RNA–Protein interactions for RNA: ENST00000627753.1

AC004448.4-201, humanhuman

TSL 5

Gene AC004448.4, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.4-201ENST00000627753 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
AC004448.4-201ENST00000627753 CCDC180Q9P1Z9 1646 aa18.29■□□□□ 0.52
AC004448.4-201ENST00000627753 ABCC9O60706 1549 aa18.25■□□□□ 0.51
AC004448.4-201ENST00000627753 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
AC004448.4-201ENST00000627753 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
AC004448.4-201ENST00000627753 NACADO15069 1562 aa17.2■□□□□ 0.34
AC004448.4-201ENST00000627753 DNAJC5BQ9UF47 199 aa17.16■□□□□ 0.34
AC004448.4-201ENST00000627753 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
AC004448.4-201ENST00000627753 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
AC004448.4-201ENST00000627753 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
AC004448.4-201ENST00000627753 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
AC004448.4-201ENST00000627753 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
AC004448.4-201ENST00000627753 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
AC004448.4-201ENST00000627753 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
AC004448.4-201ENST00000627753 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
AC004448.4-201ENST00000627753 SCRIBQ14160 1630 aa16.56■□□□□ 0.24
AC004448.4-201ENST00000627753 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
AC004448.4-201ENST00000627753 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.23
AC004448.4-201ENST00000627753 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
AC004448.4-201ENST00000627753 CUX2O14529 1486 aa15.84■□□□□ 0.13
AC004448.4-201ENST00000627753 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
AC004448.4-201ENST00000627753 NCAPD3P42695 1498 aa15.78■□□□□ 0.12
AC004448.4-201ENST00000627753 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
AC004448.4-201ENST00000627753 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
AC004448.4-201ENST00000627753 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
AC004448.4-201ENST00000627753 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
AC004448.4-201ENST00000627753 KIF21AQ7Z4S6 1674 aa15.64■□□□□ 0.09
AC004448.4-201ENST00000627753 BAZ1AQ9NRL2 1556 aaPredicted RBP15.64■□□□□ 0.09
AC004448.4-201ENST00000627753 NESP48681 1621 aa15.63■□□□□ 0.09
AC004448.4-201ENST00000627753 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
AC004448.4-201ENST00000627753 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
AC004448.4-201ENST00000627753 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
AC004448.4-201ENST00000627753 LAMC3Q9Y6N6 1575 aa15.59■□□□□ 0.09
AC004448.4-201ENST00000627753 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
AC004448.4-201ENST00000627753 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
AC004448.4-201ENST00000627753 WIZO95785 1651 aa15.38■□□□□ 0.05
AC004448.4-201ENST00000627753 PRDM2Q13029 1718 aa15.32■□□□□ 0.04
AC004448.4-201ENST00000627753 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
AC004448.4-201ENST00000627753 WDR62O43379 1518 aa15.29■□□□□ 0.04
AC004448.4-201ENST00000627753 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
AC004448.4-201ENST00000627753 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
AC004448.4-201ENST00000627753 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
AC004448.4-201ENST00000627753 FANCD2Q9BXW9 1451 aa15.15■□□□□ 0.02
AC004448.4-201ENST00000627753 TOP2AP11388 1531 aaKnown RBP15.1■□□□□ 0.01
AC004448.4-201ENST00000627753 CFTRP13569 1480 aa15.08■□□□□ 0.01
AC004448.4-201ENST00000627753 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
AC004448.4-201ENST00000627753 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
AC004448.4-201ENST00000627753 RIMBP3CA6NJZ7 1639 aa15□□□□□ -0.01
AC004448.4-201ENST00000627753 RIMBP3BA6NNM3 1639 aa15□□□□□ -0.01
AC004448.4-201ENST00000627753 RIMBP3Q9UFD9 1639 aa15□□□□□ -0.01
AC004448.4-201ENST00000627753 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
AC004448.4-201ENST00000627753 CHD1O14646 1710 aa14.96□□□□□ -0.01
AC004448.4-201ENST00000627753 EIF4G3O43432 1585 aaKnown RBP14.91□□□□□ -0.02
AC004448.4-201ENST00000627753 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
AC004448.4-201ENST00000627753 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
AC004448.4-201ENST00000627753 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
AC004448.4-201ENST00000627753 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
AC004448.4-201ENST00000627753 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
AC004448.4-201ENST00000627753 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
AC004448.4-201ENST00000627753 ARHGEF11O15085 1522 aa14.84□□□□□ -0.03
AC004448.4-201ENST00000627753 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
AC004448.4-201ENST00000627753 WDR97A6NE52 1622 aa14.7□□□□□ -0.06
AC004448.4-201ENST00000627753 AQRO60306 1485 aaKnown RBP eCLIP14.69□□□□□ -0.06
AC004448.4-201ENST00000627753 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
AC004448.4-201ENST00000627753 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
AC004448.4-201ENST00000627753 CYB5RLQ6IPT4 315 aa14.66□□□□□ -0.06
AC004448.4-201ENST00000627753 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
AC004448.4-201ENST00000627753 FBLN2P98095 1184 aa14.64□□□□□ -0.07
AC004448.4-201ENST00000627753 SYNJ1O43426 1573 aa14.62□□□□□ -0.07
AC004448.4-201ENST00000627753 RAD54L2Q9Y4B4 1467 aa14.62□□□□□ -0.07
AC004448.4-201ENST00000627753 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
AC004448.4-201ENST00000627753 SOGA1O94964 1423 aa14.59□□□□□ -0.07
AC004448.4-201ENST00000627753 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
AC004448.4-201ENST00000627753 SNAPC4Q5SXM2 1469 aa14.58□□□□□ -0.08
AC004448.4-201ENST00000627753 FGD5Q6ZNL6 1462 aa14.58□□□□□ -0.08
AC004448.4-201ENST00000627753 TDRD9Q8NDG6 1382 aaKnown RBP14.55□□□□□ -0.08
AC004448.4-201ENST00000627753 MAGI1Q96QZ7 1491 aaPredicted RBP14.55□□□□□ -0.08
AC004448.4-201ENST00000627753 CUX1P39880 1505 aa14.54□□□□□ -0.08
AC004448.4-201ENST00000627753 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
AC004448.4-201ENST00000627753 CHMP7Q8WUX9 453 aaPredicted RBP14.49□□□□□ -0.09
AC004448.4-201ENST00000627753 SYNJ2O15056 1496 aa14.49□□□□□ -0.09
AC004448.4-201ENST00000627753 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
AC004448.4-201ENST00000627753 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
AC004448.4-201ENST00000627753 KIF13AQ9H1H9 1805 aa14.41□□□□□ -0.1
AC004448.4-201ENST00000627753 BIVM-ERCC5R4GMW8 1640 aa14.4□□□□□ -0.1
AC004448.4-201ENST00000627753 ABCA10Q8WWZ4 1543 aa14.4□□□□□ -0.1
AC004448.4-201ENST00000627753 ADAMTS12P58397 1594 aa14.37□□□□□ -0.11
AC004448.4-201ENST00000627753 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
AC004448.4-201ENST00000627753 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
AC004448.4-201ENST00000627753 ERCC6L2Q5T890 1561 aa14.34□□□□□ -0.11
AC004448.4-201ENST00000627753 GRIN2AQ12879 1464 aa14.33□□□□□ -0.12
AC004448.4-201ENST00000627753 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
AC004448.4-201ENST00000627753 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
AC004448.4-201ENST00000627753 WRNQ14191 1432 aaPredicted RBP eCLIP14.27□□□□□ -0.12
AC004448.4-201ENST00000627753 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
AC004448.4-201ENST00000627753 NUP160Q12769 1436 aa14.25□□□□□ -0.13
AC004448.4-201ENST00000627753 TSPOAP1O95153 1857 aa14.23□□□□□ -0.13
AC004448.4-201ENST00000627753 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
AC004448.4-201ENST00000627753 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
AC004448.4-201ENST00000627753 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms