RNA–Protein interactions for RNA: ENST00000629845.1

RPL35-206, Transcript of ribosomal protein L35, humanhuman

TSL 5 BASIC

Gene RPL35, Length 340 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-206ENST00000629845 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
RPL35-206ENST00000629845 ABCC9O60706 1549 aa31.96■■■□□ 2.71
RPL35-206ENST00000629845 DNAJC5BQ9UF47 199 aa31.28■■■□□ 2.6
RPL35-206ENST00000629845 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
RPL35-206ENST00000629845 RB1CC1Q8TDY2 1594 aa29.74■■■□□ 2.35
RPL35-206ENST00000629845 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
RPL35-206ENST00000629845 PABPN1Q86U42 306 aaKnown RBP eCLIP29.58■■■□□ 2.33
RPL35-206ENST00000629845 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
RPL35-206ENST00000629845 NACADO15069 1562 aa29.29■■■□□ 2.28
RPL35-206ENST00000629845 DCAF8L2P0C7V8 631 aa29.25■■■□□ 2.27
RPL35-206ENST00000629845 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
RPL35-206ENST00000629845 DCAF1Q9Y4B6 1507 aa29.15■■■□□ 2.26
RPL35-206ENST00000629845 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
RPL35-206ENST00000629845 BICRAQ9NZM4 1560 aa28.99■■■□□ 2.23
RPL35-206ENST00000629845 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
RPL35-206ENST00000629845 CC2D2AQ9P2K1 1620 aa28.78■■■□□ 2.2
RPL35-206ENST00000629845 SCRIBQ14160 1630 aa28.53■■■□□ 2.16
RPL35-206ENST00000629845 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
RPL35-206ENST00000629845 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
RPL35-206ENST00000629845 CUX2O14529 1486 aa28.04■■■□□ 2.08
RPL35-206ENST00000629845 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
RPL35-206ENST00000629845 ERCC6Q03468 1493 aa27.66■■■□□ 2.02
RPL35-206ENST00000629845 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
RPL35-206ENST00000629845 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
RPL35-206ENST00000629845 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
RPL35-206ENST00000629845 NESP48681 1621 aa27.08■■□□□ 1.93
RPL35-206ENST00000629845 SMARCA2P51531 1590 aa27.06■■□□□ 1.92
RPL35-206ENST00000629845 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
RPL35-206ENST00000629845 THOC2Q8NI27 1593 aaKnown RBP27.04■■□□□ 1.92
RPL35-206ENST00000629845 PEG3Q9GZU2 1588 aa27.01■■□□□ 1.92
RPL35-206ENST00000629845 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
RPL35-206ENST00000629845 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
RPL35-206ENST00000629845 RSF1Q96T23 1441 aaPredicted RBP26.88■■□□□ 1.89
RPL35-206ENST00000629845 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
RPL35-206ENST00000629845 WIZO95785 1651 aa26.85■■□□□ 1.89
RPL35-206ENST00000629845 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
RPL35-206ENST00000629845 TOP2AP11388 1531 aaKnown RBP26.61■■□□□ 1.85
RPL35-206ENST00000629845 LAMC3Q9Y6N6 1575 aa26.58■■□□□ 1.85
RPL35-206ENST00000629845 OSCARQ8IYS5 282 aa26.57■■□□□ 1.84
RPL35-206ENST00000629845 PDS5BQ9NTI5 1447 aa26.48■■□□□ 1.83
RPL35-206ENST00000629845 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
RPL35-206ENST00000629845 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
RPL35-206ENST00000629845 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
RPL35-206ENST00000629845 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
RPL35-206ENST00000629845 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
RPL35-206ENST00000629845 WDR62O43379 1518 aa26.34■■□□□ 1.81
RPL35-206ENST00000629845 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
RPL35-206ENST00000629845 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
RPL35-206ENST00000629845 TRHP20396 242 aaPredicted RBP26.24■■□□□ 1.79
RPL35-206ENST00000629845 CADPSQ9ULU8 1353 aa26.21■■□□□ 1.79
RPL35-206ENST00000629845 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
RPL35-206ENST00000629845 CFTRP13569 1480 aa26.11■■□□□ 1.77
RPL35-206ENST00000629845 CYB5RLQ6IPT4 315 aa26.09■■□□□ 1.77
RPL35-206ENST00000629845 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
RPL35-206ENST00000629845 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
RPL35-206ENST00000629845 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
RPL35-206ENST00000629845 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
RPL35-206ENST00000629845 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
RPL35-206ENST00000629845 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
RPL35-206ENST00000629845 ILDR1Q86SU0 546 aaPredicted RBP25.63■■□□□ 1.69
RPL35-206ENST00000629845 DNMBPQ6XZF7 1577 aa25.57■■□□□ 1.68
RPL35-206ENST00000629845 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
RPL35-206ENST00000629845 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
RPL35-206ENST00000629845 CHD1O14646 1710 aa25.51■■□□□ 1.67
RPL35-206ENST00000629845 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
RPL35-206ENST00000629845 CUX1P39880 1505 aa25.45■■□□□ 1.66
RPL35-206ENST00000629845 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
RPL35-206ENST00000629845 FBLN2P98095 1184 aa25.37■■□□□ 1.65
RPL35-206ENST00000629845 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
RPL35-206ENST00000629845 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
RPL35-206ENST00000629845 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
RPL35-206ENST00000629845 BIVM-ERCC5R4GMW8 1640 aa25.32■■□□□ 1.64
RPL35-206ENST00000629845 SYNJ1O43426 1573 aa25.31■■□□□ 1.64
RPL35-206ENST00000629845 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
RPL35-206ENST00000629845 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
RPL35-206ENST00000629845 AQRO60306 1485 aaKnown RBP eCLIP25.25■■□□□ 1.631e-11■■■■■ 75.8
RPL35-206ENST00000629845 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
RPL35-206ENST00000629845 SOGA1O94964 1423 aa25.22■■□□□ 1.63
RPL35-206ENST00000629845 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
RPL35-206ENST00000629845 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
RPL35-206ENST00000629845 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
RPL35-206ENST00000629845 TDRD9Q8NDG6 1382 aaKnown RBP25.05■■□□□ 1.6
RPL35-206ENST00000629845 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
RPL35-206ENST00000629845 ABCA5Q8WWZ7 1642 aa25■■□□□ 1.59
RPL35-206ENST00000629845 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
RPL35-206ENST00000629845 PBRM1Q86U86 1689 aa24.95■■□□□ 1.58
RPL35-206ENST00000629845 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
RPL35-206ENST00000629845 SNAPC4Q5SXM2 1469 aa24.93■■□□□ 1.58
RPL35-206ENST00000629845 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
RPL35-206ENST00000629845 MAGI1Q96QZ7 1491 aaPredicted RBP24.85■■□□□ 1.57
RPL35-206ENST00000629845 KIF13AQ9H1H9 1805 aa24.84■■□□□ 1.57
RPL35-206ENST00000629845 KIF27Q86VH2 1401 aa24.81■■□□□ 1.56
RPL35-206ENST00000629845 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
RPL35-206ENST00000629845 ADAMTS12P58397 1594 aa24.76■■□□□ 1.55
RPL35-206ENST00000629845 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
RPL35-206ENST00000629845 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
RPL35-206ENST00000629845 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
RPL35-206ENST00000629845 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
RPL35-206ENST00000629845 CUL7Q14999 1698 aa24.66■■□□□ 1.54
RPL35-206ENST00000629845 IGF1RP08069 1367 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms