RNA–Protein interactions for RNA: ENST00000628922.1

U3.53-201, humanhuman

BASIC

Gene U3, Length 216 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.53-201ENST00000628922 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
U3.53-201ENST00000628922 NISCHQ9Y2I1 1504 aa11.05□□□□□ -0.64
U3.53-201ENST00000628922 CHIC1Q5VXU3 224 aa11.01□□□□□ -0.65
U3.53-201ENST00000628922 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
U3.53-201ENST00000628922 PHF23Q9BUL5 403 aaPredicted RBP9.9□□□□□ -0.82
U3.53-201ENST00000628922 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
U3.53-201ENST00000628922 POTEDQ86YR6 584 aa9.48□□□□□ -0.89
U3.53-201ENST00000628922 ABCC9O60706 1549 aa9.47□□□□□ -0.89
U3.53-201ENST00000628922 FOXD1Q16676 465 aa9.45□□□□□ -0.9
U3.53-201ENST00000628922 ZCCHC6Q5VYS8 1495 aaKnown RBP9.23□□□□□ -0.93
U3.53-201ENST00000628922 DCAF8L2P0C7V8 631 aa9.21□□□□□ -0.94
U3.53-201ENST00000628922 NACADO15069 1562 aa9.19□□□□□ -0.94
U3.53-201ENST00000628922 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
U3.53-201ENST00000628922 DCAF1Q9Y4B6 1507 aa9.15□□□□□ -0.94
U3.53-201ENST00000628922 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.95
U3.53-201ENST00000628922 MSH5O43196 834 aa9.05□□□□□ -0.96
U3.53-201ENST00000628922 UNC13AQ9UPW8 1703 aa9.02□□□□□ -0.96
U3.53-201ENST00000628922 SCRIBQ14160 1630 aa8.97□□□□□ -0.97
U3.53-201ENST00000628922 BICRAQ9NZM4 1560 aa8.87□□□□□ -0.99
U3.53-201ENST00000628922 PABPN1Q86U42 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
U3.53-201ENST00000628922 SHROOM4Q9ULL8 1493 aa8.8□□□□□ -1
U3.53-201ENST00000628922 PIAS4Q8N2W9 510 aaPredicted RBP8.72□□□□□ -1.01
U3.53-201ENST00000628922 EIF4G1Q04637 1599 aaKnown RBP8.65□□□□□ -1.03
U3.53-201ENST00000628922 CC2D2AQ9P2K1 1620 aa8.59□□□□□ -1.03
U3.53-201ENST00000628922 SMARCA4P51532 1647 aa8.58□□□□□ -1.04
U3.53-201ENST00000628922 CECR2Q9BXF3 1484 aa8.58□□□□□ -1.04
U3.53-201ENST00000628922 BAZ1AQ9NRL2 1556 aaPredicted RBP8.58□□□□□ -1.04
U3.53-201ENST00000628922 DNAJC5BQ9UF47 199 aa8.54□□□□□ -1.04
U3.53-201ENST00000628922 MROH2BQ7Z745 1585 aa8.52□□□□□ -1.04
U3.53-201ENST00000628922 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
U3.53-201ENST00000628922 PPP6R1Q9UPN7 881 aa8.5□□□□□ -1.05
U3.53-201ENST00000628922 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
U3.53-201ENST00000628922 WIZO95785 1651 aa8.47□□□□□ -1.05
U3.53-201ENST00000628922 ATAD2BQ9ULI0 1458 aa8.47□□□□□ -1.05
U3.53-201ENST00000628922 PLPPR3Q6T4P5 718 aa8.45□□□□□ -1.06
U3.53-201ENST00000628922 RSF1Q96T23 1441 aaPredicted RBP8.45□□□□□ -1.06
U3.53-201ENST00000628922 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
U3.53-201ENST00000628922 HMGXB3Q12766 1538 aa8.44□□□□□ -1.06
U3.53-201ENST00000628922 ADRA2BP18089 450 aa8.44□□□□□ -1.06
U3.53-201ENST00000628922 BAZ1BQ9UIG0 1483 aaKnown RBP8.44□□□□□ -1.06
U3.53-201ENST00000628922 TOP2AP11388 1531 aaKnown RBP8.37□□□□□ -1.07
U3.53-201ENST00000628922 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
U3.53-201ENST00000628922 LAMC3Q9Y6N6 1575 aa8.26□□□□□ -1.09
U3.53-201ENST00000628922 CCDC88BA6NC98 1476 aa8.26□□□□□ -1.09
U3.53-201ENST00000628922 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
U3.53-201ENST00000628922 NESP48681 1621 aa8.22□□□□□ -1.09
U3.53-201ENST00000628922 CADPSQ9ULU8 1353 aa8.21□□□□□ -1.1
U3.53-201ENST00000628922 KIF21AQ7Z4S6 1674 aa8.19□□□□□ -1.1
U3.53-201ENST00000628922 CFTRP13569 1480 aa8.18□□□□□ -1.1
U3.53-201ENST00000628922 ERCC6Q03468 1493 aa8.18□□□□□ -1.1
U3.53-201ENST00000628922 PDS5BQ9NTI5 1447 aa8.17□□□□□ -1.1
U3.53-201ENST00000628922 FANCD2Q9BXW9 1451 aa8.13□□□□□ -1.11
U3.53-201ENST00000628922 CEP164Q9UPV0 1460 aa8.13□□□□□ -1.11
U3.53-201ENST00000628922 THOC2Q8NI27 1593 aaKnown RBP8.1□□□□□ -1.11
U3.53-201ENST00000628922 MRC2Q9UBG0 1479 aa8.08□□□□□ -1.12
U3.53-201ENST00000628922 WDR62O43379 1518 aa8.05□□□□□ -1.12
U3.53-201ENST00000628922 CUX2O14529 1486 aa8.04□□□□□ -1.12
U3.53-201ENST00000628922 ABCC8Q09428 1581 aa8.04□□□□□ -1.12
U3.53-201ENST00000628922 DNMBPQ6XZF7 1577 aa8.04□□□□□ -1.12
U3.53-201ENST00000628922 URB2Q14146 1524 aaKnown RBP8.03□□□□□ -1.12
U3.53-201ENST00000628922 TOPBP1Q92547 1522 aa8.01□□□□□ -1.13
U3.53-201ENST00000628922 CUX1P39880 1505 aa7.99□□□□□ -1.13
U3.53-201ENST00000628922 BIVM-ERCC5R4GMW8 1640 aa7.99□□□□□ -1.13
U3.53-201ENST00000628922 WRNQ14191 1432 aaPredicted RBP eCLIP7.98□□□□□ -1.13
U3.53-201ENST00000628922 TOP2BQ02880 1626 aa7.97□□□□□ -1.13
U3.53-201ENST00000628922 DMRT2Q9Y5R5 561 aa7.97□□□□□ -1.13
U3.53-201ENST00000628922 SYNJ1O43426 1573 aa7.97□□□□□ -1.13
U3.53-201ENST00000628922 FGD5Q6ZNL6 1462 aa7.95□□□□□ -1.14
U3.53-201ENST00000628922 CACNB1Q02641 598 aaPredicted RBP7.95□□□□□ -1.14
U3.53-201ENST00000628922 POLA1P09884 1462 aaPredicted RBP7.94□□□□□ -1.14
U3.53-201ENST00000628922 IFT140Q96RY7 1462 aa7.94□□□□□ -1.14
U3.53-201ENST00000628922 TARBP1Q13395 1621 aaKnown RBP7.93□□□□□ -1.14
U3.53-201ENST00000628922 WDR97A6NE52 1622 aa7.92□□□□□ -1.14
U3.53-201ENST00000628922 SOGA1O94964 1423 aa7.92□□□□□ -1.14
U3.53-201ENST00000628922 RAD54L2Q9Y4B4 1467 aa7.91□□□□□ -1.14
U3.53-201ENST00000628922 EIF4G3O43432 1585 aaKnown RBP7.89□□□□□ -1.15
U3.53-201ENST00000628922 PBRM1Q86U86 1689 aa7.88□□□□□ -1.15
U3.53-201ENST00000628922 ABCA10Q8WWZ4 1543 aa7.88□□□□□ -1.15
U3.53-201ENST00000628922 ZNF608Q9ULD9 1512 aaPredicted RBP7.88□□□□□ -1.15
U3.53-201ENST00000628922 TRIM41Q8WV44 630 aa7.87□□□□□ -1.15
U3.53-201ENST00000628922 MAPK8IP2Q13387 824 aaPredicted RBP7.86□□□□□ -1.15
U3.53-201ENST00000628922 ABCA5Q8WWZ7 1642 aa7.85□□□□□ -1.15
U3.53-201ENST00000628922 AQRO60306 1485 aaKnown RBP eCLIP7.85□□□□□ -1.15
U3.53-201ENST00000628922 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.15
U3.53-201ENST00000628922 GAPVD1Q14C86 1478 aa7.84□□□□□ -1.15
U3.53-201ENST00000628922 GRIN2BQ13224 1484 aa7.82□□□□□ -1.16
U3.53-201ENST00000628922 KIF27Q86VH2 1401 aa7.81□□□□□ -1.16
U3.53-201ENST00000628922 CHD1O14646 1710 aa7.81□□□□□ -1.16
U3.53-201ENST00000628922 SCAF1Q9H7N4 1312 aaKnown RBP7.8□□□□□ -1.16
U3.53-201ENST00000628922 SNAPC4Q5SXM2 1469 aa7.8□□□□□ -1.16
U3.53-201ENST00000628922 ERICH3Q5RHP9 1530 aa7.79□□□□□ -1.16
U3.53-201ENST00000628922 MAGI1Q96QZ7 1491 aaPredicted RBP7.79□□□□□ -1.16
U3.53-201ENST00000628922 CUL7Q14999 1698 aa7.78□□□□□ -1.16
U3.53-201ENST00000628922 ADAMTS12P58397 1594 aa7.77□□□□□ -1.17
U3.53-201ENST00000628922 SYNJ2O15056 1496 aa7.75□□□□□ -1.17
U3.53-201ENST00000628922 RUSC2Q8N2Y8 1516 aa7.75□□□□□ -1.17
U3.53-201ENST00000628922 FBLN2P98095 1184 aa7.75□□□□□ -1.17
U3.53-201ENST00000628922 CHMP7Q8WUX9 453 aaPredicted RBP7.75□□□□□ -1.17
U3.53-201ENST00000628922 FHAD1B1AJZ9 1412 aa7.74□□□□□ -1.17
U3.53-201ENST00000628922 EEA1Q15075 1411 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms