RNA–Protein interactions for RNA: ENST00000627895.2

PSMA6-216, Transcript of proteasome subunit alpha 6, humanhuman

TSL 5 BASIC

Gene PSMA6, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-216ENST00000627895 NISCHQ9Y2I1 1504 aa42.78■■■■■ 4.44
PSMA6-216ENST00000627895 CCDC180Q9P1Z9 1646 aa38.35■■■■□ 3.73
PSMA6-216ENST00000627895 ABCC9O60706 1549 aa37.9■■■■□ 3.66
PSMA6-216ENST00000627895 RB1CC1Q8TDY2 1594 aa36.32■■■■□ 3.41
PSMA6-216ENST00000627895 NACADO15069 1562 aa36.15■■■■□ 3.38
PSMA6-216ENST00000627895 DCAF8L2P0C7V8 631 aa35.89■■■■□ 3.34
PSMA6-216ENST00000627895 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
PSMA6-216ENST00000627895 ZCCHC6Q5VYS8 1495 aaKnown RBP35.53■■■■□ 3.28
PSMA6-216ENST00000627895 UNC13AQ9UPW8 1703 aa35.49■■■■□ 3.27
PSMA6-216ENST00000627895 DCAF1Q9Y4B6 1507 aa35.42■■■■□ 3.26
PSMA6-216ENST00000627895 PABPN1Q86U42 306 aaKnown RBP eCLIP35.27■■■■□ 3.244e-6■□□□□ 9.3
PSMA6-216ENST00000627895 DNAJC5BQ9UF47 199 aa35.19■■■■□ 3.22
PSMA6-216ENST00000627895 BICRAQ9NZM4 1560 aa35.18■■■■□ 3.22
PSMA6-216ENST00000627895 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
PSMA6-216ENST00000627895 SCRIBQ14160 1630 aa34.86■■■■□ 3.17
PSMA6-216ENST00000627895 EIF4G1Q04637 1599 aaKnown RBP34.32■■■■□ 3.08
PSMA6-216ENST00000627895 CC2D2AQ9P2K1 1620 aa34.3■■■■□ 3.08
PSMA6-216ENST00000627895 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
PSMA6-216ENST00000627895 SMARCA4P51532 1647 aa33.33■■■□□ 2.93
PSMA6-216ENST00000627895 NCAPD3P42695 1498 aa33.32■■■□□ 2.92
PSMA6-216ENST00000627895 ATAD2BQ9ULI0 1458 aa33.25■■■□□ 2.91
PSMA6-216ENST00000627895 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
PSMA6-216ENST00000627895 BAZ1AQ9NRL2 1556 aaPredicted RBP33.23■■■□□ 2.91
PSMA6-216ENST00000627895 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
PSMA6-216ENST00000627895 PEG3Q9GZU2 1588 aa33.03■■■□□ 2.88
PSMA6-216ENST00000627895 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
PSMA6-216ENST00000627895 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
PSMA6-216ENST00000627895 ERCC6Q03468 1493 aa32.74■■■□□ 2.83
PSMA6-216ENST00000627895 NESP48681 1621 aa32.63■■■□□ 2.81
PSMA6-216ENST00000627895 CUX2O14529 1486 aa32.62■■■□□ 2.81
PSMA6-216ENST00000627895 WIZO95785 1651 aa32.58■■■□□ 2.81
PSMA6-216ENST00000627895 LAMC3Q9Y6N6 1575 aa32.58■■■□□ 2.81
PSMA6-216ENST00000627895 RSF1Q96T23 1441 aaPredicted RBP32.36■■■□□ 2.77
PSMA6-216ENST00000627895 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
PSMA6-216ENST00000627895 THOC2Q8NI27 1593 aaKnown RBP32.32■■■□□ 2.76
PSMA6-216ENST00000627895 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
PSMA6-216ENST00000627895 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
PSMA6-216ENST00000627895 TOP2AP11388 1531 aaKnown RBP32.22■■■□□ 2.75
PSMA6-216ENST00000627895 DNAJC5Q9H3Z4 198 aa32.17■■■□□ 2.74
PSMA6-216ENST00000627895 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
PSMA6-216ENST00000627895 CFTRP13569 1480 aa32.02■■■□□ 2.72
PSMA6-216ENST00000627895 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
PSMA6-216ENST00000627895 WDR62O43379 1518 aa31.95■■■□□ 2.71
PSMA6-216ENST00000627895 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.7
PSMA6-216ENST00000627895 PRDM2Q13029 1718 aa31.84■■■□□ 2.69
PSMA6-216ENST00000627895 CCDC88BA6NC98 1476 aa31.8■■■□□ 2.68
PSMA6-216ENST00000627895 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
PSMA6-216ENST00000627895 ABCC8Q09428 1581 aa31.41■■■□□ 2.62
PSMA6-216ENST00000627895 TOPBP1Q92547 1522 aa31.38■■■□□ 2.61
PSMA6-216ENST00000627895 DNMBPQ6XZF7 1577 aa31.33■■■□□ 2.61
PSMA6-216ENST00000627895 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
PSMA6-216ENST00000627895 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
PSMA6-216ENST00000627895 OSCARQ8IYS5 282 aa31.13■■■□□ 2.57
PSMA6-216ENST00000627895 SUPT5HO00267 1087 aaKnown RBP31.11■■■□□ 2.57
PSMA6-216ENST00000627895 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
PSMA6-216ENST00000627895 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
PSMA6-216ENST00000627895 POLA1P09884 1462 aaPredicted RBP31.08■■■□□ 2.57
PSMA6-216ENST00000627895 AQRO60306 1485 aaKnown RBP eCLIP30.94■■■□□ 2.54
PSMA6-216ENST00000627895 CUX1P39880 1505 aa30.93■■■□□ 2.54
PSMA6-216ENST00000627895 SOGA1O94964 1423 aa30.93■■■□□ 2.54
PSMA6-216ENST00000627895 FGD5Q6ZNL6 1462 aa30.92■■■□□ 2.54
PSMA6-216ENST00000627895 RAD54L2Q9Y4B4 1467 aa30.9■■■□□ 2.54
PSMA6-216ENST00000627895 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
PSMA6-216ENST00000627895 TRIM41Q8WV44 630 aa30.85■■■□□ 2.53
PSMA6-216ENST00000627895 CHD1O14646 1710 aa30.81■■■□□ 2.52
PSMA6-216ENST00000627895 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
PSMA6-216ENST00000627895 RIMBP3CA6NJZ7 1639 aa30.72■■■□□ 2.51
PSMA6-216ENST00000627895 RIMBP3BA6NNM3 1639 aa30.72■■■□□ 2.51
PSMA6-216ENST00000627895 RIMBP3Q9UFD9 1639 aa30.72■■■□□ 2.51
PSMA6-216ENST00000627895 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
PSMA6-216ENST00000627895 SNAPC4Q5SXM2 1469 aa30.66■■■□□ 2.5
PSMA6-216ENST00000627895 FBLN2P98095 1184 aa30.66■■■□□ 2.5
PSMA6-216ENST00000627895 MAGI1Q96QZ7 1491 aaPredicted RBP30.64■■■□□ 2.5
PSMA6-216ENST00000627895 ARHGEF11O15085 1522 aa30.64■■■□□ 2.5
PSMA6-216ENST00000627895 ABCA10Q8WWZ4 1543 aa30.61■■■□□ 2.49
PSMA6-216ENST00000627895 PBRM1Q86U86 1689 aa30.6■■■□□ 2.49
PSMA6-216ENST00000627895 BIVM-ERCC5R4GMW8 1640 aa30.6■■■□□ 2.49
PSMA6-216ENST00000627895 GAPVD1Q14C86 1478 aa30.58■■■□□ 2.49
PSMA6-216ENST00000627895 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
PSMA6-216ENST00000627895 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
PSMA6-216ENST00000627895 ABCA5Q8WWZ7 1642 aa30.55■■■□□ 2.48
PSMA6-216ENST00000627895 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
PSMA6-216ENST00000627895 CHMP7Q8WUX9 453 aaPredicted RBP30.52■■■□□ 2.48
PSMA6-216ENST00000627895 SYNJ1O43426 1573 aa30.5■■■□□ 2.47
PSMA6-216ENST00000627895 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
PSMA6-216ENST00000627895 ARAP1Q96P48 1450 aa30.34■■■□□ 2.45
PSMA6-216ENST00000627895 CYB5RLQ6IPT4 315 aa30.34■■■□□ 2.45
PSMA6-216ENST00000627895 ADAMTS12P58397 1594 aa30.29■■■□□ 2.44
PSMA6-216ENST00000627895 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
PSMA6-216ENST00000627895 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
PSMA6-216ENST00000627895 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
PSMA6-216ENST00000627895 NUP160Q12769 1436 aa30.13■■■□□ 2.41
PSMA6-216ENST00000627895 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
PSMA6-216ENST00000627895 SHROOM2Q13796 1616 aa30■■■□□ 2.39
PSMA6-216ENST00000627895 KIF27Q86VH2 1401 aa29.96■■■□□ 2.39
PSMA6-216ENST00000627895 ERCC6L2Q5T890 1561 aa29.93■■■□□ 2.38
PSMA6-216ENST00000627895 CUL7Q14999 1698 aa29.92■■■□□ 2.38
PSMA6-216ENST00000627895 TRHP20396 242 aaPredicted RBP29.92■■■□□ 2.38
PSMA6-216ENST00000627895 IGF1RP08069 1367 aa29.88■■■□□ 2.37
PSMA6-216ENST00000627895 RUSC2Q8N2Y8 1516 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms