RNA–Protein interactions for RNA: ENST00000634508.1

SEC24C-206, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 4

Gene SEC24C, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-206ENST00000634508 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
SEC24C-206ENST00000634508 ABCC9O60706 1549 aa19.95■□□□□ 0.78
SEC24C-206ENST00000634508 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
SEC24C-206ENST00000634508 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
SEC24C-206ENST00000634508 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
SEC24C-206ENST00000634508 NACADO15069 1562 aa18.74■□□□□ 0.59
SEC24C-206ENST00000634508 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
SEC24C-206ENST00000634508 DCAF8L2P0C7V8 631 aa18.49■□□□□ 0.55
SEC24C-206ENST00000634508 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
SEC24C-206ENST00000634508 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
SEC24C-206ENST00000634508 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
SEC24C-206ENST00000634508 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
SEC24C-206ENST00000634508 CECR2Q9BXF3 1484 aa18.06■□□□□ 0.48
SEC24C-206ENST00000634508 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
SEC24C-206ENST00000634508 DCAF1Q9Y4B6 1507 aa18.03■□□□□ 0.48
SEC24C-206ENST00000634508 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
SEC24C-206ENST00000634508 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
SEC24C-206ENST00000634508 DNAJC5Q9H3Z4 198 aa17.84■□□□□ 0.45
SEC24C-206ENST00000634508 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
SEC24C-206ENST00000634508 CUX2O14529 1486 aa17.43■□□□□ 0.38
SEC24C-206ENST00000634508 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
SEC24C-206ENST00000634508 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
SEC24C-206ENST00000634508 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
SEC24C-206ENST00000634508 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
SEC24C-206ENST00000634508 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
SEC24C-206ENST00000634508 NESP48681 1621 aa17.03■□□□□ 0.32
SEC24C-206ENST00000634508 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
SEC24C-206ENST00000634508 BAZ1BQ9UIG0 1483 aaKnown RBP16.96■□□□□ 0.31
SEC24C-206ENST00000634508 THOC2Q8NI27 1593 aaKnown RBP16.95■□□□□ 0.3
SEC24C-206ENST00000634508 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
SEC24C-206ENST00000634508 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
SEC24C-206ENST00000634508 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
SEC24C-206ENST00000634508 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
SEC24C-206ENST00000634508 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
SEC24C-206ENST00000634508 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
SEC24C-206ENST00000634508 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
SEC24C-206ENST00000634508 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
SEC24C-206ENST00000634508 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
SEC24C-206ENST00000634508 WDR62O43379 1518 aa16.69■□□□□ 0.26
SEC24C-206ENST00000634508 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
SEC24C-206ENST00000634508 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
SEC24C-206ENST00000634508 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
SEC24C-206ENST00000634508 WIZO95785 1651 aa16.5■□□□□ 0.23
SEC24C-206ENST00000634508 CFTRP13569 1480 aa16.48■□□□□ 0.23
SEC24C-206ENST00000634508 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
SEC24C-206ENST00000634508 RIMBP3CA6NJZ7 1639 aa16.33■□□□□ 0.2
SEC24C-206ENST00000634508 RIMBP3BA6NNM3 1639 aa16.33■□□□□ 0.2
SEC24C-206ENST00000634508 RIMBP3Q9UFD9 1639 aa16.33■□□□□ 0.2
SEC24C-206ENST00000634508 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
SEC24C-206ENST00000634508 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
SEC24C-206ENST00000634508 IFT140Q96RY7 1462 aa16.28■□□□□ 0.2
SEC24C-206ENST00000634508 PRDM2Q13029 1718 aa16.27■□□□□ 0.19
SEC24C-206ENST00000634508 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
SEC24C-206ENST00000634508 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
SEC24C-206ENST00000634508 ABCC8Q09428 1581 aa16.2■□□□□ 0.18
SEC24C-206ENST00000634508 CYB5RLQ6IPT4 315 aa16.19■□□□□ 0.18
SEC24C-206ENST00000634508 TOPBP1Q92547 1522 aa16.16■□□□□ 0.18
SEC24C-206ENST00000634508 CCDC88BA6NC98 1476 aa16.12■□□□□ 0.17
SEC24C-206ENST00000634508 EIF4G3O43432 1585 aaKnown RBP16.1■□□□□ 0.17
SEC24C-206ENST00000634508 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
SEC24C-206ENST00000634508 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
SEC24C-206ENST00000634508 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.167e-7■■■■□ 21.5
SEC24C-206ENST00000634508 CHD1O14646 1710 aa16.05■□□□□ 0.16
SEC24C-206ENST00000634508 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
SEC24C-206ENST00000634508 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
SEC24C-206ENST00000634508 FBLN2P98095 1184 aa16.02■□□□□ 0.16
SEC24C-206ENST00000634508 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
SEC24C-206ENST00000634508 WDR97A6NE52 1622 aa15.93■□□□□ 0.14
SEC24C-206ENST00000634508 SOGA1O94964 1423 aa15.93■□□□□ 0.14
SEC24C-206ENST00000634508 AEBP2Q6ZN18 517 aaPredicted RBP15.91■□□□□ 0.14
SEC24C-206ENST00000634508 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
SEC24C-206ENST00000634508 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
SEC24C-206ENST00000634508 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
SEC24C-206ENST00000634508 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
SEC24C-206ENST00000634508 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
SEC24C-206ENST00000634508 MAGI1Q96QZ7 1491 aaPredicted RBP15.87■□□□□ 0.13
SEC24C-206ENST00000634508 SNAPC4Q5SXM2 1469 aa15.85■□□□□ 0.13
SEC24C-206ENST00000634508 GRIN2BQ13224 1484 aa15.82■□□□□ 0.12
SEC24C-206ENST00000634508 SYNJ2O15056 1496 aa15.81■□□□□ 0.12
SEC24C-206ENST00000634508 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
SEC24C-206ENST00000634508 GAPVD1Q14C86 1478 aa15.77■□□□□ 0.11
SEC24C-206ENST00000634508 CUX1P39880 1505 aa15.73■□□□□ 0.11
SEC24C-206ENST00000634508 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
SEC24C-206ENST00000634508 ABCA10Q8WWZ4 1543 aa15.66■□□□□ 0.1
SEC24C-206ENST00000634508 ABCA5Q8WWZ7 1642 aa15.62■□□□□ 0.09
SEC24C-206ENST00000634508 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
SEC24C-206ENST00000634508 NUP160Q12769 1436 aa15.59■□□□□ 0.09
SEC24C-206ENST00000634508 CEP170Q5SW79 1584 aa15.57■□□□□ 0.08
SEC24C-206ENST00000634508 ERCC6L2Q5T890 1561 aa15.56■□□□□ 0.08
SEC24C-206ENST00000634508 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
SEC24C-206ENST00000634508 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
SEC24C-206ENST00000634508 ADAMTS12P58397 1594 aa15.52■□□□□ 0.07
SEC24C-206ENST00000634508 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.07
SEC24C-206ENST00000634508 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
SEC24C-206ENST00000634508 JPH4Q96JJ6 628 aa15.46■□□□□ 0.07
SEC24C-206ENST00000634508 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.07
SEC24C-206ENST00000634508 PRG4Q92954 1404 aaPredicted RBP15.44■□□□□ 0.06
SEC24C-206ENST00000634508 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
SEC24C-206ENST00000634508 ABCC10Q5T3U5 1492 aa15.42■□□□□ 0.06
SEC24C-206ENST00000634508 FAM69CQ0P6D2 419 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 1865.7 ms