RNA–Protein interactions for RNA: ENST00000624242.1

AC116553.3-201, humanhuman

BASIC

Gene AC116553.3, Length 1,800 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116553.3-201ENST00000624242 NISCHQ9Y2I1 1504 aa23.95■■□□□ 1.43
AC116553.3-201ENST00000624242 CCDC180Q9P1Z9 1646 aa21.03■□□□□ 0.96
AC116553.3-201ENST00000624242 AEBP2Q6ZN18 517 aaPredicted RBP20.39■□□□□ 0.86
AC116553.3-201ENST00000624242 ABCC9O60706 1549 aa20.37■□□□□ 0.85
AC116553.3-201ENST00000624242 ZCCHC6Q5VYS8 1495 aaKnown RBP20.04■□□□□ 0.8
AC116553.3-201ENST00000624242 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
AC116553.3-201ENST00000624242 DCAF1Q9Y4B6 1507 aa19.74■□□□□ 0.75
AC116553.3-201ENST00000624242 NACADO15069 1562 aa19.69■□□□□ 0.74
AC116553.3-201ENST00000624242 MYO15BQ96JP2 1530 aa19.65■□□□□ 0.74
AC116553.3-201ENST00000624242 RB1CC1Q8TDY2 1594 aa19.63■□□□□ 0.73
AC116553.3-201ENST00000624242 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
AC116553.3-201ENST00000624242 SHROOM4Q9ULL8 1493 aa19.36■□□□□ 0.69
AC116553.3-201ENST00000624242 UNC13AQ9UPW8 1703 aa19.27■□□□□ 0.68
AC116553.3-201ENST00000624242 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
AC116553.3-201ENST00000624242 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
AC116553.3-201ENST00000624242 BICRAQ9NZM4 1560 aa19.11■□□□□ 0.65
AC116553.3-201ENST00000624242 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
AC116553.3-201ENST00000624242 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
AC116553.3-201ENST00000624242 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
AC116553.3-201ENST00000624242 SMARCA4P51532 1647 aa18.51■□□□□ 0.55
AC116553.3-201ENST00000624242 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
AC116553.3-201ENST00000624242 RSF1Q96T23 1441 aaPredicted RBP18.45■□□□□ 0.54
AC116553.3-201ENST00000624242 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
AC116553.3-201ENST00000624242 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
AC116553.3-201ENST00000624242 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
AC116553.3-201ENST00000624242 WIZO95785 1651 aa18.36■□□□□ 0.53
AC116553.3-201ENST00000624242 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
AC116553.3-201ENST00000624242 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
AC116553.3-201ENST00000624242 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
AC116553.3-201ENST00000624242 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
AC116553.3-201ENST00000624242 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
AC116553.3-201ENST00000624242 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
AC116553.3-201ENST00000624242 TOP2AP11388 1531 aaKnown RBP18.12■□□□□ 0.49
AC116553.3-201ENST00000624242 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
AC116553.3-201ENST00000624242 NESP48681 1621 aa17.77■□□□□ 0.44
AC116553.3-201ENST00000624242 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.43
AC116553.3-201ENST00000624242 CFTRP13569 1480 aa17.69■□□□□ 0.42
AC116553.3-201ENST00000624242 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
AC116553.3-201ENST00000624242 SENP3Q9H4L4 574 aaPredicted RBP17.62■□□□□ 0.41
AC116553.3-201ENST00000624242 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
AC116553.3-201ENST00000624242 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
AC116553.3-201ENST00000624242 KIF21AQ7Z4S6 1674 aa17.51■□□□□ 0.39
AC116553.3-201ENST00000624242 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
AC116553.3-201ENST00000624242 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
AC116553.3-201ENST00000624242 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
AC116553.3-201ENST00000624242 CEP164Q9UPV0 1460 aa17.45■□□□□ 0.38
AC116553.3-201ENST00000624242 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
AC116553.3-201ENST00000624242 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
AC116553.3-201ENST00000624242 CUX1P39880 1505 aa17.35■□□□□ 0.37
AC116553.3-201ENST00000624242 SYNJ1O43426 1573 aa17.34■□□□□ 0.37
AC116553.3-201ENST00000624242 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
AC116553.3-201ENST00000624242 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.36
AC116553.3-201ENST00000624242 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
AC116553.3-201ENST00000624242 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
AC116553.3-201ENST00000624242 WDR62O43379 1518 aa17.26■□□□□ 0.35
AC116553.3-201ENST00000624242 TOP2BQ02880 1626 aa17.25■□□□□ 0.35
AC116553.3-201ENST00000624242 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
AC116553.3-201ENST00000624242 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
AC116553.3-201ENST00000624242 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
AC116553.3-201ENST00000624242 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
AC116553.3-201ENST00000624242 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
AC116553.3-201ENST00000624242 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
AC116553.3-201ENST00000624242 CUX2O14529 1486 aa17.15■□□□□ 0.34
AC116553.3-201ENST00000624242 SOGA1O94964 1423 aa17.11■□□□□ 0.33
AC116553.3-201ENST00000624242 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
AC116553.3-201ENST00000624242 ZNF608Q9ULD9 1512 aaPredicted RBP17.04■□□□□ 0.32
AC116553.3-201ENST00000624242 IFT140Q96RY7 1462 aa17.04■□□□□ 0.32
AC116553.3-201ENST00000624242 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
AC116553.3-201ENST00000624242 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
AC116553.3-201ENST00000624242 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
AC116553.3-201ENST00000624242 WDR97A6NE52 1622 aa17.02■□□□□ 0.32
AC116553.3-201ENST00000624242 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
AC116553.3-201ENST00000624242 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.31
AC116553.3-201ENST00000624242 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
AC116553.3-201ENST00000624242 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
AC116553.3-201ENST00000624242 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
AC116553.3-201ENST00000624242 GAPVD1Q14C86 1478 aa16.92■□□□□ 0.3
AC116553.3-201ENST00000624242 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
AC116553.3-201ENST00000624242 IGF1RP08069 1367 aa16.85■□□□□ 0.29
AC116553.3-201ENST00000624242 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
AC116553.3-201ENST00000624242 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
AC116553.3-201ENST00000624242 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
AC116553.3-201ENST00000624242 SNAPC4Q5SXM2 1469 aa16.82■□□□□ 0.28
AC116553.3-201ENST00000624242 EEA1Q15075 1411 aa16.81■□□□□ 0.28
AC116553.3-201ENST00000624242 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
AC116553.3-201ENST00000624242 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
AC116553.3-201ENST00000624242 ADAMTS12P58397 1594 aa16.75■□□□□ 0.27
AC116553.3-201ENST00000624242 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
AC116553.3-201ENST00000624242 MAGI1Q96QZ7 1491 aaPredicted RBP16.73■□□□□ 0.27
AC116553.3-201ENST00000624242 CUL7Q14999 1698 aa16.72■□□□□ 0.27
AC116553.3-201ENST00000624242 FBLN2P98095 1184 aa16.72■□□□□ 0.27
AC116553.3-201ENST00000624242 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
AC116553.3-201ENST00000624242 LOC105371045A0A1W2PR82 267 aa16.71■□□□□ 0.27
AC116553.3-201ENST00000624242 FHAD1B1AJZ9 1412 aa16.71■□□□□ 0.27
AC116553.3-201ENST00000624242 SYNJ2O15056 1496 aa16.68■□□□□ 0.26
AC116553.3-201ENST00000624242 KIF21BO75037 1637 aa16.67■□□□□ 0.26
AC116553.3-201ENST00000624242 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
AC116553.3-201ENST00000624242 CHD1O14646 1710 aa16.66■□□□□ 0.26
AC116553.3-201ENST00000624242 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
AC116553.3-201ENST00000624242 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms