RNA–Protein interactions for RNA: ENST00000629517.1

AC004461.2-201, humanhuman

BASIC

Gene AC004461.2, Length 803 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004461.2-201ENST00000629517 NISCHQ9Y2I1 1504 aa38.49■■■■□ 3.75
AC004461.2-201ENST00000629517 CCDC180Q9P1Z9 1646 aa34.17■■■■□ 3.06
AC004461.2-201ENST00000629517 ABCC9O60706 1549 aa33.53■■■□□ 2.96
AC004461.2-201ENST00000629517 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
AC004461.2-201ENST00000629517 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
AC004461.2-201ENST00000629517 NACADO15069 1562 aa32.15■■■□□ 2.74
AC004461.2-201ENST00000629517 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
AC004461.2-201ENST00000629517 MYO15BQ96JP2 1530 aa31.91■■■□□ 2.7
AC004461.2-201ENST00000629517 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
AC004461.2-201ENST00000629517 UNC13AQ9UPW8 1703 aa31.5■■■□□ 2.63
AC004461.2-201ENST00000629517 PABPN1Q86U42 306 aaKnown RBP eCLIP31.38■■■□□ 2.61
AC004461.2-201ENST00000629517 BICRAQ9NZM4 1560 aa31.26■■■□□ 2.59
AC004461.2-201ENST00000629517 SCRIBQ14160 1630 aa31.25■■■□□ 2.59
AC004461.2-201ENST00000629517 DNAJC5BQ9UF47 199 aa30.84■■■□□ 2.53
AC004461.2-201ENST00000629517 SHROOM4Q9ULL8 1493 aa30.81■■■□□ 2.52
AC004461.2-201ENST00000629517 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
AC004461.2-201ENST00000629517 CC2D2AQ9P2K1 1620 aa30.31■■■□□ 2.44
AC004461.2-201ENST00000629517 CECR2Q9BXF3 1484 aa30.1■■■□□ 2.41
AC004461.2-201ENST00000629517 SMARCA4P51532 1647 aa29.86■■■□□ 2.37
AC004461.2-201ENST00000629517 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
AC004461.2-201ENST00000629517 ATAD2BQ9ULI0 1458 aa29.72■■■□□ 2.35
AC004461.2-201ENST00000629517 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
AC004461.2-201ENST00000629517 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
AC004461.2-201ENST00000629517 SMARCA2P51531 1590 aa29.64■■■□□ 2.33
AC004461.2-201ENST00000629517 PEG3Q9GZU2 1588 aa29.54■■■□□ 2.32
AC004461.2-201ENST00000629517 HMGXB3Q12766 1538 aa29.5■■■□□ 2.31
AC004461.2-201ENST00000629517 BAZ1BQ9UIG0 1483 aaKnown RBP29.46■■■□□ 2.31
AC004461.2-201ENST00000629517 WIZO95785 1651 aa29.39■■■□□ 2.3
AC004461.2-201ENST00000629517 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
AC004461.2-201ENST00000629517 NESP48681 1621 aa29.03■■■□□ 2.24
AC004461.2-201ENST00000629517 TOP2AP11388 1531 aaKnown RBP29.02■■■□□ 2.24
AC004461.2-201ENST00000629517 LAMC3Q9Y6N6 1575 aa28.88■■■□□ 2.21
AC004461.2-201ENST00000629517 ERCC6Q03468 1493 aa28.86■■■□□ 2.21
AC004461.2-201ENST00000629517 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
AC004461.2-201ENST00000629517 CCDC88BA6NC98 1476 aa28.73■■■□□ 2.19
AC004461.2-201ENST00000629517 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
AC004461.2-201ENST00000629517 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
AC004461.2-201ENST00000629517 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
AC004461.2-201ENST00000629517 CFTRP13569 1480 aa28.65■■■□□ 2.18
AC004461.2-201ENST00000629517 THOC2Q8NI27 1593 aaKnown RBP28.54■■■□□ 2.16
AC004461.2-201ENST00000629517 CUX2O14529 1486 aa28.53■■■□□ 2.16
AC004461.2-201ENST00000629517 FANCD2Q9BXW9 1451 aa28.51■■■□□ 2.15
AC004461.2-201ENST00000629517 CEP164Q9UPV0 1460 aa28.45■■■□□ 2.14
AC004461.2-201ENST00000629517 MRC2Q9UBG0 1479 aa28.41■■■□□ 2.14
AC004461.2-201ENST00000629517 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
AC004461.2-201ENST00000629517 WDR62O43379 1518 aa28.31■■■□□ 2.12
AC004461.2-201ENST00000629517 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
AC004461.2-201ENST00000629517 TOPBP1Q92547 1522 aa28.05■■■□□ 2.08
AC004461.2-201ENST00000629517 ABCC8Q09428 1581 aa28■■■□□ 2.07
AC004461.2-201ENST00000629517 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
AC004461.2-201ENST00000629517 CUX1P39880 1505 aa27.86■■■□□ 2.05
AC004461.2-201ENST00000629517 IFT140Q96RY7 1462 aa27.84■■■□□ 2.05
AC004461.2-201ENST00000629517 POLA1P09884 1462 aaPredicted RBP27.81■■■□□ 2.04
AC004461.2-201ENST00000629517 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
AC004461.2-201ENST00000629517 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.03
AC004461.2-201ENST00000629517 TARBP1Q13395 1621 aaKnown RBP27.74■■■□□ 2.03
AC004461.2-201ENST00000629517 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
AC004461.2-201ENST00000629517 SOGA1O94964 1423 aa27.72■■■□□ 2.03
AC004461.2-201ENST00000629517 DNAJC5Q9H3Z4 198 aa27.71■■■□□ 2.03
AC004461.2-201ENST00000629517 WRNQ14191 1432 aaPredicted RBP eCLIP27.66■■■□□ 2.02
AC004461.2-201ENST00000629517 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.01
AC004461.2-201ENST00000629517 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
AC004461.2-201ENST00000629517 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
AC004461.2-201ENST00000629517 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
AC004461.2-201ENST00000629517 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
AC004461.2-201ENST00000629517 TDRD9Q8NDG6 1382 aaKnown RBP27.58■■■□□ 2.01
AC004461.2-201ENST00000629517 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
AC004461.2-201ENST00000629517 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
AC004461.2-201ENST00000629517 OSCARQ8IYS5 282 aa27.41■■□□□ 1.98
AC004461.2-201ENST00000629517 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
AC004461.2-201ENST00000629517 GRIN2BQ13224 1484 aa27.36■■□□□ 1.97
AC004461.2-201ENST00000629517 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
AC004461.2-201ENST00000629517 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
AC004461.2-201ENST00000629517 FBLN2P98095 1184 aa27.32■■□□□ 1.96
AC004461.2-201ENST00000629517 PBRM1Q86U86 1689 aa27.31■■□□□ 1.96
AC004461.2-201ENST00000629517 CHD1O14646 1710 aa27.3■■□□□ 1.96
AC004461.2-201ENST00000629517 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
AC004461.2-201ENST00000629517 CHMP7Q8WUX9 453 aaPredicted RBP27.21■■□□□ 1.95
AC004461.2-201ENST00000629517 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
AC004461.2-201ENST00000629517 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
AC004461.2-201ENST00000629517 ADAMTS12P58397 1594 aa27.09■■□□□ 1.93
AC004461.2-201ENST00000629517 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
AC004461.2-201ENST00000629517 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
AC004461.2-201ENST00000629517 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
AC004461.2-201ENST00000629517 GRIN2AQ12879 1464 aa27.01■■□□□ 1.91
AC004461.2-201ENST00000629517 IGF1RP08069 1367 aa27■■□□□ 1.91
AC004461.2-201ENST00000629517 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
AC004461.2-201ENST00000629517 RIMBP3CA6NJZ7 1639 aa26.95■■□□□ 1.91
AC004461.2-201ENST00000629517 RIMBP3BA6NNM3 1639 aa26.95■■□□□ 1.91
AC004461.2-201ENST00000629517 RIMBP3Q9UFD9 1639 aa26.95■■□□□ 1.91
AC004461.2-201ENST00000629517 ARHGEF11O15085 1522 aa26.94■■□□□ 1.9
AC004461.2-201ENST00000629517 RUSC2Q8N2Y8 1516 aa26.91■■□□□ 1.9
AC004461.2-201ENST00000629517 CEP170Q5SW79 1584 aa26.89■■□□□ 1.9
AC004461.2-201ENST00000629517 NUP160Q12769 1436 aa26.89■■□□□ 1.89
AC004461.2-201ENST00000629517 CUL7Q14999 1698 aa26.86■■□□□ 1.89
AC004461.2-201ENST00000629517 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
AC004461.2-201ENST00000629517 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
AC004461.2-201ENST00000629517 CYB5RLQ6IPT4 315 aa26.75■■□□□ 1.87
AC004461.2-201ENST00000629517 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
AC004461.2-201ENST00000629517 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms