RNA–Protein interactions for RNA: ENST00000629303.2

UBE2A-209, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 4

Gene UBE2A, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-209ENST00000629303 NISCHQ9Y2I1 1504 aa27.53■■■□□ 2
UBE2A-209ENST00000629303 ABCC9O60706 1549 aa24.91■■□□□ 1.58
UBE2A-209ENST00000629303 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
UBE2A-209ENST00000629303 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
UBE2A-209ENST00000629303 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
UBE2A-209ENST00000629303 NACADO15069 1562 aa23.36■■□□□ 1.33
UBE2A-209ENST00000629303 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
UBE2A-209ENST00000629303 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
UBE2A-209ENST00000629303 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
UBE2A-209ENST00000629303 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
UBE2A-209ENST00000629303 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
UBE2A-209ENST00000629303 ZCCHC6Q5VYS8 1495 aaKnown RBP22.85■■□□□ 1.25
UBE2A-209ENST00000629303 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
UBE2A-209ENST00000629303 SCRIBQ14160 1630 aa22.64■■□□□ 1.22
UBE2A-209ENST00000629303 SHROOM4Q9ULL8 1493 aa22.53■■□□□ 1.2
UBE2A-209ENST00000629303 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
UBE2A-209ENST00000629303 EIF4G1Q04637 1599 aaKnown RBP22.43■■□□□ 1.18
UBE2A-209ENST00000629303 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
UBE2A-209ENST00000629303 NCAPD3P42695 1498 aa21.58■■□□□ 1.05
UBE2A-209ENST00000629303 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
UBE2A-209ENST00000629303 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
UBE2A-209ENST00000629303 DNAJC5Q9H3Z4 198 aa21.51■■□□□ 1.03
UBE2A-209ENST00000629303 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
UBE2A-209ENST00000629303 NESP48681 1621 aa21.44■■□□□ 1.02
UBE2A-209ENST00000629303 CUX2O14529 1486 aa21.42■■□□□ 1.02
UBE2A-209ENST00000629303 SMARCA2P51531 1590 aa21.41■■□□□ 1.02
UBE2A-209ENST00000629303 ERCC6Q03468 1493 aa21.39■■□□□ 1.02
UBE2A-209ENST00000629303 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
UBE2A-209ENST00000629303 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
UBE2A-209ENST00000629303 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
UBE2A-209ENST00000629303 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
UBE2A-209ENST00000629303 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
UBE2A-209ENST00000629303 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
UBE2A-209ENST00000629303 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
UBE2A-209ENST00000629303 WIZO95785 1651 aa21.04■□□□□ 0.96
UBE2A-209ENST00000629303 PDS5BQ9NTI5 1447 aa20.91■□□□□ 0.94
UBE2A-209ENST00000629303 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
UBE2A-209ENST00000629303 WDR62O43379 1518 aa20.87■□□□□ 0.93
UBE2A-209ENST00000629303 MRC2Q9UBG0 1479 aa20.86■□□□□ 0.93
UBE2A-209ENST00000629303 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
UBE2A-209ENST00000629303 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
UBE2A-209ENST00000629303 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
UBE2A-209ENST00000629303 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
UBE2A-209ENST00000629303 CFTRP13569 1480 aa20.69■□□□□ 0.9
UBE2A-209ENST00000629303 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
UBE2A-209ENST00000629303 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
UBE2A-209ENST00000629303 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
UBE2A-209ENST00000629303 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
UBE2A-209ENST00000629303 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
UBE2A-209ENST00000629303 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
UBE2A-209ENST00000629303 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
UBE2A-209ENST00000629303 RIMBP3CA6NJZ7 1639 aa20.3■□□□□ 0.84
UBE2A-209ENST00000629303 RIMBP3BA6NNM3 1639 aa20.3■□□□□ 0.84
UBE2A-209ENST00000629303 RIMBP3Q9UFD9 1639 aa20.3■□□□□ 0.84
UBE2A-209ENST00000629303 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
UBE2A-209ENST00000629303 OSCARQ8IYS5 282 aa20.28■□□□□ 0.84
UBE2A-209ENST00000629303 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
UBE2A-209ENST00000629303 TARBP1Q13395 1621 aaKnown RBP20.23■□□□□ 0.83
UBE2A-209ENST00000629303 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
UBE2A-209ENST00000629303 CHD1O14646 1710 aa20.17■□□□□ 0.82
UBE2A-209ENST00000629303 AQRO60306 1485 aaKnown RBP eCLIP20.15■□□□□ 0.827e-8■■■■□ 22.6
UBE2A-209ENST00000629303 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
UBE2A-209ENST00000629303 RAD54L2Q9Y4B4 1467 aa20.1■□□□□ 0.81
UBE2A-209ENST00000629303 ABCC8Q09428 1581 aa20.09■□□□□ 0.81
UBE2A-209ENST00000629303 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
UBE2A-209ENST00000629303 CUX1P39880 1505 aa20.02■□□□□ 0.79
UBE2A-209ENST00000629303 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
UBE2A-209ENST00000629303 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
UBE2A-209ENST00000629303 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
UBE2A-209ENST00000629303 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
UBE2A-209ENST00000629303 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
UBE2A-209ENST00000629303 SOGA1O94964 1423 aa19.93■□□□□ 0.78
UBE2A-209ENST00000629303 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
UBE2A-209ENST00000629303 FBLN2P98095 1184 aa19.87■□□□□ 0.77
UBE2A-209ENST00000629303 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
UBE2A-209ENST00000629303 MAGI1Q96QZ7 1491 aaPredicted RBP19.81■□□□□ 0.76
UBE2A-209ENST00000629303 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
UBE2A-209ENST00000629303 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
UBE2A-209ENST00000629303 SYNJ1O43426 1573 aa19.78■□□□□ 0.76
UBE2A-209ENST00000629303 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
UBE2A-209ENST00000629303 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
UBE2A-209ENST00000629303 GAPVD1Q14C86 1478 aa19.72■□□□□ 0.75
UBE2A-209ENST00000629303 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
UBE2A-209ENST00000629303 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
UBE2A-209ENST00000629303 ADAMTS12P58397 1594 aa19.66■□□□□ 0.74
UBE2A-209ENST00000629303 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
UBE2A-209ENST00000629303 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
UBE2A-209ENST00000629303 CEP170Q5SW79 1584 aa19.63■□□□□ 0.73
UBE2A-209ENST00000629303 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
UBE2A-209ENST00000629303 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
UBE2A-209ENST00000629303 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
UBE2A-209ENST00000629303 NUP160Q12769 1436 aa19.55■□□□□ 0.72
UBE2A-209ENST00000629303 SHROOM2Q13796 1616 aa19.53■□□□□ 0.72
UBE2A-209ENST00000629303 WRNQ14191 1432 aaPredicted RBP eCLIP19.52■□□□□ 0.72
UBE2A-209ENST00000629303 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
UBE2A-209ENST00000629303 FHAD1B1AJZ9 1412 aa19.44■□□□□ 0.7
UBE2A-209ENST00000629303 RUSC2Q8N2Y8 1516 aa19.4■□□□□ 0.7
UBE2A-209ENST00000629303 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
UBE2A-209ENST00000629303 PRG4Q92954 1404 aaPredicted RBP19.32■□□□□ 0.68
UBE2A-209ENST00000629303 ADCY10Q96PN6 1610 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms