RNA–Protein interactions for RNA: ENST00000631315.1

SPTAN1-226, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-226ENST00000631315 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
SPTAN1-226ENST00000631315 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
SPTAN1-226ENST00000631315 ABCC9O60706 1549 aa27.28■■□□□ 1.96
SPTAN1-226ENST00000631315 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
SPTAN1-226ENST00000631315 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
SPTAN1-226ENST00000631315 NACADO15069 1562 aa26.21■■□□□ 1.79
SPTAN1-226ENST00000631315 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
SPTAN1-226ENST00000631315 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
SPTAN1-226ENST00000631315 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
SPTAN1-226ENST00000631315 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
SPTAN1-226ENST00000631315 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.68
SPTAN1-226ENST00000631315 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
SPTAN1-226ENST00000631315 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
SPTAN1-226ENST00000631315 SHROOM4Q9ULL8 1493 aa25.12■■□□□ 1.61
SPTAN1-226ENST00000631315 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
SPTAN1-226ENST00000631315 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
SPTAN1-226ENST00000631315 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
SPTAN1-226ENST00000631315 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
SPTAN1-226ENST00000631315 BAZ1AQ9NRL2 1556 aaPredicted RBP24.37■■□□□ 1.49
SPTAN1-226ENST00000631315 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
SPTAN1-226ENST00000631315 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
SPTAN1-226ENST00000631315 ATAD2BQ9ULI0 1458 aa24.25■■□□□ 1.47
SPTAN1-226ENST00000631315 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
SPTAN1-226ENST00000631315 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
SPTAN1-226ENST00000631315 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.45
SPTAN1-226ENST00000631315 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
SPTAN1-226ENST00000631315 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
SPTAN1-226ENST00000631315 RSF1Q96T23 1441 aaPredicted RBP24.04■■□□□ 1.44
SPTAN1-226ENST00000631315 WIZO95785 1651 aa23.97■■□□□ 1.43
SPTAN1-226ENST00000631315 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
SPTAN1-226ENST00000631315 SUPT5HO00267 1087 aaKnown RBP23.65■■□□□ 1.38
SPTAN1-226ENST00000631315 NESP48681 1621 aa23.61■■□□□ 1.37
SPTAN1-226ENST00000631315 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
SPTAN1-226ENST00000631315 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
SPTAN1-226ENST00000631315 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
SPTAN1-226ENST00000631315 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
SPTAN1-226ENST00000631315 PDS5BQ9NTI5 1447 aa23.44■■□□□ 1.34
SPTAN1-226ENST00000631315 CFTRP13569 1480 aa23.4■■□□□ 1.34
SPTAN1-226ENST00000631315 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
SPTAN1-226ENST00000631315 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
SPTAN1-226ENST00000631315 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
SPTAN1-226ENST00000631315 CUX2O14529 1486 aa23.17■■□□□ 1.3
SPTAN1-226ENST00000631315 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
SPTAN1-226ENST00000631315 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.29
SPTAN1-226ENST00000631315 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
SPTAN1-226ENST00000631315 WDR62O43379 1518 aa23.03■■□□□ 1.28
SPTAN1-226ENST00000631315 URB2Q14146 1524 aaKnown RBP22.99■■□□□ 1.27
SPTAN1-226ENST00000631315 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
SPTAN1-226ENST00000631315 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
SPTAN1-226ENST00000631315 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
SPTAN1-226ENST00000631315 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
SPTAN1-226ENST00000631315 CUX1P39880 1505 aa22.74■■□□□ 1.23
SPTAN1-226ENST00000631315 IFT140Q96RY7 1462 aa22.73■■□□□ 1.23
SPTAN1-226ENST00000631315 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
SPTAN1-226ENST00000631315 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
SPTAN1-226ENST00000631315 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
SPTAN1-226ENST00000631315 SOGA1O94964 1423 aa22.66■■□□□ 1.22
SPTAN1-226ENST00000631315 RAD54L2Q9Y4B4 1467 aa22.63■■□□□ 1.21
SPTAN1-226ENST00000631315 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
SPTAN1-226ENST00000631315 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
SPTAN1-226ENST00000631315 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
SPTAN1-226ENST00000631315 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
SPTAN1-226ENST00000631315 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
SPTAN1-226ENST00000631315 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.2
SPTAN1-226ENST00000631315 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
SPTAN1-226ENST00000631315 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
SPTAN1-226ENST00000631315 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
SPTAN1-226ENST00000631315 GAPVD1Q14C86 1478 aa22.38■■□□□ 1.17
SPTAN1-226ENST00000631315 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
SPTAN1-226ENST00000631315 FBLN2P98095 1184 aa22.36■■□□□ 1.17
SPTAN1-226ENST00000631315 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
SPTAN1-226ENST00000631315 OSCARQ8IYS5 282 aa22.35■■□□□ 1.17
SPTAN1-226ENST00000631315 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
SPTAN1-226ENST00000631315 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
SPTAN1-226ENST00000631315 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
SPTAN1-226ENST00000631315 ABCA5Q8WWZ7 1642 aa22.28■■□□□ 1.16
SPTAN1-226ENST00000631315 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
SPTAN1-226ENST00000631315 KIF27Q86VH2 1401 aa22.22■■□□□ 1.15
SPTAN1-226ENST00000631315 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
SPTAN1-226ENST00000631315 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
SPTAN1-226ENST00000631315 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
SPTAN1-226ENST00000631315 CHD1O14646 1710 aa22.14■■□□□ 1.14
SPTAN1-226ENST00000631315 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
SPTAN1-226ENST00000631315 IGF1RP08069 1367 aa22.12■■□□□ 1.13
SPTAN1-226ENST00000631315 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.13
SPTAN1-226ENST00000631315 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
SPTAN1-226ENST00000631315 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
SPTAN1-226ENST00000631315 RUSC2Q8N2Y8 1516 aa22.02■■□□□ 1.12
SPTAN1-226ENST00000631315 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
SPTAN1-226ENST00000631315 CUL7Q14999 1698 aa21.95■■□□□ 1.1
SPTAN1-226ENST00000631315 NUP160Q12769 1436 aa21.93■■□□□ 1.1
SPTAN1-226ENST00000631315 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
SPTAN1-226ENST00000631315 CEP170Q5SW79 1584 aa21.9■■□□□ 1.1
SPTAN1-226ENST00000631315 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.09
SPTAN1-226ENST00000631315 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
SPTAN1-226ENST00000631315 CSRNP3Q8WYN3 585 aa21.87■■□□□ 1.09
SPTAN1-226ENST00000631315 RAPGEF2Q9Y4G8 1499 aa21.85■■□□□ 1.09
SPTAN1-226ENST00000631315 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
SPTAN1-226ENST00000631315 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
SPTAN1-226ENST00000631315 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms