC2D2AQ9P2K1 1620 aa20.06■□□□□ 0.8
SMARCA2-230ENST00000634925 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
SMARCA2-230ENST00000634925 ATAD2BQ9ULI0 1458 aa20■□□□□ 0.79
SMARCA2-230ENST00000634925 SMARCA2P51531 1590 aa19.97■□□□□ 0.79
SMARCA2-230ENST00000634925 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
SMARCA2-230ENST00000634925 NCAPD3P42695 1498 aa19.89■□□□□ 0.77
SMARCA2-230ENST00000634925 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
SMARCA2-230ENST00000634925 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
SMARCA2-230ENST00000634925 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
SMARCA2-230ENST00000634925 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
SMARCA2-230ENST00000634925 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
SMARCA2-230ENST00000634925 NESP48681 1621 aa19.33■□□□□ 0.69
SMARCA2-230ENST00000634925 CFTRP13569 1480 aa19.33■□□□□ 0.69
SMARCA2-230ENST00000634925 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
SMARCA2-230ENST00000634925 LAMC3Q9Y6N6 1575 aa19.29■□□□□ 0.68
SMARCA2-230ENST00000634925 KIF21AQ7Z4S6 1674 aa19.14■□□□□ 0.65
SMARCA2-230ENST00000634925 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
SMARCA2-230ENST00000634925 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
SMARCA2-230ENST00000634925 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
SMARCA2-230ENST00000634925 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
SMARCA2-230ENST00000634925 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
SMARCA2-230ENST00000634925 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
SMARCA2-230ENST00000634925 WRNQ14191 1432 aaPredicted RBP eCLIP18.98■□□□□ 0.63
SMARCA2-230ENST00000634925 SYNJ1O43426 1573 aa18.96■□□□□ 0.63
SMARCA2-230ENST00000634925 CUX1P39880 1505 aa18.96■□□□□ 0.63
SMARCA2-230ENST00000634925 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
SMARCA2-230ENST00000634925 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
SMARCA2-230ENST00000634925 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
SMARCA2-230ENST00000634925 BIVM-ERCC5R4GMW8 1640 aa18.91■□□□□ 0.62
SMARCA2-230ENST00000634925 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
SMARCA2-230ENST00000634925 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
SMARCA2-230ENST00000634925 TOPBP1Q92547 1522 aa18.9■□□□□ 0.62
SMARCA2-230ENST00000634925 TRIM41Q8WV44 630 aa18.89■□□□□ 0.62
SMARCA2-230ENST00000634925 WDR62O43379 1518 aa18.85■□□□□ 0.61
SMARCA2-230ENST00000634925 FGD5Q6ZNL6 1462 aa18.8■□□□□ 0.6
SMARCA2-230ENST00000634925 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
SMARCA2-230ENST00000634925 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
SMARCA2-230ENST00000634925 CUX2O14529 1486 aa18.7■□□□□ 0.58
SMARCA2-230ENST00000634925 SOGA1O94964 1423 aa18.69■□□□□ 0.58
SMARCA2-230ENST00000634925 TARBP1Q13395 1621 aaKnown RBP18.66■□□□□ 0.58
SMARCA2-230ENST00000634925 WDR97A6NE52 1622 aa18.64■□□□□ 0.57
SMARCA2-230ENST00000634925 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
SMARCA2-230ENST00000634925 IFT140Q96RY7 1462 aa18.61■□□□□ 0.57
SMARCA2-230ENST00000634925 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
SMARCA2-230ENST00000634925 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
SMARCA2-230ENST00000634925 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
SMARCA2-230ENST00000634925 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
SMARCA2-230ENST00000634925 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
SMARCA2-230ENST00000634925 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
SMARCA2-230ENST00000634925 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMARCA2-230ENST00000634925 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
SMARCA2-230ENST00000634925 EEA1Q15075 1411 aa18.48■□□□□ 0.55
SMARCA2-230ENST00000634925 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
SMARCA2-230ENST00000634925 PBRM1Q86U86 1689 aa18.46■□□□□ 0.55
SMARCA2-230ENST00000634925 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
SMARCA2-230ENST00000634925 IGF1RP08069 1367 aa18.43■□□□□ 0.54
SMARCA2-230ENST00000634925 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
SMARCA2-230ENST00000634925 GRIN2BQ13224 1484 aa18.4■□□□□ 0.54
SMARCA2-230ENST00000634925 CUL7Q14999 1698 aa18.34■□□□□ 0.53
SMARCA2-230ENST00000634925 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.52
SMARCA2-230ENST00000634925 PRXQ9BXM0 1461 aa18.33■□□□□ 0.52
SMARCA2-230ENST00000634925 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
SMARCA2-230ENST00000634925 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
SMARCA2-230ENST00000634925 KIF21BO75037 1637 aa18.31■□□□□ 0.52
SMARCA2-230ENST00000634925 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
SMARCA2-230ENST00000634925 MAGI1Q96QZ7 1491 aaPredicted RBP18.28■□□□□ 0.52
SMARCA2-230ENST00000634925 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
SMARCA2-230ENST00000634925 RAPGEF2Q9Y4G8 1499 aa18.28■□□□□ 0.52
SMARCA2-230ENST00000634925 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.51
SMARCA2-230ENST00000634925 SYNJ2O15056 1496 aa18.22■□□□□ 0.51
SMARCA2-230ENST00000634925 GOLGA3Q08378 1498 aa18.22■□□□□ 0.51
SMARCA2-230ENST00000634925 CHD1O14646 1710 aa18.2■□□□□ 0.5
SMARCA2-230ENST00000634925 FBLN2P98095 1184 aa18.18■□□□□ 0.5
SMARCA2-230ENST00000634925 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
SMARCA2-230ENST00000634925 GRIN2AQ12879 1464 aa18.17■□□□□ 0.5
SMARCA2-230ENST00000634925 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
SMARCA2-230ENST00000634925 CTTNBP2Q8WZ74 1663 aa18.11■□□□□ 0.49
SMARCA2-230ENST00000634925 CEP170Q5SW79 1584 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms