RNA–Protein interactions for RNA: ENST00000624039.1

AC055811.4-201, humanhuman

BASIC

Gene AC055811.4, Length 1,754 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.4-201ENST00000624039 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
AC055811.4-201ENST00000624039 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
AC055811.4-201ENST00000624039 ABCC9O60706 1549 aa30.36■■■□□ 2.45
AC055811.4-201ENST00000624039 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
AC055811.4-201ENST00000624039 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
AC055811.4-201ENST00000624039 DCAF1Q9Y4B6 1507 aa29.5■■■□□ 2.31
AC055811.4-201ENST00000624039 NACADO15069 1562 aa29.46■■■□□ 2.31
AC055811.4-201ENST00000624039 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.3
AC055811.4-201ENST00000624039 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
AC055811.4-201ENST00000624039 SCRIBQ14160 1630 aa28.89■■■□□ 2.22
AC055811.4-201ENST00000624039 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
AC055811.4-201ENST00000624039 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
AC055811.4-201ENST00000624039 BICRAQ9NZM4 1560 aa28.48■■■□□ 2.15
AC055811.4-201ENST00000624039 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
AC055811.4-201ENST00000624039 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
AC055811.4-201ENST00000624039 EIF4G1Q04637 1599 aaKnown RBP27.7■■■□□ 2.03
AC055811.4-201ENST00000624039 BAZ1AQ9NRL2 1556 aaPredicted RBP27.66■■■□□ 2.02
AC055811.4-201ENST00000624039 SMARCA4P51532 1647 aa27.62■■■□□ 2.01
AC055811.4-201ENST00000624039 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
AC055811.4-201ENST00000624039 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
AC055811.4-201ENST00000624039 RSF1Q96T23 1441 aaPredicted RBP27.42■■□□□ 1.98
AC055811.4-201ENST00000624039 WIZO95785 1651 aa27.34■■□□□ 1.97
AC055811.4-201ENST00000624039 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
AC055811.4-201ENST00000624039 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
AC055811.4-201ENST00000624039 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
AC055811.4-201ENST00000624039 PEG3Q9GZU2 1588 aa27.27■■□□□ 1.96
AC055811.4-201ENST00000624039 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.95
AC055811.4-201ENST00000624039 NCAPD3P42695 1498 aa27.15■■□□□ 1.94
AC055811.4-201ENST00000624039 BAZ1BQ9UIG0 1483 aaKnown RBP27.15■■□□□ 1.94
AC055811.4-201ENST00000624039 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
AC055811.4-201ENST00000624039 TOP2AP11388 1531 aaKnown RBP27.03■■□□□ 1.92
AC055811.4-201ENST00000624039 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
AC055811.4-201ENST00000624039 NESP48681 1621 aa26.43■■□□□ 1.82
AC055811.4-201ENST00000624039 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
AC055811.4-201ENST00000624039 LAMC3Q9Y6N6 1575 aa26.4■■□□□ 1.82
AC055811.4-201ENST00000624039 CFTRP13569 1480 aa26.38■■□□□ 1.81
AC055811.4-201ENST00000624039 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
AC055811.4-201ENST00000624039 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
AC055811.4-201ENST00000624039 KIF21AQ7Z4S6 1674 aa26.16■■□□□ 1.78
AC055811.4-201ENST00000624039 FANCD2Q9BXW9 1451 aa26.16■■□□□ 1.78
AC055811.4-201ENST00000624039 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
AC055811.4-201ENST00000624039 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
AC055811.4-201ENST00000624039 ABCC8Q09428 1581 aa25.98■■□□□ 1.75
AC055811.4-201ENST00000624039 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
AC055811.4-201ENST00000624039 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
AC055811.4-201ENST00000624039 WRNQ14191 1432 aaPredicted RBP eCLIP25.86■■□□□ 1.73
AC055811.4-201ENST00000624039 URB2Q14146 1524 aaKnown RBP25.86■■□□□ 1.73
AC055811.4-201ENST00000624039 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
AC055811.4-201ENST00000624039 CUX1P39880 1505 aa25.82■■□□□ 1.72
AC055811.4-201ENST00000624039 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
AC055811.4-201ENST00000624039 WDR62O43379 1518 aa25.8■■□□□ 1.72
AC055811.4-201ENST00000624039 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
AC055811.4-201ENST00000624039 TOP2BQ02880 1626 aa25.75■■□□□ 1.71
AC055811.4-201ENST00000624039 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
AC055811.4-201ENST00000624039 CHIC1Q5VXU3 224 aa25.68■■□□□ 1.7
AC055811.4-201ENST00000624039 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
AC055811.4-201ENST00000624039 FGD5Q6ZNL6 1462 aa25.66■■□□□ 1.7
AC055811.4-201ENST00000624039 POLA1P09884 1462 aaPredicted RBP25.63■■□□□ 1.69
AC055811.4-201ENST00000624039 CUX2O14529 1486 aa25.56■■□□□ 1.68
AC055811.4-201ENST00000624039 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
AC055811.4-201ENST00000624039 SOGA1O94964 1423 aa25.52■■□□□ 1.68
AC055811.4-201ENST00000624039 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
AC055811.4-201ENST00000624039 TARBP1Q13395 1621 aaKnown RBP25.47■■□□□ 1.67
AC055811.4-201ENST00000624039 WDR97A6NE52 1622 aa25.42■■□□□ 1.66
AC055811.4-201ENST00000624039 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.66
AC055811.4-201ENST00000624039 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
AC055811.4-201ENST00000624039 TDRD9Q8NDG6 1382 aaKnown RBP25.33■■□□□ 1.65
AC055811.4-201ENST00000624039 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
AC055811.4-201ENST00000624039 AQRO60306 1485 aaKnown RBP eCLIP25.28■■□□□ 1.64
AC055811.4-201ENST00000624039 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
AC055811.4-201ENST00000624039 KIF27Q86VH2 1401 aa25.27■■□□□ 1.64
AC055811.4-201ENST00000624039 RUSC2Q8N2Y8 1516 aa25.25■■□□□ 1.63
AC055811.4-201ENST00000624039 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
AC055811.4-201ENST00000624039 PBRM1Q86U86 1689 aa25.21■■□□□ 1.63
AC055811.4-201ENST00000624039 FAM9AQ8IZU1 332 aaPredicted RBP25.21■■□□□ 1.63
AC055811.4-201ENST00000624039 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
AC055811.4-201ENST00000624039 EEA1Q15075 1411 aa25.13■■□□□ 1.61
AC055811.4-201ENST00000624039 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
AC055811.4-201ENST00000624039 SNAPC4Q5SXM2 1469 aa25.08■■□□□ 1.61
AC055811.4-201ENST00000624039 IGF1RP08069 1367 aa25.06■■□□□ 1.6
AC055811.4-201ENST00000624039 CSRNP3Q8WYN3 585 aa25.03■■□□□ 1.6
AC055811.4-201ENST00000624039 CUL7Q14999 1698 aa25.03■■□□□ 1.6
AC055811.4-201ENST00000624039 MAGI1Q96QZ7 1491 aaPredicted RBP25.01■■□□□ 1.59
AC055811.4-201ENST00000624039 ADAMTS12P58397 1594 aa25.01■■□□□ 1.59
AC055811.4-201ENST00000624039 CARMIL1Q5VZK9 1371 aa24.95■■□□□ 1.58
AC055811.4-201ENST00000624039 FHAD1B1AJZ9 1412 aa24.94■■□□□ 1.58
AC055811.4-201ENST00000624039 FBLN2P98095 1184 aa24.94■■□□□ 1.58
AC055811.4-201ENST00000624039 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
AC055811.4-201ENST00000624039 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
AC055811.4-201ENST00000624039 CHD1O14646 1710 aa24.9■■□□□ 1.58
AC055811.4-201ENST00000624039 PRXQ9BXM0 1461 aa24.9■■□□□ 1.58
AC055811.4-201ENST00000624039 CHMP7Q8WUX9 453 aaPredicted RBP24.9■■□□□ 1.58
AC055811.4-201ENST00000624039 RAPGEF2Q9Y4G8 1499 aa24.88■■□□□ 1.57
AC055811.4-201ENST00000624039 KIF21BO75037 1637 aa24.87■■□□□ 1.57
AC055811.4-201ENST00000624039 GRIN2AQ12879 1464 aa24.84■■□□□ 1.57
AC055811.4-201ENST00000624039 GOLGA3Q08378 1498 aa24.78■■□□□ 1.56
AC055811.4-201ENST00000624039 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
AC055811.4-201ENST00000624039 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
AC055811.4-201ENST00000624039 LOC105371045A0A1W2PR82 267 aa24.69■■□□□ 1.54
AC055811.4-201ENST00000624039 CTTNBP2Q8WZ74 1663 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms