RNA–Protein interactions for RNA: ENST00000623556.1

AC027228.3-201, humanhuman

BASIC

Gene AC027228.3, Length 1,266 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027228.3-201ENST00000623556 NISCHQ9Y2I1 1504 aa24.41■■□□□ 1.5
AC027228.3-201ENST00000623556 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
AC027228.3-201ENST00000623556 ABCC9O60706 1549 aa21.13■□□□□ 0.97
AC027228.3-201ENST00000623556 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
AC027228.3-201ENST00000623556 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
AC027228.3-201ENST00000623556 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
AC027228.3-201ENST00000623556 NACADO15069 1562 aa20.3■□□□□ 0.84
AC027228.3-201ENST00000623556 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
AC027228.3-201ENST00000623556 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
AC027228.3-201ENST00000623556 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
AC027228.3-201ENST00000623556 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
AC027228.3-201ENST00000623556 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
AC027228.3-201ENST00000623556 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.76
AC027228.3-201ENST00000623556 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
AC027228.3-201ENST00000623556 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
AC027228.3-201ENST00000623556 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
AC027228.3-201ENST00000623556 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
AC027228.3-201ENST00000623556 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
AC027228.3-201ENST00000623556 CC2D2AQ9P2K1 1620 aa19.07■□□□□ 0.64
AC027228.3-201ENST00000623556 CECR2Q9BXF3 1484 aa19.05■□□□□ 0.64
AC027228.3-201ENST00000623556 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
AC027228.3-201ENST00000623556 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
AC027228.3-201ENST00000623556 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
AC027228.3-201ENST00000623556 ATAD2BQ9ULI0 1458 aa18.81■□□□□ 0.6
AC027228.3-201ENST00000623556 NCAPD3P42695 1498 aa18.77■□□□□ 0.6
AC027228.3-201ENST00000623556 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
AC027228.3-201ENST00000623556 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
AC027228.3-201ENST00000623556 RSF1Q96T23 1441 aaPredicted RBP18.67■□□□□ 0.58
AC027228.3-201ENST00000623556 HMGXB3Q12766 1538 aa18.64■□□□□ 0.58
AC027228.3-201ENST00000623556 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
AC027228.3-201ENST00000623556 WIZO95785 1651 aa18.6■□□□□ 0.57
AC027228.3-201ENST00000623556 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
AC027228.3-201ENST00000623556 SUPT5HO00267 1087 aaKnown RBP18.34■□□□□ 0.53
AC027228.3-201ENST00000623556 NESP48681 1621 aa18.31■□□□□ 0.52
AC027228.3-201ENST00000623556 CADPSQ9ULU8 1353 aa18.26■□□□□ 0.51
AC027228.3-201ENST00000623556 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
AC027228.3-201ENST00000623556 LAMC3Q9Y6N6 1575 aa18.21■□□□□ 0.51
AC027228.3-201ENST00000623556 ERCC6Q03468 1493 aa18.18■□□□□ 0.5
AC027228.3-201ENST00000623556 CFTRP13569 1480 aa18.15■□□□□ 0.5
AC027228.3-201ENST00000623556 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
AC027228.3-201ENST00000623556 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
AC027228.3-201ENST00000623556 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
AC027228.3-201ENST00000623556 CEP164Q9UPV0 1460 aa17.97■□□□□ 0.47
AC027228.3-201ENST00000623556 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
AC027228.3-201ENST00000623556 MRC2Q9UBG0 1479 aa17.94■□□□□ 0.46
AC027228.3-201ENST00000623556 CUX2O14529 1486 aa17.92■□□□□ 0.46
AC027228.3-201ENST00000623556 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
AC027228.3-201ENST00000623556 WDR62O43379 1518 aa17.85■□□□□ 0.45
AC027228.3-201ENST00000623556 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
AC027228.3-201ENST00000623556 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
AC027228.3-201ENST00000623556 ABCC8Q09428 1581 aa17.71■□□□□ 0.43
AC027228.3-201ENST00000623556 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
AC027228.3-201ENST00000623556 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
AC027228.3-201ENST00000623556 CUX1P39880 1505 aa17.66■□□□□ 0.42
AC027228.3-201ENST00000623556 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
AC027228.3-201ENST00000623556 POLA1P09884 1462 aaPredicted RBP17.61■□□□□ 0.41
AC027228.3-201ENST00000623556 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
AC027228.3-201ENST00000623556 WRNQ14191 1432 aaPredicted RBP eCLIP17.59■□□□□ 0.41
AC027228.3-201ENST00000623556 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
AC027228.3-201ENST00000623556 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
AC027228.3-201ENST00000623556 SOGA1O94964 1423 aa17.55■□□□□ 0.4
AC027228.3-201ENST00000623556 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
AC027228.3-201ENST00000623556 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
AC027228.3-201ENST00000623556 TARBP1Q13395 1621 aaKnown RBP17.5■□□□□ 0.39
AC027228.3-201ENST00000623556 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
AC027228.3-201ENST00000623556 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.39
AC027228.3-201ENST00000623556 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
AC027228.3-201ENST00000623556 BIVM-ERCC5R4GMW8 1640 aa17.46■□□□□ 0.39
AC027228.3-201ENST00000623556 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
AC027228.3-201ENST00000623556 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
AC027228.3-201ENST00000623556 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
AC027228.3-201ENST00000623556 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
AC027228.3-201ENST00000623556 DNAJC5Q9H3Z4 198 aa17.33■□□□□ 0.36
AC027228.3-201ENST00000623556 GRIN2BQ13224 1484 aa17.31■□□□□ 0.36
AC027228.3-201ENST00000623556 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
AC027228.3-201ENST00000623556 SNAPC4Q5SXM2 1469 aa17.29■□□□□ 0.36
AC027228.3-201ENST00000623556 ABCA5Q8WWZ7 1642 aa17.29■□□□□ 0.36
AC027228.3-201ENST00000623556 FBLN2P98095 1184 aa17.27■□□□□ 0.36
AC027228.3-201ENST00000623556 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
AC027228.3-201ENST00000623556 MAGI1Q96QZ7 1491 aaPredicted RBP17.24■□□□□ 0.35
AC027228.3-201ENST00000623556 CHMP7Q8WUX9 453 aaPredicted RBP17.22■□□□□ 0.35
AC027228.3-201ENST00000623556 KIF27Q86VH2 1401 aa17.21■□□□□ 0.34
AC027228.3-201ENST00000623556 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
AC027228.3-201ENST00000623556 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
AC027228.3-201ENST00000623556 IGF1RP08069 1367 aa17.17■□□□□ 0.34
AC027228.3-201ENST00000623556 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
AC027228.3-201ENST00000623556 FHAD1B1AJZ9 1412 aa17.14■□□□□ 0.33
AC027228.3-201ENST00000623556 CHD1O14646 1710 aa17.14■□□□□ 0.33
AC027228.3-201ENST00000623556 RUSC2Q8N2Y8 1516 aa17.12■□□□□ 0.33
AC027228.3-201ENST00000623556 ADAMTS12P58397 1594 aa17.12■□□□□ 0.33
AC027228.3-201ENST00000623556 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
AC027228.3-201ENST00000623556 CARMIL1Q5VZK9 1371 aa17.06■□□□□ 0.32
AC027228.3-201ENST00000623556 NUP160Q12769 1436 aa17.02■□□□□ 0.31
AC027228.3-201ENST00000623556 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
AC027228.3-201ENST00000623556 CUL7Q14999 1698 aa17■□□□□ 0.31
AC027228.3-201ENST00000623556 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
AC027228.3-201ENST00000623556 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.31
AC027228.3-201ENST00000623556 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
AC027228.3-201ENST00000623556 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
AC027228.3-201ENST00000623556 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms