RNA–Protein interactions for RNA: ENST00000627781.2

ZNF544-220, Transcript of zinc finger protein 544, humanhuman

TSL 2 BASIC

Gene ZNF544, Length 383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-220ENST00000627781 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
ZNF544-220ENST00000627781 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
ZNF544-220ENST00000627781 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
ZNF544-220ENST00000627781 ABCC9O60706 1549 aa19.16■□□□□ 0.66
ZNF544-220ENST00000627781 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
ZNF544-220ENST00000627781 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
ZNF544-220ENST00000627781 NACADO15069 1562 aa18.92■□□□□ 0.62
ZNF544-220ENST00000627781 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
ZNF544-220ENST00000627781 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
ZNF544-220ENST00000627781 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
ZNF544-220ENST00000627781 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
ZNF544-220ENST00000627781 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
ZNF544-220ENST00000627781 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
ZNF544-220ENST00000627781 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
ZNF544-220ENST00000627781 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
ZNF544-220ENST00000627781 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
ZNF544-220ENST00000627781 RSF1Q96T23 1441 aaPredicted RBP17.71■□□□□ 0.43
ZNF544-220ENST00000627781 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
ZNF544-220ENST00000627781 MROH2BQ7Z745 1585 aa17.68■□□□□ 0.42
ZNF544-220ENST00000627781 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
ZNF544-220ENST00000627781 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
ZNF544-220ENST00000627781 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
ZNF544-220ENST00000627781 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
ZNF544-220ENST00000627781 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
ZNF544-220ENST00000627781 WIZO95785 1651 aa17.47■□□□□ 0.39
ZNF544-220ENST00000627781 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
ZNF544-220ENST00000627781 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
ZNF544-220ENST00000627781 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
ZNF544-220ENST00000627781 CC2D2AQ9P2K1 1620 aa17.39■□□□□ 0.38
ZNF544-220ENST00000627781 BAZ1BQ9UIG0 1483 aaKnown RBP17.36■□□□□ 0.37
ZNF544-220ENST00000627781 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
ZNF544-220ENST00000627781 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
ZNF544-220ENST00000627781 CFTRP13569 1480 aa16.97■□□□□ 0.31
ZNF544-220ENST00000627781 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
ZNF544-220ENST00000627781 LAMC3Q9Y6N6 1575 aa16.89■□□□□ 0.29
ZNF544-220ENST00000627781 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
ZNF544-220ENST00000627781 PDS5BQ9NTI5 1447 aa16.77■□□□□ 0.27
ZNF544-220ENST00000627781 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
ZNF544-220ENST00000627781 NESP48681 1621 aa16.73■□□□□ 0.27
ZNF544-220ENST00000627781 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
ZNF544-220ENST00000627781 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.269e-6■■■■■ 50.1
ZNF544-220ENST00000627781 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
ZNF544-220ENST00000627781 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
ZNF544-220ENST00000627781 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
ZNF544-220ENST00000627781 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
ZNF544-220ENST00000627781 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
ZNF544-220ENST00000627781 CUX1P39880 1505 aa16.55■□□□□ 0.24
ZNF544-220ENST00000627781 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
ZNF544-220ENST00000627781 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
ZNF544-220ENST00000627781 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
ZNF544-220ENST00000627781 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
ZNF544-220ENST00000627781 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
ZNF544-220ENST00000627781 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
ZNF544-220ENST00000627781 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
ZNF544-220ENST00000627781 WDR62O43379 1518 aa16.45■□□□□ 0.22
ZNF544-220ENST00000627781 EEA1Q15075 1411 aa16.42■□□□□ 0.22
ZNF544-220ENST00000627781 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
ZNF544-220ENST00000627781 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
ZNF544-220ENST00000627781 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
ZNF544-220ENST00000627781 SOGA1O94964 1423 aa16.36■□□□□ 0.21
ZNF544-220ENST00000627781 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
ZNF544-220ENST00000627781 KIF27Q86VH2 1401 aa16.32■□□□□ 0.2
ZNF544-220ENST00000627781 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
ZNF544-220ENST00000627781 CUX2O14529 1486 aa16.3■□□□□ 0.2
ZNF544-220ENST00000627781 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
ZNF544-220ENST00000627781 TARBP1Q13395 1621 aaKnown RBP16.28■□□□□ 0.2
ZNF544-220ENST00000627781 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
ZNF544-220ENST00000627781 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
ZNF544-220ENST00000627781 RUSC2Q8N2Y8 1516 aa16.22■□□□□ 0.19
ZNF544-220ENST00000627781 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
ZNF544-220ENST00000627781 IGF1RP08069 1367 aa16.18■□□□□ 0.18
ZNF544-220ENST00000627781 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
ZNF544-220ENST00000627781 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
ZNF544-220ENST00000627781 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
ZNF544-220ENST00000627781 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
ZNF544-220ENST00000627781 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
ZNF544-220ENST00000627781 KIF21BO75037 1637 aa16.12■□□□□ 0.17
ZNF544-220ENST00000627781 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
ZNF544-220ENST00000627781 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
ZNF544-220ENST00000627781 CUL7Q14999 1698 aa16.09■□□□□ 0.17
ZNF544-220ENST00000627781 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.176e-7■■■■■ 28.4
ZNF544-220ENST00000627781 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
ZNF544-220ENST00000627781 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
ZNF544-220ENST00000627781 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
ZNF544-220ENST00000627781 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
ZNF544-220ENST00000627781 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
ZNF544-220ENST00000627781 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
ZNF544-220ENST00000627781 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
ZNF544-220ENST00000627781 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
ZNF544-220ENST00000627781 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
ZNF544-220ENST00000627781 ADAMTS12P58397 1594 aa15.98■□□□□ 0.15
ZNF544-220ENST00000627781 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
ZNF544-220ENST00000627781 SYNJ2O15056 1496 aa15.95■□□□□ 0.14
ZNF544-220ENST00000627781 UBTFP17480 764 aaKnown RBP15.93■□□□□ 0.14
ZNF544-220ENST00000627781 GRIN2AQ12879 1464 aa15.9■□□□□ 0.14
ZNF544-220ENST00000627781 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
ZNF544-220ENST00000627781 NUP160Q12769 1436 aa15.83■□□□□ 0.12
ZNF544-220ENST00000627781 CEP162Q5TB80 1403 aa15.82■□□□□ 0.12
ZNF544-220ENST00000627781 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
ZNF544-220ENST00000627781 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms