RNA–Protein interactions for RNA: ENST00000622489.4

LRRC23-215, Transcript of leucine rich repeat containing 23, humanhuman

TSL 5 BASIC

Gene LRRC23, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-215ENST00000622489 NISCHQ9Y2I1 1504 aa41.17■■■■■ 4.18
LRRC23-215ENST00000622489 CCDC180Q9P1Z9 1646 aa36.29■■■■□ 3.4
LRRC23-215ENST00000622489 ABCC9O60706 1549 aa34.85■■■■□ 3.17
LRRC23-215ENST00000622489 ZCCHC6Q5VYS8 1495 aaKnown RBP34.46■■■■□ 3.11
LRRC23-215ENST00000622489 DCAF8L2P0C7V8 631 aa34.27■■■■□ 3.08
LRRC23-215ENST00000622489 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
LRRC23-215ENST00000622489 NACADO15069 1562 aa33.98■■■■□ 3.03
LRRC23-215ENST00000622489 MYO15BQ96JP2 1530 aa33.96■■■■□ 3.03
LRRC23-215ENST00000622489 RB1CC1Q8TDY2 1594 aa33.86■■■■□ 3.01
LRRC23-215ENST00000622489 SCRIBQ14160 1630 aa33.21■■■□□ 2.91
LRRC23-215ENST00000622489 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
LRRC23-215ENST00000622489 UNC13AQ9UPW8 1703 aa32.94■■■□□ 2.86
LRRC23-215ENST00000622489 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.83
LRRC23-215ENST00000622489 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
LRRC23-215ENST00000622489 CECR2Q9BXF3 1484 aa31.95■■■□□ 2.7
LRRC23-215ENST00000622489 BAZ1AQ9NRL2 1556 aaPredicted RBP31.92■■■□□ 2.7
LRRC23-215ENST00000622489 EIF4G1Q04637 1599 aaKnown RBP31.83■■■□□ 2.69
LRRC23-215ENST00000622489 SMARCA4P51532 1647 aa31.8■■■□□ 2.68
LRRC23-215ENST00000622489 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
LRRC23-215ENST00000622489 MROH2BQ7Z745 1585 aa31.72■■■□□ 2.67
LRRC23-215ENST00000622489 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
LRRC23-215ENST00000622489 SUPT5HO00267 1087 aaKnown RBP31.52■■■□□ 2.64
LRRC23-215ENST00000622489 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.63
LRRC23-215ENST00000622489 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
LRRC23-215ENST00000622489 ATAD2BQ9ULI0 1458 aa31.44■■■□□ 2.62
LRRC23-215ENST00000622489 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
LRRC23-215ENST00000622489 WIZO95785 1651 aa31.41■■■□□ 2.62
LRRC23-215ENST00000622489 NCAPD3P42695 1498 aa31.3■■■□□ 2.6
LRRC23-215ENST00000622489 BAZ1BQ9UIG0 1483 aaKnown RBP31.3■■■□□ 2.6
LRRC23-215ENST00000622489 HMGXB3Q12766 1538 aa31.24■■■□□ 2.59
LRRC23-215ENST00000622489 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
LRRC23-215ENST00000622489 CCDC88BA6NC98 1476 aa30.78■■■□□ 2.52
LRRC23-215ENST00000622489 CADPSQ9ULU8 1353 aa30.47■■■□□ 2.47
LRRC23-215ENST00000622489 CFTRP13569 1480 aa30.42■■■□□ 2.46
LRRC23-215ENST00000622489 LAMC3Q9Y6N6 1575 aa30.4■■■□□ 2.46
LRRC23-215ENST00000622489 NESP48681 1621 aa30.31■■■□□ 2.44
LRRC23-215ENST00000622489 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
LRRC23-215ENST00000622489 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
LRRC23-215ENST00000622489 FANCD2Q9BXW9 1451 aa30.14■■■□□ 2.42
LRRC23-215ENST00000622489 ERCC6Q03468 1493 aa30.09■■■□□ 2.41
LRRC23-215ENST00000622489 CEP164Q9UPV0 1460 aa30.06■■■□□ 2.4
LRRC23-215ENST00000622489 KIF21AQ7Z4S6 1674 aa29.97■■■□□ 2.39
LRRC23-215ENST00000622489 WRNQ14191 1432 aaPredicted RBP eCLIP29.89■■■□□ 2.38
LRRC23-215ENST00000622489 ABCC8Q09428 1581 aa29.89■■■□□ 2.38
LRRC23-215ENST00000622489 MRC2Q9UBG0 1479 aa29.85■■■□□ 2.37
LRRC23-215ENST00000622489 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.35
LRRC23-215ENST00000622489 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
LRRC23-215ENST00000622489 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
LRRC23-215ENST00000622489 CUX1P39880 1505 aa29.73■■■□□ 2.35
LRRC23-215ENST00000622489 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
LRRC23-215ENST00000622489 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
LRRC23-215ENST00000622489 SYNJ1O43426 1573 aa29.7■■■□□ 2.35
LRRC23-215ENST00000622489 TOP2BQ02880 1626 aa29.69■■■□□ 2.34
LRRC23-215ENST00000622489 THOC2Q8NI27 1593 aaKnown RBP29.69■■■□□ 2.34
LRRC23-215ENST00000622489 WDR62O43379 1518 aa29.68■■■□□ 2.34
LRRC23-215ENST00000622489 BIVM-ERCC5R4GMW8 1640 aa29.66■■■□□ 2.34
LRRC23-215ENST00000622489 FGD5Q6ZNL6 1462 aa29.56■■■□□ 2.32
LRRC23-215ENST00000622489 POLA1P09884 1462 aaPredicted RBP29.5■■■□□ 2.31
LRRC23-215ENST00000622489 SOGA1O94964 1423 aa29.44■■■□□ 2.3
LRRC23-215ENST00000622489 CUX2O14529 1486 aa29.42■■■□□ 2.3
LRRC23-215ENST00000622489 IFT140Q96RY7 1462 aa29.39■■■□□ 2.3
LRRC23-215ENST00000622489 RAD54L2Q9Y4B4 1467 aa29.36■■■□□ 2.29
LRRC23-215ENST00000622489 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
LRRC23-215ENST00000622489 TARBP1Q13395 1621 aaKnown RBP29.27■■■□□ 2.28
LRRC23-215ENST00000622489 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
LRRC23-215ENST00000622489 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
LRRC23-215ENST00000622489 WDR97A6NE52 1622 aa29.2■■■□□ 2.27
LRRC23-215ENST00000622489 EEA1Q15075 1411 aa29.19■■■□□ 2.26
LRRC23-215ENST00000622489 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
LRRC23-215ENST00000622489 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
LRRC23-215ENST00000622489 GAPVD1Q14C86 1478 aa29.11■■■□□ 2.25
LRRC23-215ENST00000622489 ZNF608Q9ULD9 1512 aaPredicted RBP29.11■■■□□ 2.25
LRRC23-215ENST00000622489 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
LRRC23-215ENST00000622489 AQRO60306 1485 aaKnown RBP eCLIP29.08■■■□□ 2.25
LRRC23-215ENST00000622489 EIF4G3O43432 1585 aaKnown RBP29.07■■■□□ 2.24
LRRC23-215ENST00000622489 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
LRRC23-215ENST00000622489 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
LRRC23-215ENST00000622489 CSRNP3Q8WYN3 585 aa29■■■□□ 2.23
LRRC23-215ENST00000622489 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
LRRC23-215ENST00000622489 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
LRRC23-215ENST00000622489 IGF1RP08069 1367 aa28.93■■■□□ 2.22
LRRC23-215ENST00000622489 CUL7Q14999 1698 aa28.87■■■□□ 2.21
LRRC23-215ENST00000622489 SNAPC4Q5SXM2 1469 aa28.86■■■□□ 2.21
LRRC23-215ENST00000622489 MAGI1Q96QZ7 1491 aaPredicted RBP28.86■■■□□ 2.21
LRRC23-215ENST00000622489 CARMIL1Q5VZK9 1371 aa28.84■■■□□ 2.21
LRRC23-215ENST00000622489 FHAD1B1AJZ9 1412 aa28.81■■■□□ 2.2
LRRC23-215ENST00000622489 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
LRRC23-215ENST00000622489 PRXQ9BXM0 1461 aa28.77■■■□□ 2.2
LRRC23-215ENST00000622489 RAPGEF2Q9Y4G8 1499 aa28.76■■■□□ 2.19
LRRC23-215ENST00000622489 KIF21BO75037 1637 aa28.76■■■□□ 2.19
LRRC23-215ENST00000622489 SYNJ2O15056 1496 aa28.73■■■□□ 2.19
LRRC23-215ENST00000622489 CHMP7Q8WUX9 453 aaPredicted RBP28.73■■■□□ 2.19
LRRC23-215ENST00000622489 FBLN2P98095 1184 aa28.72■■■□□ 2.19
LRRC23-215ENST00000622489 GOLGA3Q08378 1498 aa28.71■■■□□ 2.19
LRRC23-215ENST00000622489 EHMT2Q96KQ7 1210 aa28.7■■■□□ 2.18
LRRC23-215ENST00000622489 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
LRRC23-215ENST00000622489 GRIN2AQ12879 1464 aa28.63■■■□□ 2.17
LRRC23-215ENST00000622489 LOC105371045A0A1W2PR82 267 aa28.54■■■□□ 2.16
LRRC23-215ENST00000622489 CHD1O14646 1710 aa28.53■■■□□ 2.16
LRRC23-215ENST00000622489 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms